RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
COL11A1-204ENST00000427239 ARHGAP5Q13017 1502 aa23.65■■□□□ 1.38
COL11A1-204ENST00000427239 PREX2Q70Z35 1606 aa23.64■■□□□ 1.38
COL11A1-204ENST00000427239 ITSN2Q9NZM3 1697 aa23.64■■□□□ 1.38
COL11A1-204ENST00000427239 FANCAO15360 1455 aa23.64■■□□□ 1.37
COL11A1-204ENST00000427239 ZNF777Q9ULD5 760 aaPredicted RBP23.62■■□□□ 1.37
COL11A1-204ENST00000427239 CDC42BPBQ9Y5S2 1711 aa23.62■■□□□ 1.37
COL11A1-204ENST00000427239 FGD6Q6ZV73 1430 aa23.62■■□□□ 1.37
COL11A1-204ENST00000427239 NEO1Q92859 1461 aa23.61■■□□□ 1.37
COL11A1-204ENST00000427239 AKNAQ7Z591 1439 aa23.58■■□□□ 1.37
COL11A1-204ENST00000427239 TSPOAP1O95153 1857 aa23.58■■□□□ 1.37
COL11A1-204ENST00000427239 ZNF644Q9H582 1327 aaPredicted RBP23.56■■□□□ 1.36
COL11A1-204ENST00000427239 CFAP74Q9C0B2 1584 aa23.56■■□□□ 1.36
COL11A1-204ENST00000427239 PPRC1Q5VV67 1664 aaKnown RBP23.56■■□□□ 1.36
COL11A1-204ENST00000427239 PLEKHH2Q8IVE3 1493 aa23.55■■□□□ 1.36
COL11A1-204ENST00000427239 RRBP1Q9P2E9 1410 aaKnown RBP23.54■■□□□ 1.36
COL11A1-204ENST00000427239 KIAA1107Q9UPP5 1409 aa23.54■■□□□ 1.36
COL11A1-204ENST00000427239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.53■■□□□ 1.36
COL11A1-204ENST00000427239 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
COL11A1-204ENST00000427239 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
COL11A1-204ENST00000427239 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
COL11A1-204ENST00000427239 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
COL11A1-204ENST00000427239 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
COL11A1-204ENST00000427239 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
COL11A1-204ENST00000427239 SCAPERQ9BY12 1400 aa23.5■■□□□ 1.35
COL11A1-204ENST00000427239 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
COL11A1-204ENST00000427239 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.35
COL11A1-204ENST00000427239 ABCC1P33527 1531 aa23.46■■□□□ 1.35
COL11A1-204ENST00000427239 MBD5Q9P267 1494 aa23.45■■□□□ 1.35
COL11A1-204ENST00000427239 DENND4BO75064 1496 aaPredicted RBP23.45■■□□□ 1.34
COL11A1-204ENST00000427239 ARHGEF12Q9NZN5 1544 aa23.44■■□□□ 1.34
COL11A1-204ENST00000427239 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
COL11A1-204ENST00000427239 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
COL11A1-204ENST00000427239 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
COL11A1-204ENST00000427239 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
COL11A1-204ENST00000427239 RAPGEF3O95398 923 aa23.42■■□□□ 1.34
COL11A1-204ENST00000427239 ZNF518AQ6AHZ1 1483 aa23.41■■□□□ 1.34
COL11A1-204ENST00000427239 TRAPPC8Q9Y2L5 1435 aa23.4■■□□□ 1.34
COL11A1-204ENST00000427239 ARHGEF5Q12774 1597 aa23.4■■□□□ 1.34
COL11A1-204ENST00000427239 POGZQ7Z3K3 1410 aa23.39■■□□□ 1.34
COL11A1-204ENST00000427239 COL17A1Q9UMD9 1497 aaPredicted RBP23.39■■□□□ 1.33
COL11A1-204ENST00000427239 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
COL11A1-204ENST00000427239 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
COL11A1-204ENST00000427239 ABCC5O15440 1437 aa23.36■■□□□ 1.33
COL11A1-204ENST00000427239 DAPK1P53355 1430 aa23.36■■□□□ 1.33
COL11A1-204ENST00000427239 SPAG9O60271 1321 aaKnown RBP23.34■■□□□ 1.33
COL11A1-204ENST00000427239 DNMT1P26358 1616 aaKnown RBP23.34■■□□□ 1.33
COL11A1-204ENST00000427239 ITGAEP38570 1179 aa23.34■■□□□ 1.33
COL11A1-204ENST00000427239 KDM6BO15054 1643 aa23.33■■□□□ 1.33
COL11A1-204ENST00000427239 RTEL1-TNFRSF6BF6WH68 1400 aa23.31■■□□□ 1.32
COL11A1-204ENST00000427239 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
COL11A1-204ENST00000427239 KDM5CP41229 1560 aa23.31■■□□□ 1.32
COL11A1-204ENST00000427239 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
COL11A1-204ENST00000427239 MYT1LQ9UL68 1186 aa23.3■■□□□ 1.32
COL11A1-204ENST00000427239 MLH3Q9UHC1 1453 aa23.29■■□□□ 1.32
COL11A1-204ENST00000427239 MAGI2Q86UL8 1455 aa23.29■■□□□ 1.32
COL11A1-204ENST00000427239 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
COL11A1-204ENST00000427239 CHIC2Q9UKJ5 165 aa23.28■■□□□ 1.32
COL11A1-204ENST00000427239 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
COL11A1-204ENST00000427239 PTPRKQ15262 1439 aa23.27■■□□□ 1.32
COL11A1-204ENST00000427239 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
COL11A1-204ENST00000427239 MAST1Q9Y2H9 1570 aa23.25■■□□□ 1.31
COL11A1-204ENST00000427239 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
COL11A1-204ENST00000427239 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
COL11A1-204ENST00000427239 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
COL11A1-204ENST00000427239 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
COL11A1-204ENST00000427239 ATP7AQ04656 1500 aa23.22■■□□□ 1.31
COL11A1-204ENST00000427239 HECW2Q9P2P5 1572 aa23.22■■□□□ 1.31
COL11A1-204ENST00000427239 ADGRL2O95490 1459 aa23.21■■□□□ 1.31
COL11A1-204ENST00000427239 ZFYVE16Q7Z3T8 1539 aa23.2■■□□□ 1.31
COL11A1-204ENST00000427239 INO80Q9ULG1 1556 aaPredicted RBP23.2■■□□□ 1.31
COL11A1-204ENST00000427239 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
COL11A1-204ENST00000427239 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
COL11A1-204ENST00000427239 YEATS2Q9ULM3 1422 aa23.17■■□□□ 1.3
COL11A1-204ENST00000427239 KIF15Q9NS87 1388 aa23.16■■□□□ 1.3
COL11A1-204ENST00000427239 PLXNC1O60486 1568 aa23.15■■□□□ 1.3
COL11A1-204ENST00000427239 ATP10AO60312 1499 aa23.15■■□□□ 1.3
COL11A1-204ENST00000427239 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
COL11A1-204ENST00000427239 ADGBQ8N7X0 1667 aa23.13■■□□□ 1.29
COL11A1-204ENST00000427239 HFM1A2PYH4 1435 aa23.11■■□□□ 1.29
COL11A1-204ENST00000427239 PCGF6Q9BYE7 350 aa23.11■■□□□ 1.29
COL11A1-204ENST00000427239 DIP2CQ9Y2E4 1556 aa23.1■■□□□ 1.29
COL11A1-204ENST00000427239 DUOX2Q9NRD8 1548 aa23.1■■□□□ 1.29
COL11A1-204ENST00000427239 A2MP01023 1474 aa23.1■■□□□ 1.29
COL11A1-204ENST00000427239 ARHGEF40Q8TER5 1519 aa23.09■■□□□ 1.29
COL11A1-204ENST00000427239 ABCA6Q8N139 1617 aa23.09■■□□□ 1.29
COL11A1-204ENST00000427239 NAIPQ13075 1403 aa23.09■■□□□ 1.29
COL11A1-204ENST00000427239 ANKRD50Q9ULJ7 1429 aa23.07■■□□□ 1.28
COL11A1-204ENST00000427239 REREQ9P2R6 1566 aa23.05■■□□□ 1.28
COL11A1-204ENST00000427239 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
COL11A1-204ENST00000427239 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
COL11A1-204ENST00000427239 ACIN1Q9UKV3 1341 aaKnown RBP23.02■■□□□ 1.28
COL11A1-204ENST00000427239 KIF3BO15066 747 aa23.02■■□□□ 1.28
COL11A1-204ENST00000427239 HRCP23327 699 aa23.01■■□□□ 1.27
COL11A1-204ENST00000427239 AGLP35573 1532 aa23■■□□□ 1.27
COL11A1-204ENST00000427239 ARID4BQ4LE39 1312 aaPredicted RBP22.99■■□□□ 1.27
COL11A1-204ENST00000427239 GCC2Q8IWJ2 1684 aa22.98■■□□□ 1.27
COL11A1-204ENST00000427239 EIF2AK4Q9P2K8 1649 aaKnown RBP22.96■■□□□ 1.27
COL11A1-204ENST00000427239 RAB3GAP2Q9H2M9 1393 aa22.95■■□□□ 1.26
COL11A1-204ENST00000427239 GGT6Q6P531 493 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms