RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 GPATCH8Q9UKJ3 1502 aaKnown RBP33.9■■■■□ 3.02
RPUSD3-205ENST00000427174 ARHGAP5Q13017 1502 aa33.89■■■■□ 3.02
RPUSD3-205ENST00000427174 KANK4Q5T7N3 995 aaPredicted RBP33.89■■■■□ 3.02
RPUSD3-205ENST00000427174 NCOA2Q15596 1464 aa33.87■■■■□ 3.01
RPUSD3-205ENST00000427174 RICTORQ6R327 1708 aa33.86■■■■□ 3.01
RPUSD3-205ENST00000427174 FRMPD1Q5SYB0 1578 aa33.85■■■■□ 3.01
RPUSD3-205ENST00000427174 ITSN2Q9NZM3 1697 aa33.85■■■■□ 3.01
RPUSD3-205ENST00000427174 EFCAB2Q5VUJ9 269 aa33.84■■■■□ 3.01
RPUSD3-205ENST00000427174 CCNB3Q8WWL7 1395 aa33.81■■■■□ 3
RPUSD3-205ENST00000427174 ADGRL1O94910 1474 aa33.81■■■■□ 3
RPUSD3-205ENST00000427174 APLP2Q06481 763 aa33.8■■■■□ 3
RPUSD3-205ENST00000427174 SAMD9LQ8IVG5 1584 aa33.77■■■■□ 3
RPUSD3-205ENST00000427174 DENND4BO75064 1496 aaPredicted RBP33.77■■■■□ 3
RPUSD3-205ENST00000427174 ABCC1P33527 1531 aa33.76■■■■□ 3
RPUSD3-205ENST00000427174 SCAPERQ9BY12 1400 aa33.74■■■□□ 2.99
RPUSD3-205ENST00000427174 RAPGEF3O95398 923 aa33.72■■■□□ 2.99
RPUSD3-205ENST00000427174 POGZQ7Z3K3 1410 aa33.7■■■□□ 2.99
RPUSD3-205ENST00000427174 ARHGEF12Q9NZN5 1544 aa33.7■■■□□ 2.99
RPUSD3-205ENST00000427174 ZMYM4Q5VZL5 1548 aa33.69■■■□□ 2.98
RPUSD3-205ENST00000427174 CFDP1Q9UEE9 299 aaPredicted RBP33.68■■■□□ 2.98
RPUSD3-205ENST00000427174 KDM5CP41229 1560 aa33.64■■■□□ 2.98
RPUSD3-205ENST00000427174 SYCP2Q9BX26 1530 aa33.62■■■□□ 2.97
RPUSD3-205ENST00000427174 ZNF518AQ6AHZ1 1483 aa33.62■■■□□ 2.97
RPUSD3-205ENST00000427174 PLEKHH2Q8IVE3 1493 aa33.62■■■□□ 2.97
RPUSD3-205ENST00000427174 KIAA1107Q9UPP5 1409 aa33.62■■■□□ 2.97
RPUSD3-205ENST00000427174 MYOM3Q5VTT5 1437 aa33.61■■■□□ 2.97
RPUSD3-205ENST00000427174 ZNF777Q9ULD5 760 aaPredicted RBP33.59■■■□□ 2.97
RPUSD3-205ENST00000427174 TRAPPC8Q9Y2L5 1435 aa33.59■■■□□ 2.97
RPUSD3-205ENST00000427174 ZNF644Q9H582 1327 aaPredicted RBP33.56■■■□□ 2.96
RPUSD3-205ENST00000427174 ARHGEF40Q8TER5 1519 aa33.56■■■□□ 2.96
RPUSD3-205ENST00000427174 MAGI2Q86UL8 1455 aa33.56■■■□□ 2.96
RPUSD3-205ENST00000427174 MIA2Q96PC5 1412 aa33.55■■■□□ 2.96
RPUSD3-205ENST00000427174 CAMSAP2Q08AD1 1489 aa33.55■■■□□ 2.96
RPUSD3-205ENST00000427174 MBD5Q9P267 1494 aa33.53■■■□□ 2.96
RPUSD3-205ENST00000427174 HECW2Q9P2P5 1572 aa33.52■■■□□ 2.96
RPUSD3-205ENST00000427174 AFAP1Q8N556 730 aa33.52■■■□□ 2.96
RPUSD3-205ENST00000427174 ZFYVE16Q7Z3T8 1539 aa33.51■■■□□ 2.95
RPUSD3-205ENST00000427174 HNRNPMP52272 730 aaKnown RBP eCLIP33.49■■■□□ 2.95
RPUSD3-205ENST00000427174 MLH3Q9UHC1 1453 aa33.49■■■□□ 2.95
RPUSD3-205ENST00000427174 YEATS2Q9ULM3 1422 aa33.48■■■□□ 2.95
RPUSD3-205ENST00000427174 KIDINS220Q9ULH0 1771 aa33.48■■■□□ 2.95
RPUSD3-205ENST00000427174 ARHGEF5Q12774 1597 aa33.46■■■□□ 2.95
RPUSD3-205ENST00000427174 PTPN23Q9H3S7 1636 aa33.45■■■□□ 2.95
RPUSD3-205ENST00000427174 FGD6Q6ZV73 1430 aa33.45■■■□□ 2.94
RPUSD3-205ENST00000427174 INO80Q9ULG1 1556 aaPredicted RBP33.43■■■□□ 2.94
RPUSD3-205ENST00000427174 ABCA6Q8N139 1617 aa33.42■■■□□ 2.94
RPUSD3-205ENST00000427174 DIP2CQ9Y2E4 1556 aa33.41■■■□□ 2.94
RPUSD3-205ENST00000427174 SIGLEC1Q9BZZ2 1709 aa33.41■■■□□ 2.94
RPUSD3-205ENST00000427174 TCOF1Q13428 1488 aaKnown RBP33.4■■■□□ 2.94
RPUSD3-205ENST00000427174 CCDC141Q6ZP82 1450 aa33.38■■■□□ 2.93
RPUSD3-205ENST00000427174 ATP7AQ04656 1500 aa33.37■■■□□ 2.93
RPUSD3-205ENST00000427174 ATP10AO60312 1499 aa33.35■■■□□ 2.93
RPUSD3-205ENST00000427174 PPARGC1BQ86YN6 1023 aaKnown RBP33.34■■■□□ 2.93
RPUSD3-205ENST00000427174 REREQ9P2R6 1566 aa33.34■■■□□ 2.93
RPUSD3-205ENST00000427174 RSPH4AQ5TD94 716 aa33.33■■■□□ 2.93
RPUSD3-205ENST00000427174 SPAG9O60271 1321 aaKnown RBP33.32■■■□□ 2.93
RPUSD3-205ENST00000427174 CROCC2H7BZ55 1655 aa33.3■■■□□ 2.92
RPUSD3-205ENST00000427174 RTEL1-TNFRSF6BF6WH68 1400 aa33.29■■■□□ 2.92
RPUSD3-205ENST00000427174 C9orf84Q5VXU9 1444 aa33.29■■■□□ 2.92
RPUSD3-205ENST00000427174 MAST1Q9Y2H9 1570 aa33.29■■■□□ 2.92
RPUSD3-205ENST00000427174 DNMT1P26358 1616 aaKnown RBP33.28■■■□□ 2.92
RPUSD3-205ENST00000427174 BCORL1Q5H9F3 1711 aa33.26■■■□□ 2.92
RPUSD3-205ENST00000427174 ADGBQ8N7X0 1667 aa33.26■■■□□ 2.91
RPUSD3-205ENST00000427174 ABCC5O15440 1437 aa33.21■■■□□ 2.91
RPUSD3-205ENST00000427174 ADAMTSL3P82987 1691 aa33.21■■■□□ 2.91
RPUSD3-205ENST00000427174 KDM4FA0A1W2PPD8 638 aa33.21■■■□□ 2.91
RPUSD3-205ENST00000427174 MYT1LQ9UL68 1186 aa33.21■■■□□ 2.91
RPUSD3-205ENST00000427174 PLXNC1O60486 1568 aa33.21■■■□□ 2.91
RPUSD3-205ENST00000427174 SHANK2Q9UPX8 1470 aa33.19■■■□□ 2.9
RPUSD3-205ENST00000427174 AGLP35573 1532 aa33.19■■■□□ 2.9
RPUSD3-205ENST00000427174 DAPK1P53355 1430 aa33.19■■■□□ 2.9
RPUSD3-205ENST00000427174 TSPY4P0CV99 314 aa33.15■■■□□ 2.9
RPUSD3-205ENST00000427174 TSPY10P0CW01 314 aa33.15■■■□□ 2.9
RPUSD3-205ENST00000427174 A2MP01023 1474 aa33.13■■■□□ 2.89
RPUSD3-205ENST00000427174 RRBP1Q9P2E9 1410 aaKnown RBP33.12■■■□□ 2.89
RPUSD3-205ENST00000427174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.12■■■□□ 2.89
RPUSD3-205ENST00000427174 ARID4BQ4LE39 1312 aaPredicted RBP33.11■■■□□ 2.89
RPUSD3-205ENST00000427174 FAM50AQ14320 339 aaKnown RBP33.09■■■□□ 2.89
RPUSD3-205ENST00000427174 MADDQ8WXG6 1647 aa33.08■■■□□ 2.89
RPUSD3-205ENST00000427174 DHX29Q7Z478 1369 aaKnown RBP33.05■■■□□ 2.88
RPUSD3-205ENST00000427174 FER1L4A9Z1Z3 1794 aa33.04■■■□□ 2.88
RPUSD3-205ENST00000427174 ADGRL2O95490 1459 aa33.02■■■□□ 2.88
RPUSD3-205ENST00000427174 PTPRKQ15262 1439 aa33.01■■■□□ 2.87
RPUSD3-205ENST00000427174 RIMS1Q86UR5 1692 aaKnown RBP32.98■■■□□ 2.87
RPUSD3-205ENST00000427174 DUOX2Q9NRD8 1548 aa32.97■■■□□ 2.87
RPUSD3-205ENST00000427174 NCOA1Q15788 1441 aa32.96■■■□□ 2.87
RPUSD3-205ENST00000427174 EIF2AK4Q9P2K8 1649 aaKnown RBP32.96■■■□□ 2.87
RPUSD3-205ENST00000427174 MLECQ14165 292 aa32.95■■■□□ 2.87
RPUSD3-205ENST00000427174 KIF15Q9NS87 1388 aa32.94■■■□□ 2.86
RPUSD3-205ENST00000427174 CHIC2Q9UKJ5 165 aa32.92■■■□□ 2.86
RPUSD3-205ENST00000427174 ANKRD30AQ9BXX3 1397 aa32.92■■■□□ 2.86
RPUSD3-205ENST00000427174 RNF17Q9BXT8 1623 aaKnown RBP32.91■■■□□ 2.86
RPUSD3-205ENST00000427174 PTPRMP28827 1452 aa32.9■■■□□ 2.86
RPUSD3-205ENST00000427174 RRP7BPQ9NSQ0 103 aa32.87■■■□□ 2.85
RPUSD3-205ENST00000427174 ERBINQ96RT1 1412 aa32.86■■■□□ 2.85
RPUSD3-205ENST00000427174 ROCK1Q13464 1354 aa32.86■■■□□ 2.85
RPUSD3-205ENST00000427174 MROH2AA6NES4 1674 aa32.84■■■□□ 2.85
RPUSD3-205ENST00000427174 MROH1Q8NDA8 1641 aa32.84■■■□□ 2.85
RPUSD3-205ENST00000427174 KIF3BO15066 747 aa32.83■■■□□ 2.85
RPUSD3-205ENST00000427174 CLTCQ00610 1675 aaKnown RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms