RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 PPP1R37O75864 691 aa11.06□□□□□ -0.64
LINC02541-201ENST00000427157 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
LINC02541-201ENST00000427157 KIF3CO14782 793 aa11.02□□□□□ -0.65
LINC02541-201ENST00000427157 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
LINC02541-201ENST00000427157 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
LINC02541-201ENST00000427157 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
LINC02541-201ENST00000427157 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
LINC02541-201ENST00000427157 POTEB3A0JP26 581 aa11□□□□□ -0.65
LINC02541-201ENST00000427157 POTEBQ6S5H4 581 aa11□□□□□ -0.65
LINC02541-201ENST00000427157 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
LINC02541-201ENST00000427157 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
LINC02541-201ENST00000427157 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
LINC02541-201ENST00000427157 GPR153Q6NV75 609 aa10.95□□□□□ -0.66
LINC02541-201ENST00000427157 TMC2Q8TDI7 906 aa10.95□□□□□ -0.66
LINC02541-201ENST00000427157 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
LINC02541-201ENST00000427157 ERBB3P21860 1342 aa10.92□□□□□ -0.66
LINC02541-201ENST00000427157 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
LINC02541-201ENST00000427157 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
LINC02541-201ENST00000427157 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
LINC02541-201ENST00000427157 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
LINC02541-201ENST00000427157 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC02541-201ENST00000427157 RYDENQ9NUL5 291 aaKnown RBP10.89□□□□□ -0.67
LINC02541-201ENST00000427157 SLC34A2O95436 690 aa10.85□□□□□ -0.67
LINC02541-201ENST00000427157 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
LINC02541-201ENST00000427157 GTPBP6O43824 516 aaPredicted RBP10.84□□□□□ -0.67
LINC02541-201ENST00000427157 GPHNQ9NQX3 736 aaPredicted RBP10.84□□□□□ -0.67
LINC02541-201ENST00000427157 FOXK1P85037 733 aa10.83□□□□□ -0.68
LINC02541-201ENST00000427157 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
LINC02541-201ENST00000427157 NUDT7P0C024 238 aa10.81□□□□□ -0.68
LINC02541-201ENST00000427157 DSG2Q14126 1118 aa10.81□□□□□ -0.68
LINC02541-201ENST00000427157 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
LINC02541-201ENST00000427157 PLPP6Q8IY26 295 aa10.8□□□□□ -0.68
LINC02541-201ENST00000427157 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
LINC02541-201ENST00000427157 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
LINC02541-201ENST00000427157 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
LINC02541-201ENST00000427157 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
LINC02541-201ENST00000427157 PTCD2Q8WV60 388 aaKnown RBP10.75□□□□□ -0.69
LINC02541-201ENST00000427157 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
LINC02541-201ENST00000427157 LHX6Q9UPM6 363 aa10.75□□□□□ -0.69
LINC02541-201ENST00000427157 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
LINC02541-201ENST00000427157 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
LINC02541-201ENST00000427157 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.69
LINC02541-201ENST00000427157 PDE4AP27815 886 aa10.68□□□□□ -0.7
LINC02541-201ENST00000427157 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC02541-201ENST00000427157 OXER1Q8TDS5 423 aa10.66□□□□□ -0.7
LINC02541-201ENST00000427157 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
LINC02541-201ENST00000427157 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
LINC02541-201ENST00000427157 TBC1D12O60347 775 aa10.65□□□□□ -0.7
LINC02541-201ENST00000427157 POTEEQ6S8J3 1075 aa10.65□□□□□ -0.7
LINC02541-201ENST00000427157 CADPS2Q86UW7 1296 aa10.65□□□□□ -0.7
LINC02541-201ENST00000427157 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
LINC02541-201ENST00000427157 PBX2P40425 430 aa10.63□□□□□ -0.71
LINC02541-201ENST00000427157 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC02541-201ENST00000427157 MFSD10Q14728 455 aa10.63□□□□□ -0.71
LINC02541-201ENST00000427157 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
LINC02541-201ENST00000427157 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
LINC02541-201ENST00000427157 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
LINC02541-201ENST00000427157 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
LINC02541-201ENST00000427157 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
LINC02541-201ENST00000427157 RNF166Q96A37 237 aaPredicted RBP10.56□□□□□ -0.72
LINC02541-201ENST00000427157 ARHGAP33O14559 1287 aa10.55□□□□□ -0.72
LINC02541-201ENST00000427157 PTGER2P43116 358 aa10.55□□□□□ -0.72
LINC02541-201ENST00000427157 EMILIN3Q9NT22 766 aa10.55□□□□□ -0.72
LINC02541-201ENST00000427157 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
LINC02541-201ENST00000427157 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
LINC02541-201ENST00000427157 PSEN2P49810 448 aa10.52□□□□□ -0.73
LINC02541-201ENST00000427157 ZNF454Q8N9F8 522 aa10.52□□□□□ -0.73
LINC02541-201ENST00000427157 EVI5O60447 810 aa10.51□□□□□ -0.73
LINC02541-201ENST00000427157 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
LINC02541-201ENST00000427157 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
LINC02541-201ENST00000427157 FOSBP53539 338 aa10.49□□□□□ -0.73
LINC02541-201ENST00000427157 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
LINC02541-201ENST00000427157 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
LINC02541-201ENST00000427157 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
LINC02541-201ENST00000427157 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
LINC02541-201ENST00000427157 PAXIP1Q6ZW49 1069 aaPredicted RBP10.47□□□□□ -0.73
LINC02541-201ENST00000427157 JPH4Q96JJ6 628 aa10.47□□□□□ -0.73
LINC02541-201ENST00000427157 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
LINC02541-201ENST00000427157 TK2O00142 265 aa10.45□□□□□ -0.74
LINC02541-201ENST00000427157 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
LINC02541-201ENST00000427157 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
LINC02541-201ENST00000427157 DPYSL4O14531 572 aa10.42□□□□□ -0.74
LINC02541-201ENST00000427157 HRO43593 1189 aa10.42□□□□□ -0.74
LINC02541-201ENST00000427157 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
LINC02541-201ENST00000427157 ADAM33Q9BZ11 813 aa10.41□□□□□ -0.74
LINC02541-201ENST00000427157 PTPREP23469 700 aa10.4□□□□□ -0.74
LINC02541-201ENST00000427157 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
LINC02541-201ENST00000427157 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
LINC02541-201ENST00000427157 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
LINC02541-201ENST00000427157 PHF14O94880 888 aa10.34□□□□□ -0.75
LINC02541-201ENST00000427157 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
LINC02541-201ENST00000427157 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
LINC02541-201ENST00000427157 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
LINC02541-201ENST00000427157 PDIA6Q15084 440 aa10.31□□□□□ -0.76
LINC02541-201ENST00000427157 E2F4Q16254 413 aa10.31□□□□□ -0.76
LINC02541-201ENST00000427157 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
LINC02541-201ENST00000427157 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
LINC02541-201ENST00000427157 DDX12PQ92771 950 aa10.3□□□□□ -0.76
LINC02541-201ENST00000427157 COL9A1P20849 921 aa10.29□□□□□ -0.76
LINC02541-201ENST00000427157 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms