RNA–Protein interactions for RNA: ENST00000426911.2

SRRM1P3-201, Transcript of serine/arginine repetitive matrix 1 pseudogene 3, humanhuman

BASIC

Gene SRRM1P3, Length 2,678 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1P3-201ENST00000426911 TROQ12816 1431 aaPredicted RBP9.06□□□□□ -0.96
SRRM1P3-201ENST00000426911 RAPGEF3O95398 923 aa9.06□□□□□ -0.96
SRRM1P3-201ENST00000426911 TEX14Q8IWB6 1497 aa9.06□□□□□ -0.96
SRRM1P3-201ENST00000426911 CCDC18Q5T9S5 1454 aa9.05□□□□□ -0.96
SRRM1P3-201ENST00000426911 VPS8Q8N3P4 1428 aa9.04□□□□□ -0.96
SRRM1P3-201ENST00000426911 FANCAO15360 1455 aa9.02□□□□□ -0.97
SRRM1P3-201ENST00000426911 MTUS2Q5JR59 1369 aa9.02□□□□□ -0.97
SRRM1P3-201ENST00000426911 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
SRRM1P3-201ENST00000426911 PLCH2O75038 1416 aa9.01□□□□□ -0.97
SRRM1P3-201ENST00000426911 AKNAQ7Z591 1439 aa9.01□□□□□ -0.97
SRRM1P3-201ENST00000426911 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
SRRM1P3-201ENST00000426911 NEO1Q92859 1461 aa8.99□□□□□ -0.97
SRRM1P3-201ENST00000426911 EFCAB2Q5VUJ9 269 aa8.99□□□□□ -0.97
SRRM1P3-201ENST00000426911 ARHGAP5Q13017 1502 aa8.99□□□□□ -0.97
SRRM1P3-201ENST00000426911 ARAP3Q8WWN8 1544 aa8.99□□□□□ -0.97
SRRM1P3-201ENST00000426911 MYO5CQ9NQX4 1742 aa8.98□□□□□ -0.97
SRRM1P3-201ENST00000426911 TIAM1Q13009 1591 aa8.98□□□□□ -0.97
SRRM1P3-201ENST00000426911 SCAPERQ9BY12 1400 aa8.98□□□□□ -0.97
SRRM1P3-201ENST00000426911 CDC42BPBQ9Y5S2 1711 aa8.98□□□□□ -0.97
SRRM1P3-201ENST00000426911 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
SRRM1P3-201ENST00000426911 AFAP1Q8N556 730 aa8.98□□□□□ -0.97
SRRM1P3-201ENST00000426911 ADGRL1O94910 1474 aa8.97□□□□□ -0.97
SRRM1P3-201ENST00000426911 FRMPD1Q5SYB0 1578 aa8.97□□□□□ -0.97
SRRM1P3-201ENST00000426911 PPARGC1BQ86YN6 1023 aaKnown RBP8.97□□□□□ -0.97
SRRM1P3-201ENST00000426911 GPATCH8Q9UKJ3 1502 aaKnown RBP8.97□□□□□ -0.97
SRRM1P3-201ENST00000426911 CDC42BPAQ5VT25 1732 aa8.97□□□□□ -0.97
SRRM1P3-201ENST00000426911 SLC4A2P04920 1241 aa8.97□□□□□ -0.97
SRRM1P3-201ENST00000426911 DENND4BO75064 1496 aaPredicted RBP8.96□□□□□ -0.97
SRRM1P3-201ENST00000426911 SLC4A1APQ9BWU0 796 aaKnown RBP8.96□□□□□ -0.97
SRRM1P3-201ENST00000426911 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
SRRM1P3-201ENST00000426911 LRRC9Q6ZRR7 1453 aa8.96□□□□□ -0.98
SRRM1P3-201ENST00000426911 CFDP1Q9UEE9 299 aaPredicted RBP8.96□□□□□ -0.98
SRRM1P3-201ENST00000426911 ARHGEF12Q9NZN5 1544 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 KDM4FA0A1W2PPD8 638 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 HNRNPMP52272 730 aaKnown RBP eCLIP8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 EHBP1L1Q8N3D4 1523 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 PREX2Q70Z35 1606 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 NCOA2Q15596 1464 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 APLP2Q06481 763 aa8.95□□□□□ -0.98
SRRM1P3-201ENST00000426911 YEATS2Q9ULM3 1422 aa8.94□□□□□ -0.98
SRRM1P3-201ENST00000426911 RICTORQ6R327 1708 aa8.94□□□□□ -0.98
SRRM1P3-201ENST00000426911 TRAPPC8Q9Y2L5 1435 aa8.94□□□□□ -0.98
SRRM1P3-201ENST00000426911 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
SRRM1P3-201ENST00000426911 POGZQ7Z3K3 1410 aa8.93□□□□□ -0.98
SRRM1P3-201ENST00000426911 CFAP74Q9C0B2 1584 aa8.93□□□□□ -0.98
SRRM1P3-201ENST00000426911 SAMD9LQ8IVG5 1584 aa8.92□□□□□ -0.98
SRRM1P3-201ENST00000426911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.92□□□□□ -0.98
SRRM1P3-201ENST00000426911 SUPT6HQ7KZ85 1726 aaKnown RBP8.91□□□□□ -0.98
SRRM1P3-201ENST00000426911 ABCC1P33527 1531 aa8.91□□□□□ -0.98
SRRM1P3-201ENST00000426911 SYCP2Q9BX26 1530 aa8.91□□□□□ -0.98
SRRM1P3-201ENST00000426911 ARID4BQ4LE39 1312 aaPredicted RBP8.91□□□□□ -0.98
SRRM1P3-201ENST00000426911 RNF39Q9H2S5 420 aa8.9□□□□□ -0.98
SRRM1P3-201ENST00000426911 MAP3K1Q13233 1512 aa8.9□□□□□ -0.98
SRRM1P3-201ENST00000426911 MLECQ14165 292 aa8.89□□□□□ -0.99
SRRM1P3-201ENST00000426911 SIGLEC1Q9BZZ2 1709 aa8.89□□□□□ -0.99
SRRM1P3-201ENST00000426911 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
SRRM1P3-201ENST00000426911 ZMYM4Q5VZL5 1548 aa8.88□□□□□ -0.99
SRRM1P3-201ENST00000426911 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
SRRM1P3-201ENST00000426911 ITSN2Q9NZM3 1697 aa8.88□□□□□ -0.99
SRRM1P3-201ENST00000426911 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
SRRM1P3-201ENST00000426911 KDM5CP41229 1560 aa8.87□□□□□ -0.99
SRRM1P3-201ENST00000426911 CAMSAP2Q08AD1 1489 aa8.87□□□□□ -0.99
SRRM1P3-201ENST00000426911 MBD5Q9P267 1494 aa8.87□□□□□ -0.99
SRRM1P3-201ENST00000426911 SPAG9O60271 1321 aaKnown RBP8.87□□□□□ -0.99
SRRM1P3-201ENST00000426911 MYOM3Q5VTT5 1437 aa8.86□□□□□ -0.99
SRRM1P3-201ENST00000426911 KIAA1107Q9UPP5 1409 aa8.85□□□□□ -0.99
SRRM1P3-201ENST00000426911 HECW2Q9P2P5 1572 aa8.85□□□□□ -0.99
SRRM1P3-201ENST00000426911 KIDINS220Q9ULH0 1771 aa8.85□□□□□ -0.99
SRRM1P3-201ENST00000426911 MAGI2Q86UL8 1455 aa8.85□□□□□ -0.99
SRRM1P3-201ENST00000426911 ABCA6Q8N139 1617 aa8.84□□□□□ -0.99
SRRM1P3-201ENST00000426911 ATP10AO60312 1499 aa8.84□□□□□ -0.99
SRRM1P3-201ENST00000426911 MLH3Q9UHC1 1453 aa8.84□□□□□ -0.99
SRRM1P3-201ENST00000426911 ZBTB22O15209 634 aa8.84□□□□□ -0.99
SRRM1P3-201ENST00000426911 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
SRRM1P3-201ENST00000426911 PLEKHH2Q8IVE3 1493 aa8.83□□□□□ -1
SRRM1P3-201ENST00000426911 U3KPZ7 1027 aaPredicted RBP8.83□□□□□ -1
SRRM1P3-201ENST00000426911 C9orf84Q5VXU9 1444 aa8.82□□□□□ -1
SRRM1P3-201ENST00000426911 FGD6Q6ZV73 1430 aa8.82□□□□□ -1
SRRM1P3-201ENST00000426911 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
SRRM1P3-201ENST00000426911 ATP7AQ04656 1500 aa8.81□□□□□ -1
SRRM1P3-201ENST00000426911 MIA2Q96PC5 1412 aa8.81□□□□□ -1
SRRM1P3-201ENST00000426911 CCDC141Q6ZP82 1450 aa8.81□□□□□ -1
SRRM1P3-201ENST00000426911 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
SRRM1P3-201ENST00000426911 BCORL1Q5H9F3 1711 aa8.81□□□□□ -1
SRRM1P3-201ENST00000426911 MADDQ8WXG6 1647 aa8.8□□□□□ -1
SRRM1P3-201ENST00000426911 PTPN23Q9H3S7 1636 aa8.8□□□□□ -1
SRRM1P3-201ENST00000426911 INO80Q9ULG1 1556 aaPredicted RBP8.8□□□□□ -1
SRRM1P3-201ENST00000426911 TSPY4P0CV99 314 aa8.8□□□□□ -1
SRRM1P3-201ENST00000426911 TSPY10P0CW01 314 aa8.8□□□□□ -1
SRRM1P3-201ENST00000426911 CEBPAP49715 358 aaPredicted RBP8.8□□□□□ -1
SRRM1P3-201ENST00000426911 ADAMTSL3P82987 1691 aa8.79□□□□□ -1
SRRM1P3-201ENST00000426911 ABCC5O15440 1437 aa8.79□□□□□ -1
SRRM1P3-201ENST00000426911 ITGAEP38570 1179 aa8.79□□□□□ -1
SRRM1P3-201ENST00000426911 GGT6Q6P531 493 aa8.79□□□□□ -1
SRRM1P3-201ENST00000426911 A2MP01023 1474 aa8.78□□□□□ -1
SRRM1P3-201ENST00000426911 PTPRMP28827 1452 aa8.78□□□□□ -1
SRRM1P3-201ENST00000426911 RRP7BPQ9NSQ0 103 aa8.78□□□□□ -1
SRRM1P3-201ENST00000426911 ARHGEF5Q12774 1597 aa8.78□□□□□ -1
SRRM1P3-201ENST00000426911 RIMS1Q86UR5 1692 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms