RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
SYNC-204ENST00000426909 APLP2Q06481 763 aa16.83■□□□□ 0.28
SYNC-204ENST00000426909 PREX2Q70Z35 1606 aa16.82■□□□□ 0.28
SYNC-204ENST00000426909 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
SYNC-204ENST00000426909 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
SYNC-204ENST00000426909 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
SYNC-204ENST00000426909 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
SYNC-204ENST00000426909 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
SYNC-204ENST00000426909 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
SYNC-204ENST00000426909 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
SYNC-204ENST00000426909 CDC42BPAQ5VT25 1732 aa16.78■□□□□ 0.28
SYNC-204ENST00000426909 POGZQ7Z3K3 1410 aa16.78■□□□□ 0.28
SYNC-204ENST00000426909 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
SYNC-204ENST00000426909 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
SYNC-204ENST00000426909 MAP3K1Q13233 1512 aa16.76■□□□□ 0.27
SYNC-204ENST00000426909 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
SYNC-204ENST00000426909 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
SYNC-204ENST00000426909 ZNF518AQ6AHZ1 1483 aa16.75■□□□□ 0.27
SYNC-204ENST00000426909 MAGI2Q86UL8 1455 aa16.74■□□□□ 0.27
SYNC-204ENST00000426909 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
SYNC-204ENST00000426909 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
SYNC-204ENST00000426909 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
SYNC-204ENST00000426909 ABCC1P33527 1531 aa16.73■□□□□ 0.27
SYNC-204ENST00000426909 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
SYNC-204ENST00000426909 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
SYNC-204ENST00000426909 ZFYVE16Q7Z3T8 1539 aa16.71■□□□□ 0.27
SYNC-204ENST00000426909 KDM4FA0A1W2PPD8 638 aa16.71■□□□□ 0.27
SYNC-204ENST00000426909 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.27
SYNC-204ENST00000426909 NCOA2Q15596 1464 aa16.71■□□□□ 0.27
SYNC-204ENST00000426909 PLEKHH2Q8IVE3 1493 aa16.7■□□□□ 0.26
SYNC-204ENST00000426909 KDM5CP41229 1560 aa16.69■□□□□ 0.26
SYNC-204ENST00000426909 SAMD9LQ8IVG5 1584 aa16.69■□□□□ 0.26
SYNC-204ENST00000426909 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
SYNC-204ENST00000426909 ARHGEF12Q9NZN5 1544 aa16.67■□□□□ 0.26
SYNC-204ENST00000426909 YEATS2Q9ULM3 1422 aa16.67■□□□□ 0.26
SYNC-204ENST00000426909 SYCP2Q9BX26 1530 aa16.66■□□□□ 0.26
SYNC-204ENST00000426909 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
SYNC-204ENST00000426909 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
SYNC-204ENST00000426909 MYT1LQ9UL68 1186 aa16.66■□□□□ 0.26
SYNC-204ENST00000426909 KIAA1107Q9UPP5 1409 aa16.66■□□□□ 0.26
SYNC-204ENST00000426909 TRAPPC8Q9Y2L5 1435 aa16.65■□□□□ 0.26
SYNC-204ENST00000426909 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
SYNC-204ENST00000426909 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
SYNC-204ENST00000426909 ATP10AO60312 1499 aa16.63■□□□□ 0.25
SYNC-204ENST00000426909 HNRNPMP52272 730 aaKnown RBP eCLIP16.62■□□□□ 0.25
SYNC-204ENST00000426909 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
SYNC-204ENST00000426909 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
SYNC-204ENST00000426909 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
SYNC-204ENST00000426909 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
SYNC-204ENST00000426909 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
SYNC-204ENST00000426909 BCORL1Q5H9F3 1711 aa16.59■□□□□ 0.25
SYNC-204ENST00000426909 MYOM3Q5VTT5 1437 aa16.58■□□□□ 0.24
SYNC-204ENST00000426909 ABCA6Q8N139 1617 aa16.58■□□□□ 0.24
SYNC-204ENST00000426909 REREQ9P2R6 1566 aa16.57■□□□□ 0.24
SYNC-204ENST00000426909 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
SYNC-204ENST00000426909 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
SYNC-204ENST00000426909 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
SYNC-204ENST00000426909 ADAMTSL3P82987 1691 aa16.56■□□□□ 0.24
SYNC-204ENST00000426909 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
SYNC-204ENST00000426909 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
SYNC-204ENST00000426909 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
SYNC-204ENST00000426909 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
SYNC-204ENST00000426909 SIGLEC1Q9BZZ2 1709 aa16.54■□□□□ 0.24
SYNC-204ENST00000426909 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
SYNC-204ENST00000426909 MADDQ8WXG6 1647 aa16.52■□□□□ 0.24
SYNC-204ENST00000426909 ARHGEF5Q12774 1597 aa16.52■□□□□ 0.24
SYNC-204ENST00000426909 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
SYNC-204ENST00000426909 MLECQ14165 292 aa16.51■□□□□ 0.23
SYNC-204ENST00000426909 AGLP35573 1532 aa16.5■□□□□ 0.23
SYNC-204ENST00000426909 PTPRMP28827 1452 aa16.5■□□□□ 0.23
SYNC-204ENST00000426909 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
SYNC-204ENST00000426909 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
SYNC-204ENST00000426909 A2MP01023 1474 aa16.48■□□□□ 0.23
SYNC-204ENST00000426909 RIMS1Q86UR5 1692 aaKnown RBP16.47■□□□□ 0.23
SYNC-204ENST00000426909 ADGBQ8N7X0 1667 aa16.47■□□□□ 0.23
SYNC-204ENST00000426909 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
SYNC-204ENST00000426909 CCER1Q8TC90 406 aaPredicted RBP16.47■□□□□ 0.23
SYNC-204ENST00000426909 PTPN23Q9H3S7 1636 aa16.47■□□□□ 0.23
SYNC-204ENST00000426909 FER1L4A9Z1Z3 1794 aa16.46■□□□□ 0.23
SYNC-204ENST00000426909 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
SYNC-204ENST00000426909 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
SYNC-204ENST00000426909 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
SYNC-204ENST00000426909 TCOF1Q13428 1488 aaKnown RBP16.43■□□□□ 0.22
SYNC-204ENST00000426909 DHX29Q7Z478 1369 aaKnown RBP16.41■□□□□ 0.22
SYNC-204ENST00000426909 SHANK2Q9UPX8 1470 aa16.4■□□□□ 0.22
SYNC-204ENST00000426909 CNTLNQ9NXG0 1405 aa16.39■□□□□ 0.21
SYNC-204ENST00000426909 DNMT1P26358 1616 aaKnown RBP16.38■□□□□ 0.21
SYNC-204ENST00000426909 DAPK1P53355 1430 aa16.38■□□□□ 0.21
SYNC-204ENST00000426909 CROCC2H7BZ55 1655 aa16.38■□□□□ 0.21
SYNC-204ENST00000426909 ABCC5O15440 1437 aa16.37■□□□□ 0.21
SYNC-204ENST00000426909 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
SYNC-204ENST00000426909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYNC-204ENST00000426909 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
SYNC-204ENST00000426909 GGT6Q6P531 493 aa16.36■□□□□ 0.21
SYNC-204ENST00000426909 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
SYNC-204ENST00000426909 KIF3BO15066 747 aa16.34■□□□□ 0.21
SYNC-204ENST00000426909 DUOX2Q9NRD8 1548 aa16.33■□□□□ 0.2
SYNC-204ENST00000426909 MROH2AA6NES4 1674 aa16.33■□□□□ 0.2
SYNC-204ENST00000426909 KIF15Q9NS87 1388 aa16.32■□□□□ 0.2
SYNC-204ENST00000426909 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms