RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 PREX2Q70Z35 1606 aa27.36■■□□□ 1.97
LMCD1-204ENST00000426878 SCAPERQ9BY12 1400 aa27.36■■□□□ 1.97
LMCD1-204ENST00000426878 EHBP1L1Q8N3D4 1523 aa27.34■■□□□ 1.97
LMCD1-204ENST00000426878 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
LMCD1-204ENST00000426878 KDM4FA0A1W2PPD8 638 aa27.32■■□□□ 1.96
LMCD1-204ENST00000426878 POGZQ7Z3K3 1410 aa27.31■■□□□ 1.96
LMCD1-204ENST00000426878 TIAM1Q13009 1591 aa27.31■■□□□ 1.96
LMCD1-204ENST00000426878 ZMYM4Q5VZL5 1548 aa27.31■■□□□ 1.96
LMCD1-204ENST00000426878 GPATCH8Q9UKJ3 1502 aaKnown RBP27.31■■□□□ 1.96
LMCD1-204ENST00000426878 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
LMCD1-204ENST00000426878 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
LMCD1-204ENST00000426878 MAGI2Q86UL8 1455 aa27.28■■□□□ 1.96
LMCD1-204ENST00000426878 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
LMCD1-204ENST00000426878 ZNF518AQ6AHZ1 1483 aa27.24■■□□□ 1.95
LMCD1-204ENST00000426878 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
LMCD1-204ENST00000426878 ABCC1P33527 1531 aa27.23■■□□□ 1.95
LMCD1-204ENST00000426878 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
LMCD1-204ENST00000426878 CFDP1Q9UEE9 299 aaPredicted RBP27.21■■□□□ 1.95
LMCD1-204ENST00000426878 KDM5CP41229 1560 aa27.2■■□□□ 1.94
LMCD1-204ENST00000426878 SUPT6HQ7KZ85 1726 aaKnown RBP27.19■■□□□ 1.94
LMCD1-204ENST00000426878 ZFYVE16Q7Z3T8 1539 aa27.19■■□□□ 1.94
LMCD1-204ENST00000426878 ARHGEF12Q9NZN5 1544 aa27.19■■□□□ 1.94
LMCD1-204ENST00000426878 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
LMCD1-204ENST00000426878 NCOA2Q15596 1464 aa27.18■■□□□ 1.94
LMCD1-204ENST00000426878 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
LMCD1-204ENST00000426878 YEATS2Q9ULM3 1422 aa27.17■■□□□ 1.94
LMCD1-204ENST00000426878 ITSN2Q9NZM3 1697 aa27.16■■□□□ 1.94
LMCD1-204ENST00000426878 ZNF777Q9ULD5 760 aaPredicted RBP27.16■■□□□ 1.94
LMCD1-204ENST00000426878 KIAA1107Q9UPP5 1409 aa27.15■■□□□ 1.94
LMCD1-204ENST00000426878 PLEKHH2Q8IVE3 1493 aa27.15■■□□□ 1.94
LMCD1-204ENST00000426878 TRAPPC8Q9Y2L5 1435 aa27.15■■□□□ 1.94
LMCD1-204ENST00000426878 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
LMCD1-204ENST00000426878 MLH3Q9UHC1 1453 aa27.12■■□□□ 1.93
LMCD1-204ENST00000426878 APLP2Q06481 763 aa27.11■■□□□ 1.93
LMCD1-204ENST00000426878 ATP10AO60312 1499 aa27.1■■□□□ 1.93
LMCD1-204ENST00000426878 HECW2Q9P2P5 1572 aa27.1■■□□□ 1.93
LMCD1-204ENST00000426878 SYCP2Q9BX26 1530 aa27.09■■□□□ 1.93
LMCD1-204ENST00000426878 HNRNPMP52272 730 aaKnown RBP eCLIP27.07■■□□□ 1.92
LMCD1-204ENST00000426878 ARID4BQ4LE39 1312 aaPredicted RBP27.06■■□□□ 1.92
LMCD1-204ENST00000426878 ZNF644Q9H582 1327 aaPredicted RBP27.04■■□□□ 1.92
LMCD1-204ENST00000426878 C9orf84Q5VXU9 1444 aa27.04■■□□□ 1.92
LMCD1-204ENST00000426878 BCORL1Q5H9F3 1711 aa27.04■■□□□ 1.92
LMCD1-204ENST00000426878 ADAMTSL3P82987 1691 aa27.04■■□□□ 1.92
LMCD1-204ENST00000426878 MBD5Q9P267 1494 aa27.02■■□□□ 1.92
LMCD1-204ENST00000426878 SIGLEC1Q9BZZ2 1709 aa27.02■■□□□ 1.92
LMCD1-204ENST00000426878 DIP2CQ9Y2E4 1556 aa27.01■■□□□ 1.91
LMCD1-204ENST00000426878 KIDINS220Q9ULH0 1771 aa27.01■■□□□ 1.91
LMCD1-204ENST00000426878 MYT1LQ9UL68 1186 aa27■■□□□ 1.91
LMCD1-204ENST00000426878 REREQ9P2R6 1566 aa27■■□□□ 1.91
LMCD1-204ENST00000426878 SPAG9O60271 1321 aaKnown RBP26.99■■□□□ 1.91
LMCD1-204ENST00000426878 ABCA6Q8N139 1617 aa26.99■■□□□ 1.91
LMCD1-204ENST00000426878 CAMSAP2Q08AD1 1489 aa26.97■■□□□ 1.91
LMCD1-204ENST00000426878 MYOM3Q5VTT5 1437 aa26.96■■□□□ 1.91
LMCD1-204ENST00000426878 RSPH4AQ5TD94 716 aa26.96■■□□□ 1.91
LMCD1-204ENST00000426878 MIA2Q96PC5 1412 aa26.95■■□□□ 1.91
LMCD1-204ENST00000426878 ATP7AQ04656 1500 aa26.93■■□□□ 1.9
LMCD1-204ENST00000426878 INO80Q9ULG1 1556 aaPredicted RBP26.93■■□□□ 1.9
LMCD1-204ENST00000426878 MADDQ8WXG6 1647 aa26.91■■□□□ 1.9
LMCD1-204ENST00000426878 AGLP35573 1532 aa26.91■■□□□ 1.9
LMCD1-204ENST00000426878 RTEL1-TNFRSF6BF6WH68 1400 aa26.91■■□□□ 1.9
LMCD1-204ENST00000426878 ARHGEF5Q12774 1597 aa26.89■■□□□ 1.9
LMCD1-204ENST00000426878 PTPRMP28827 1452 aa26.89■■□□□ 1.9
LMCD1-204ENST00000426878 CCDC141Q6ZP82 1450 aa26.89■■□□□ 1.9
LMCD1-204ENST00000426878 MLECQ14165 292 aa26.85■■□□□ 1.89
LMCD1-204ENST00000426878 A2MP01023 1474 aa26.81■■□□□ 1.88
LMCD1-204ENST00000426878 RIMS1Q86UR5 1692 aaKnown RBP26.81■■□□□ 1.88
LMCD1-204ENST00000426878 PLXNC1O60486 1568 aa26.81■■□□□ 1.88
LMCD1-204ENST00000426878 FER1L4A9Z1Z3 1794 aa26.8■■□□□ 1.88
LMCD1-204ENST00000426878 ADGBQ8N7X0 1667 aa26.8■■□□□ 1.88
LMCD1-204ENST00000426878 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
LMCD1-204ENST00000426878 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
LMCD1-204ENST00000426878 FGD6Q6ZV73 1430 aa26.79■■□□□ 1.88
LMCD1-204ENST00000426878 PTPN23Q9H3S7 1636 aa26.77■■□□□ 1.88
LMCD1-204ENST00000426878 TCOF1Q13428 1488 aaKnown RBP26.75■■□□□ 1.87
LMCD1-204ENST00000426878 MAST1Q9Y2H9 1570 aa26.75■■□□□ 1.87
LMCD1-204ENST00000426878 DHX29Q7Z478 1369 aaKnown RBP26.74■■□□□ 1.87
LMCD1-204ENST00000426878 ABCC5O15440 1437 aa26.67■■□□□ 1.86
LMCD1-204ENST00000426878 CNTLNQ9NXG0 1405 aa26.67■■□□□ 1.86
LMCD1-204ENST00000426878 SHANK2Q9UPX8 1470 aa26.67■■□□□ 1.86
LMCD1-204ENST00000426878 PPP6R1Q9UPN7 881 aa26.66■■□□□ 1.86
LMCD1-204ENST00000426878 ESF1Q9H501 851 aaKnown RBP26.65■■□□□ 1.86
LMCD1-204ENST00000426878 DNMT1P26358 1616 aaKnown RBP26.65■■□□□ 1.86
LMCD1-204ENST00000426878 DAPK1P53355 1430 aa26.63■■□□□ 1.85
LMCD1-204ENST00000426878 CROCC2H7BZ55 1655 aa26.62■■□□□ 1.85
LMCD1-204ENST00000426878 GGT6Q6P531 493 aa26.61■■□□□ 1.85
LMCD1-204ENST00000426878 KIF3BO15066 747 aa26.59■■□□□ 1.85
LMCD1-204ENST00000426878 CEBPAP49715 358 aaPredicted RBP26.59■■□□□ 1.85
LMCD1-204ENST00000426878 MROH2AA6NES4 1674 aa26.59■■□□□ 1.85
LMCD1-204ENST00000426878 PLPPR3Q6T4P5 718 aa26.58■■□□□ 1.85
LMCD1-204ENST00000426878 C3P01024 1663 aa26.57■■□□□ 1.84
LMCD1-204ENST00000426878 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
LMCD1-204ENST00000426878 SETD1BQ9UPS6 1966 aaKnown RBP26.55■■□□□ 1.84
LMCD1-204ENST00000426878 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
LMCD1-204ENST00000426878 FAM50AQ14320 339 aaKnown RBP26.55■■□□□ 1.84
LMCD1-204ENST00000426878 FAM135AQ9P2D6 1515 aa26.54■■□□□ 1.84
LMCD1-204ENST00000426878 ZMYM3Q14202 1370 aa26.54■■□□□ 1.84
LMCD1-204ENST00000426878 KIF15Q9NS87 1388 aa26.53■■□□□ 1.84
LMCD1-204ENST00000426878 EIF2AK4Q9P2K8 1649 aaKnown RBP26.53■■□□□ 1.84
LMCD1-204ENST00000426878 PPARGC1BQ86YN6 1023 aaKnown RBP26.53■■□□□ 1.84
LMCD1-204ENST00000426878 CLTCQ00610 1675 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms