RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 LOC105371045A0A1W2PR82 267 aa35.41■■■■□ 3.26
SEMA3F-205ENST00000426511 ARHGEF40Q8TER5 1519 aa35.38■■■■□ 3.25
SEMA3F-205ENST00000426511 POGZQ7Z3K3 1410 aa35.36■■■■□ 3.25
SEMA3F-205ENST00000426511 ZMYM4Q5VZL5 1548 aa35.34■■■■□ 3.25
SEMA3F-205ENST00000426511 ZFYVE16Q7Z3T8 1539 aa35.32■■■■□ 3.25
SEMA3F-205ENST00000426511 CDC42BPBQ9Y5S2 1711 aa35.31■■■■□ 3.24
SEMA3F-205ENST00000426511 YEATS2Q9ULM3 1422 aa35.31■■■■□ 3.24
SEMA3F-205ENST00000426511 PREX2Q70Z35 1606 aa35.3■■■■□ 3.24
SEMA3F-205ENST00000426511 MAGI2Q86UL8 1455 aa35.26■■■■□ 3.23
SEMA3F-205ENST00000426511 MTUS2Q5JR59 1369 aa35.25■■■■□ 3.23
SEMA3F-205ENST00000426511 MYT1LQ9UL68 1186 aa35.25■■■■□ 3.23
SEMA3F-205ENST00000426511 BCORL1Q5H9F3 1711 aa35.23■■■■□ 3.23
SEMA3F-205ENST00000426511 CDC42BPAQ5VT25 1732 aa35.23■■■■□ 3.23
SEMA3F-205ENST00000426511 ZNF518AQ6AHZ1 1483 aa35.22■■■■□ 3.23
SEMA3F-205ENST00000426511 AFAP1Q8N556 730 aa35.22■■■■□ 3.23
SEMA3F-205ENST00000426511 ADAMTSL3P82987 1691 aa35.21■■■■□ 3.23
SEMA3F-205ENST00000426511 ZNF777Q9ULD5 760 aaPredicted RBP35.21■■■■□ 3.23
SEMA3F-205ENST00000426511 MADDQ8WXG6 1647 aa35.16■■■■□ 3.22
SEMA3F-205ENST00000426511 ABCC1P33527 1531 aa35.16■■■■□ 3.22
SEMA3F-205ENST00000426511 MLECQ14165 292 aa35.14■■■■□ 3.22
SEMA3F-205ENST00000426511 CCNB3Q8WWL7 1395 aa35.13■■■■□ 3.21
SEMA3F-205ENST00000426511 GPATCH8Q9UKJ3 1502 aaKnown RBP35.13■■■■□ 3.21
SEMA3F-205ENST00000426511 SIGLEC1Q9BZZ2 1709 aa35.13■■■■□ 3.21
SEMA3F-205ENST00000426511 PTPRMP28827 1452 aa35.13■■■■□ 3.21
SEMA3F-205ENST00000426511 ATP10AO60312 1499 aa35.12■■■■□ 3.21
SEMA3F-205ENST00000426511 KDM5CP41229 1560 aa35.12■■■■□ 3.21
SEMA3F-205ENST00000426511 ARHGEF12Q9NZN5 1544 aa35.11■■■■□ 3.21
SEMA3F-205ENST00000426511 TRAPPC8Q9Y2L5 1435 aa35.11■■■■□ 3.21
SEMA3F-205ENST00000426511 EHBP1L1Q8N3D4 1523 aa35.11■■■■□ 3.21
SEMA3F-205ENST00000426511 ITSN2Q9NZM3 1697 aa35.11■■■■□ 3.21
SEMA3F-205ENST00000426511 HECW2Q9P2P5 1572 aa35.09■■■■□ 3.21
SEMA3F-205ENST00000426511 C9orf84Q5VXU9 1444 aa35.08■■■■□ 3.21
SEMA3F-205ENST00000426511 CFDP1Q9UEE9 299 aaPredicted RBP35.08■■■■□ 3.21
SEMA3F-205ENST00000426511 RIMS1Q86UR5 1692 aaKnown RBP35.06■■■■□ 3.2
SEMA3F-205ENST00000426511 SAMD9LQ8IVG5 1584 aa35.06■■■■□ 3.2
SEMA3F-205ENST00000426511 PLPPR3Q6T4P5 718 aa35.05■■■■□ 3.2
SEMA3F-205ENST00000426511 VPS8Q8N3P4 1428 aa35.05■■■■□ 3.2
SEMA3F-205ENST00000426511 SYCP2Q9BX26 1530 aa35.02■■■■□ 3.2
SEMA3F-205ENST00000426511 HNRNPMP52272 730 aaKnown RBP eCLIP35.01■■■■□ 3.2
SEMA3F-205ENST00000426511 DIP2CQ9Y2E4 1556 aa35■■■■□ 3.19
SEMA3F-205ENST00000426511 MLH3Q9UHC1 1453 aa35■■■■□ 3.19
SEMA3F-205ENST00000426511 TIAM1Q13009 1591 aa34.99■■■■□ 3.19
SEMA3F-205ENST00000426511 ABCA6Q8N139 1617 aa34.98■■■■□ 3.19
SEMA3F-205ENST00000426511 FER1L4A9Z1Z3 1794 aa34.93■■■■□ 3.18
SEMA3F-205ENST00000426511 PLEKHH2Q8IVE3 1493 aa34.93■■■■□ 3.18
SEMA3F-205ENST00000426511 SUPT6HQ7KZ85 1726 aaKnown RBP34.92■■■■□ 3.18
SEMA3F-205ENST00000426511 KIDINS220Q9ULH0 1771 aa34.9■■■■□ 3.18
SEMA3F-205ENST00000426511 SPAG9O60271 1321 aaKnown RBP34.9■■■■□ 3.18
SEMA3F-205ENST00000426511 ZNF644Q9H582 1327 aaPredicted RBP34.9■■■■□ 3.18
SEMA3F-205ENST00000426511 NCOA2Q15596 1464 aa34.9■■■■□ 3.18
SEMA3F-205ENST00000426511 KIAA1107Q9UPP5 1409 aa34.89■■■■□ 3.18
SEMA3F-205ENST00000426511 REREQ9P2R6 1566 aa34.85■■■■□ 3.17
SEMA3F-205ENST00000426511 LRRC9Q6ZRR7 1453 aa34.83■■■■□ 3.17
SEMA3F-205ENST00000426511 ATP7AQ04656 1500 aa34.8■■■■□ 3.16
SEMA3F-205ENST00000426511 KANK4Q5T7N3 995 aaPredicted RBP34.77■■■■□ 3.16
SEMA3F-205ENST00000426511 AGLP35573 1532 aa34.76■■■■□ 3.15
SEMA3F-205ENST00000426511 INO80Q9ULG1 1556 aaPredicted RBP34.75■■■■□ 3.15
SEMA3F-205ENST00000426511 ESF1Q9H501 851 aaKnown RBP34.75■■■■□ 3.15
SEMA3F-205ENST00000426511 CEBPAP49715 358 aaPredicted RBP34.74■■■■□ 3.15
SEMA3F-205ENST00000426511 APLP2Q06481 763 aa34.74■■■■□ 3.15
SEMA3F-205ENST00000426511 CAMSAP2Q08AD1 1489 aa34.73■■■■□ 3.15
SEMA3F-205ENST00000426511 MBD5Q9P267 1494 aa34.72■■■■□ 3.15
SEMA3F-205ENST00000426511 MAP3K1Q13233 1512 aa34.72■■■■□ 3.15
SEMA3F-205ENST00000426511 LMTK3Q96Q04 1460 aa34.71■■■■□ 3.15
SEMA3F-205ENST00000426511 A2MP01023 1474 aa34.67■■■■□ 3.14
SEMA3F-205ENST00000426511 CCDC141Q6ZP82 1450 aa34.64■■■■□ 3.14
SEMA3F-205ENST00000426511 HSPA2P54652 639 aa34.63■■■■□ 3.13
SEMA3F-205ENST00000426511 ADGBQ8N7X0 1667 aa34.6■■■■□ 3.13
SEMA3F-205ENST00000426511 PLXNC1O60486 1568 aa34.59■■■■□ 3.13
SEMA3F-205ENST00000426511 RTEL1-TNFRSF6BF6WH68 1400 aa34.57■■■■□ 3.13
SEMA3F-205ENST00000426511 RSPH4AQ5TD94 716 aa34.56■■■■□ 3.12
SEMA3F-205ENST00000426511 GGT6Q6P531 493 aa34.56■■■■□ 3.12
SEMA3F-205ENST00000426511 C3P01024 1663 aa34.56■■■■□ 3.12
SEMA3F-205ENST00000426511 MYOM3Q5VTT5 1437 aa34.55■■■■□ 3.12
SEMA3F-205ENST00000426511 CNTLNQ9NXG0 1405 aa34.54■■■■□ 3.12
SEMA3F-205ENST00000426511 TSPY4P0CV99 314 aa34.53■■■■□ 3.12
SEMA3F-205ENST00000426511 TSPY10P0CW01 314 aa34.53■■■■□ 3.12
SEMA3F-205ENST00000426511 PREX1Q8TCU6 1659 aa34.53■■■■□ 3.12
SEMA3F-205ENST00000426511 ARHGEF5Q12774 1597 aa34.52■■■■□ 3.12
SEMA3F-205ENST00000426511 MIA2Q96PC5 1412 aa34.48■■■■□ 3.11
SEMA3F-205ENST00000426511 DHX29Q7Z478 1369 aaKnown RBP34.47■■■■□ 3.11
SEMA3F-205ENST00000426511 UHRF1BP1Q6BDS2 1440 aa34.47■■■■□ 3.11
SEMA3F-205ENST00000426511 CLTCQ00610 1675 aaKnown RBP34.46■■■■□ 3.11
SEMA3F-205ENST00000426511 MROH2AA6NES4 1674 aa34.42■■■■□ 3.1
SEMA3F-205ENST00000426511 ZMYM3Q14202 1370 aa34.42■■■■□ 3.1
SEMA3F-205ENST00000426511 KIF3BO15066 747 aa34.42■■■■□ 3.1
SEMA3F-205ENST00000426511 SETD1BQ9UPS6 1966 aaKnown RBP34.38■■■■□ 3.09
SEMA3F-205ENST00000426511 PTPN23Q9H3S7 1636 aa34.35■■■■□ 3.09
SEMA3F-205ENST00000426511 MAST1Q9Y2H9 1570 aa34.33■■■■□ 3.09
SEMA3F-205ENST00000426511 PPP6R1Q9UPN7 881 aa34.32■■■■□ 3.08
SEMA3F-205ENST00000426511 NPATQ14207 1427 aa34.3■■■■□ 3.08
SEMA3F-205ENST00000426511 FGD6Q6ZV73 1430 aa34.3■■■■□ 3.08
SEMA3F-205ENST00000426511 ILDR1Q86SU0 546 aaPredicted RBP34.3■■■■□ 3.08
SEMA3F-205ENST00000426511 WASHC2CQ9Y4E1 1318 aa34.25■■■■□ 3.07
SEMA3F-205ENST00000426511 PTPRKQ15262 1439 aa34.24■■■■□ 3.07
SEMA3F-205ENST00000426511 ABCC5O15440 1437 aa34.23■■■■□ 3.07
SEMA3F-205ENST00000426511 KDM5DQ9BY66 1539 aa34.23■■■■□ 3.07
SEMA3F-205ENST00000426511 CROCC2H7BZ55 1655 aa34.22■■■■□ 3.07
SEMA3F-205ENST00000426511 TCOF1Q13428 1488 aaKnown RBP34.2■■■■□ 3.07
SEMA3F-205ENST00000426511 DAPK1P53355 1430 aa34.2■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms