RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 PROM2Q8N271 834 aa9.32□□□□□ -0.92
HERPUD2-204ENST00000426180 DISP1Q96F81 1524 aa9.31□□□□□ -0.92
HERPUD2-204ENST00000426180 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
HERPUD2-204ENST00000426180 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
HERPUD2-204ENST00000426180 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
HERPUD2-204ENST00000426180 TNIKQ9UKE5 1360 aa9.29□□□□□ -0.92
HERPUD2-204ENST00000426180 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
HERPUD2-204ENST00000426180 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
HERPUD2-204ENST00000426180 KIAA0556O60303 1618 aa9.27□□□□□ -0.93
HERPUD2-204ENST00000426180 CARMIL2Q6F5E8 1435 aa9.26□□□□□ -0.93
HERPUD2-204ENST00000426180 SAMD9Q5K651 1589 aa9.25□□□□□ -0.93
HERPUD2-204ENST00000426180 FHOD3Q2V2M9 1422 aa9.25□□□□□ -0.93
HERPUD2-204ENST00000426180 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
HERPUD2-204ENST00000426180 PTPRGP23470 1445 aa9.24□□□□□ -0.93
HERPUD2-204ENST00000426180 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
HERPUD2-204ENST00000426180 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
HERPUD2-204ENST00000426180 CLIP1P30622 1438 aa9.22□□□□□ -0.93
HERPUD2-204ENST00000426180 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
HERPUD2-204ENST00000426180 PELP1Q8IZL8 1130 aaKnown RBP9.22□□□□□ -0.93
HERPUD2-204ENST00000426180 MIER1Q8N108 512 aa9.22□□□□□ -0.93
HERPUD2-204ENST00000426180 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
HERPUD2-204ENST00000426180 EFCAB5A4FU69 1503 aa9.21□□□□□ -0.93
HERPUD2-204ENST00000426180 POTEB2H3BUK9 544 aa9.2□□□□□ -0.94
HERPUD2-204ENST00000426180 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
HERPUD2-204ENST00000426180 PLB1Q6P1J6 1458 aa9.2□□□□□ -0.94
HERPUD2-204ENST00000426180 ASTLQ6HA08 431 aaPredicted RBP9.18□□□□□ -0.94
HERPUD2-204ENST00000426180 UACAQ9BZF9 1416 aa9.18□□□□□ -0.94
HERPUD2-204ENST00000426180 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
HERPUD2-204ENST00000426180 ADCY10Q96PN6 1610 aa9.17□□□□□ -0.94
HERPUD2-204ENST00000426180 ABCA8O94911 1581 aa9.17□□□□□ -0.94
HERPUD2-204ENST00000426180 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
HERPUD2-204ENST00000426180 ATMINO43313 823 aaPredicted RBP9.17□□□□□ -0.94
HERPUD2-204ENST00000426180 C7P10643 843 aa9.16□□□□□ -0.94
HERPUD2-204ENST00000426180 ABCC2Q92887 1545 aa9.15□□□□□ -0.94
HERPUD2-204ENST00000426180 UHRF1BP1LA0JNW5 1464 aa9.15□□□□□ -0.94
HERPUD2-204ENST00000426180 SLC39A7Q92504 469 aa9.15□□□□□ -0.94
HERPUD2-204ENST00000426180 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
HERPUD2-204ENST00000426180 METRNQ9UJH8 293 aa9.14□□□□□ -0.95
HERPUD2-204ENST00000426180 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
HERPUD2-204ENST00000426180 NUP153P49790 1475 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-204ENST00000426180 RAPGEF6Q8TEU7 1601 aa9.13□□□□□ -0.95
HERPUD2-204ENST00000426180 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
HERPUD2-204ENST00000426180 ATP1B4Q9UN42 357 aaPredicted RBP9.12□□□□□ -0.95
HERPUD2-204ENST00000426180 KDM5BQ9UGL1 1544 aa9.11□□□□□ -0.95
HERPUD2-204ENST00000426180 ATP10BO94823 1461 aa9.11□□□□□ -0.95
HERPUD2-204ENST00000426180 CASKIN1Q8WXD9 1431 aa9.11□□□□□ -0.95
HERPUD2-204ENST00000426180 PCF11O94913 1555 aaKnown RBP9.11□□□□□ -0.95
HERPUD2-204ENST00000426180 RASEFQ8IZ41 740 aa9.1□□□□□ -0.95
HERPUD2-204ENST00000426180 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
HERPUD2-204ENST00000426180 ZCCHC11Q5TAX3 1644 aaKnown RBP9.09□□□□□ -0.95
HERPUD2-204ENST00000426180 VPS8Q8N3P4 1428 aa9.09□□□□□ -0.95
HERPUD2-204ENST00000426180 ATN1P54259 1190 aaPredicted RBP9.09□□□□□ -0.95
HERPUD2-204ENST00000426180 MAP3K13O43283 966 aa9.08□□□□□ -0.96
HERPUD2-204ENST00000426180 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
HERPUD2-204ENST00000426180 ASXL2Q76L83 1435 aa9.07□□□□□ -0.96
HERPUD2-204ENST00000426180 EPRSP07814 1512 aaKnown RBP9.07□□□□□ -0.96
HERPUD2-204ENST00000426180 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
HERPUD2-204ENST00000426180 ZBTB47Q9UFB7 747 aaPredicted RBP9.07□□□□□ -0.96
HERPUD2-204ENST00000426180 LRRIQ1Q96JM4 1722 aa9.06□□□□□ -0.96
HERPUD2-204ENST00000426180 MAMSTRQ6ZN01 415 aa9.06□□□□□ -0.96
HERPUD2-204ENST00000426180 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
HERPUD2-204ENST00000426180 POTEJP0CG39 1038 aa9.05□□□□□ -0.96
HERPUD2-204ENST00000426180 BMP2KQ9NSY1 1161 aaPredicted RBP9.05□□□□□ -0.96
HERPUD2-204ENST00000426180 TIE1P35590 1138 aa9.04□□□□□ -0.96
HERPUD2-204ENST00000426180 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
HERPUD2-204ENST00000426180 TRPC6Q9Y210 931 aa9.04□□□□□ -0.96
HERPUD2-204ENST00000426180 WDR7Q9Y4E6 1490 aa9.03□□□□□ -0.96
HERPUD2-204ENST00000426180 PLSCR2Q9NRY7 297 aa9.03□□□□□ -0.96
HERPUD2-204ENST00000426180 MAGI3Q5TCQ9 1506 aa9.03□□□□□ -0.96
HERPUD2-204ENST00000426180 PLEKHD1A6NEE1 506 aa9.02□□□□□ -0.97
HERPUD2-204ENST00000426180 FKBP8Q14318 412 aa9.02□□□□□ -0.97
HERPUD2-204ENST00000426180 ABCC10Q5T3U5 1492 aa9.02□□□□□ -0.97
HERPUD2-204ENST00000426180 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.97
HERPUD2-204ENST00000426180 FAM69CQ0P6D2 419 aa9.01□□□□□ -0.97
HERPUD2-204ENST00000426180 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
HERPUD2-204ENST00000426180 DIP2BQ9P265 1576 aa9□□□□□ -0.97
HERPUD2-204ENST00000426180 POTEMA6NI47 508 aa9□□□□□ -0.97
HERPUD2-204ENST00000426180 NUBP1P53384 320 aa9□□□□□ -0.97
HERPUD2-204ENST00000426180 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
HERPUD2-204ENST00000426180 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
HERPUD2-204ENST00000426180 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
HERPUD2-204ENST00000426180 TROQ12816 1431 aaPredicted RBP8.99□□□□□ -0.97
HERPUD2-204ENST00000426180 PCDHB13Q9Y5F0 798 aa8.99□□□□□ -0.97
HERPUD2-204ENST00000426180 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
HERPUD2-204ENST00000426180 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
HERPUD2-204ENST00000426180 KIF14Q15058 1648 aa8.98□□□□□ -0.97
HERPUD2-204ENST00000426180 CFAP43Q8NDM7 1665 aa8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 POTEFA5A3E0 1075 aa8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 SEC24BO95487 1268 aa8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 POTEGQ6S5H5 508 aa8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 PPARGC1BQ86YN6 1023 aaKnown RBP8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 GLI2P10070 1586 aa8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 MTUS2Q5JR59 1369 aa8.97□□□□□ -0.97
HERPUD2-204ENST00000426180 LRRC9Q6ZRR7 1453 aa8.96□□□□□ -0.97
HERPUD2-204ENST00000426180 KIF13AQ9H1H9 1805 aa8.96□□□□□ -0.97
HERPUD2-204ENST00000426180 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
HERPUD2-204ENST00000426180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.96□□□□□ -0.97
HERPUD2-204ENST00000426180 FAM212AQ96EL1 285 aa8.96□□□□□ -0.98
HERPUD2-204ENST00000426180 TTC37Q6PGP7 1564 aa8.95□□□□□ -0.98
HERPUD2-204ENST00000426180 CD109Q6YHK3 1445 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms