RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 PREX2Q70Z35 1606 aa38.16■■■■□ 3.7
VDAC1-204ENST00000425992 ZMYM4Q5VZL5 1548 aa38.15■■■■□ 3.7
VDAC1-204ENST00000425992 SCAPERQ9BY12 1400 aa38.14■■■■□ 3.7
VDAC1-204ENST00000425992 ARHGEF40Q8TER5 1519 aa38.14■■■■□ 3.7
VDAC1-204ENST00000425992 CDC42BPAQ5VT25 1732 aa38.12■■■■□ 3.69
VDAC1-204ENST00000425992 POGZQ7Z3K3 1410 aa38.1■■■■□ 3.69
VDAC1-204ENST00000425992 ZFYVE16Q7Z3T8 1539 aa38.03■■■■□ 3.68
VDAC1-204ENST00000425992 YEATS2Q9ULM3 1422 aa38.01■■■■□ 3.68
VDAC1-204ENST00000425992 MAGI2Q86UL8 1455 aa38■■■■□ 3.67
VDAC1-204ENST00000425992 BCORL1Q5H9F3 1711 aa37.98■■■■□ 3.67
VDAC1-204ENST00000425992 MTUS2Q5JR59 1369 aa37.97■■■■□ 3.67
VDAC1-204ENST00000425992 ADAMTSL3P82987 1691 aa37.97■■■■□ 3.67
VDAC1-204ENST00000425992 SIGLEC1Q9BZZ2 1709 aa37.95■■■■□ 3.67
VDAC1-204ENST00000425992 ABCC1P33527 1531 aa37.95■■■■□ 3.67
VDAC1-204ENST00000425992 ZNF518AQ6AHZ1 1483 aa37.95■■■■□ 3.67
VDAC1-204ENST00000425992 ITSN2Q9NZM3 1697 aa37.95■■■■□ 3.66
VDAC1-204ENST00000425992 KDM5CP41229 1560 aa37.93■■■■□ 3.66
VDAC1-204ENST00000425992 EHBP1L1Q8N3D4 1523 aa37.92■■■■□ 3.66
VDAC1-204ENST00000425992 GPATCH8Q9UKJ3 1502 aaKnown RBP37.92■■■■□ 3.66
VDAC1-204ENST00000425992 ARID4BQ4LE39 1312 aaPredicted RBP37.9■■■■□ 3.66
VDAC1-204ENST00000425992 ARHGEF12Q9NZN5 1544 aa37.9■■■■□ 3.66
VDAC1-204ENST00000425992 VPS8Q8N3P4 1428 aa37.89■■■■□ 3.66
VDAC1-204ENST00000425992 AFAP1Q8N556 730 aa37.88■■■■□ 3.65
VDAC1-204ENST00000425992 SAMD9LQ8IVG5 1584 aa37.88■■■■□ 3.65
VDAC1-204ENST00000425992 HECW2Q9P2P5 1572 aa37.85■■■■□ 3.65
VDAC1-204ENST00000425992 MADDQ8WXG6 1647 aa37.84■■■■□ 3.65
VDAC1-204ENST00000425992 TRAPPC8Q9Y2L5 1435 aa37.84■■■■□ 3.65
VDAC1-204ENST00000425992 TIAM1Q13009 1591 aa37.84■■■■□ 3.65
VDAC1-204ENST00000425992 CCNB3Q8WWL7 1395 aa37.83■■■■□ 3.65
VDAC1-204ENST00000425992 ATP10AO60312 1499 aa37.8■■■■□ 3.64
VDAC1-204ENST00000425992 ZNF777Q9ULD5 760 aaPredicted RBP37.8■■■■□ 3.64
VDAC1-204ENST00000425992 SYCP2Q9BX26 1530 aa37.77■■■■□ 3.64
VDAC1-204ENST00000425992 C9orf84Q5VXU9 1444 aa37.77■■■■□ 3.64
VDAC1-204ENST00000425992 DIP2CQ9Y2E4 1556 aa37.76■■■■□ 3.63
VDAC1-204ENST00000425992 SUPT6HQ7KZ85 1726 aaKnown RBP37.75■■■■□ 3.63
VDAC1-204ENST00000425992 PTPRMP28827 1452 aa37.75■■■■□ 3.63
VDAC1-204ENST00000425992 MLH3Q9UHC1 1453 aa37.75■■■■□ 3.63
VDAC1-204ENST00000425992 ABCA6Q8N139 1617 aa37.75■■■■□ 3.63
VDAC1-204ENST00000425992 RIMS1Q86UR5 1692 aaKnown RBP37.74■■■■□ 3.63
VDAC1-204ENST00000425992 CFDP1Q9UEE9 299 aaPredicted RBP37.74■■■■□ 3.63
VDAC1-204ENST00000425992 MYT1LQ9UL68 1186 aa37.72■■■■□ 3.63
VDAC1-204ENST00000425992 KIDINS220Q9ULH0 1771 aa37.72■■■■□ 3.63
VDAC1-204ENST00000425992 NCOA2Q15596 1464 aa37.68■■■■□ 3.62
VDAC1-204ENST00000425992 PLEKHH2Q8IVE3 1493 aa37.67■■■■□ 3.62
VDAC1-204ENST00000425992 HNRNPMP52272 730 aaKnown RBP eCLIP37.66■■■■□ 3.624e-6■■■□□ 15.5
VDAC1-204ENST00000425992 KIAA1107Q9UPP5 1409 aa37.66■■■■□ 3.62
VDAC1-204ENST00000425992 FER1L4A9Z1Z3 1794 aa37.65■■■■□ 3.62
VDAC1-204ENST00000425992 REREQ9P2R6 1566 aa37.65■■■■□ 3.62
VDAC1-204ENST00000425992 LRRC9Q6ZRR7 1453 aa37.64■■■■□ 3.62
VDAC1-204ENST00000425992 MLECQ14165 292 aa37.64■■■■□ 3.62
VDAC1-204ENST00000425992 MAP3K1Q13233 1512 aa37.62■■■■□ 3.61
VDAC1-204ENST00000425992 ZNF644Q9H582 1327 aaPredicted RBP37.6■■■■□ 3.61
VDAC1-204ENST00000425992 INO80Q9ULG1 1556 aaPredicted RBP37.55■■■■□ 3.6
VDAC1-204ENST00000425992 SPAG9O60271 1321 aaKnown RBP37.55■■■■□ 3.6
VDAC1-204ENST00000425992 ATP7AQ04656 1500 aa37.54■■■■□ 3.6
VDAC1-204ENST00000425992 KANK4Q5T7N3 995 aaPredicted RBP37.53■■■■□ 3.6
VDAC1-204ENST00000425992 MBD5Q9P267 1494 aa37.51■■■■□ 3.59
VDAC1-204ENST00000425992 AGLP35573 1532 aa37.51■■■■□ 3.59
VDAC1-204ENST00000425992 CAMSAP2Q08AD1 1489 aa37.48■■■■□ 3.59
VDAC1-204ENST00000425992 PLPPR3Q6T4P5 718 aa37.42■■■■□ 3.58
VDAC1-204ENST00000425992 ADGBQ8N7X0 1667 aa37.38■■■■□ 3.57
VDAC1-204ENST00000425992 PLXNC1O60486 1568 aa37.38■■■■□ 3.57
VDAC1-204ENST00000425992 APLP2Q06481 763 aa37.36■■■■□ 3.57
VDAC1-204ENST00000425992 CCDC141Q6ZP82 1450 aa37.36■■■■□ 3.57
VDAC1-204ENST00000425992 A2MP01023 1474 aa37.34■■■■□ 3.57
VDAC1-204ENST00000425992 ARHGEF5Q12774 1597 aa37.34■■■■□ 3.57
VDAC1-204ENST00000425992 LMTK3Q96Q04 1460 aa37.33■■■■□ 3.57
VDAC1-204ENST00000425992 RTEL1-TNFRSF6BF6WH68 1400 aa37.32■■■■□ 3.56
VDAC1-204ENST00000425992 MYOM3Q5VTT5 1437 aa37.32■■■■□ 3.56
VDAC1-204ENST00000425992 C3P01024 1663 aa37.28■■■■□ 3.56
VDAC1-204ENST00000425992 CEBPAP49715 358 aaPredicted RBP37.27■■■■□ 3.56
VDAC1-204ENST00000425992 MIA2Q96PC5 1412 aa37.26■■■■□ 3.55
VDAC1-204ENST00000425992 RSPH4AQ5TD94 716 aa37.25■■■■□ 3.55
VDAC1-204ENST00000425992 PREX1Q8TCU6 1659 aa37.21■■■■□ 3.55
VDAC1-204ENST00000425992 ESF1Q9H501 851 aaKnown RBP37.2■■■■□ 3.55
VDAC1-204ENST00000425992 MROH2AA6NES4 1674 aa37.18■■■■□ 3.54
VDAC1-204ENST00000425992 CNTLNQ9NXG0 1405 aa37.18■■■■□ 3.54
VDAC1-204ENST00000425992 CLTCQ00610 1675 aaKnown RBP37.16■■■■□ 3.54
VDAC1-204ENST00000425992 DHX29Q7Z478 1369 aaKnown RBP37.16■■■■□ 3.54
VDAC1-204ENST00000425992 PTPN23Q9H3S7 1636 aa37.15■■■■□ 3.54
VDAC1-204ENST00000425992 MAST1Q9Y2H9 1570 aa37.15■■■■□ 3.54
VDAC1-204ENST00000425992 SETD1BQ9UPS6 1966 aaKnown RBP37.13■■■■□ 3.53
VDAC1-204ENST00000425992 TSPY4P0CV99 314 aa37.13■■■■□ 3.53
VDAC1-204ENST00000425992 TSPY10P0CW01 314 aa37.13■■■■□ 3.53
VDAC1-204ENST00000425992 HSPA2P54652 639 aa37.1■■■■□ 3.53
VDAC1-204ENST00000425992 GGT6Q6P531 493 aa37.1■■■■□ 3.53
VDAC1-204ENST00000425992 CROCC2H7BZ55 1655 aa37.07■■■■□ 3.52
VDAC1-204ENST00000425992 FGD6Q6ZV73 1430 aa37.06■■■■□ 3.52
VDAC1-204ENST00000425992 ZMYM3Q14202 1370 aa37.03■■■■□ 3.52
VDAC1-204ENST00000425992 UHRF1BP1Q6BDS2 1440 aa37.02■■■■□ 3.52
VDAC1-204ENST00000425992 TCOF1Q13428 1488 aaKnown RBP37.01■■■■□ 3.52
VDAC1-204ENST00000425992 KIF3BO15066 747 aa37■■■■□ 3.51
VDAC1-204ENST00000425992 PPP6R1Q9UPN7 881 aa36.98■■■■□ 3.51
VDAC1-204ENST00000425992 DNMT1P26358 1616 aaKnown RBP36.98■■■■□ 3.51
VDAC1-204ENST00000425992 ABCC5O15440 1437 aa36.97■■■■□ 3.51
VDAC1-204ENST00000425992 SHANK2Q9UPX8 1470 aa36.94■■■■□ 3.5
VDAC1-204ENST00000425992 NPATQ14207 1427 aa36.93■■■■□ 3.5
VDAC1-204ENST00000425992 DAPK1P53355 1430 aa36.93■■■■□ 3.5
VDAC1-204ENST00000425992 EIF2AK4Q9P2K8 1649 aaKnown RBP36.92■■■■□ 3.5
VDAC1-204ENST00000425992 RNF17Q9BXT8 1623 aaKnown RBP36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms