RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 CCDC18Q5T9S5 1454 aa14.46□□□□□ -0.09
TPM3P4-201ENST00000425942 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
TPM3P4-201ENST00000425942 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
TPM3P4-201ENST00000425942 ABCC10Q5T3U5 1492 aa14.45□□□□□ -0.1
TPM3P4-201ENST00000425942 WDR7Q9Y4E6 1490 aa14.45□□□□□ -0.1
TPM3P4-201ENST00000425942 ASXL2Q76L83 1435 aa14.43□□□□□ -0.1
TPM3P4-201ENST00000425942 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
TPM3P4-201ENST00000425942 MAP3K4Q9Y6R4 1608 aa14.43□□□□□ -0.1
TPM3P4-201ENST00000425942 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
TPM3P4-201ENST00000425942 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
TPM3P4-201ENST00000425942 ATP10BO94823 1461 aa14.4□□□□□ -0.1
TPM3P4-201ENST00000425942 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
TPM3P4-201ENST00000425942 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
TPM3P4-201ENST00000425942 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
TPM3P4-201ENST00000425942 ABCA9Q8IUA7 1624 aa14.39□□□□□ -0.11
TPM3P4-201ENST00000425942 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
TPM3P4-201ENST00000425942 CDK13Q14004 1512 aaKnown RBP14.37□□□□□ -0.11
TPM3P4-201ENST00000425942 KIF14Q15058 1648 aa14.37□□□□□ -0.11
TPM3P4-201ENST00000425942 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
TPM3P4-201ENST00000425942 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
TPM3P4-201ENST00000425942 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
TPM3P4-201ENST00000425942 CFAP74Q9C0B2 1584 aa14.34□□□□□ -0.11
TPM3P4-201ENST00000425942 TSPOAP1O95153 1857 aa14.33□□□□□ -0.11
TPM3P4-201ENST00000425942 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
TPM3P4-201ENST00000425942 TEX14Q8IWB6 1497 aa14.31□□□□□ -0.12
TPM3P4-201ENST00000425942 EHBP1L1Q8N3D4 1523 aa14.31□□□□□ -0.12
TPM3P4-201ENST00000425942 MAP3K1Q13233 1512 aa14.31□□□□□ -0.12
TPM3P4-201ENST00000425942 TIAM1Q13009 1591 aa14.3□□□□□ -0.12
TPM3P4-201ENST00000425942 ARAP3Q8WWN8 1544 aa14.3□□□□□ -0.12
TPM3P4-201ENST00000425942 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
TPM3P4-201ENST00000425942 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
TPM3P4-201ENST00000425942 TTC37Q6PGP7 1564 aa14.29□□□□□ -0.12
TPM3P4-201ENST00000425942 LOC105371045A0A1W2PR82 267 aa14.28□□□□□ -0.12
TPM3P4-201ENST00000425942 ITSN2Q9NZM3 1697 aa14.27□□□□□ -0.12
TPM3P4-201ENST00000425942 PREX2Q70Z35 1606 aa14.27□□□□□ -0.12
TPM3P4-201ENST00000425942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.27□□□□□ -0.12
TPM3P4-201ENST00000425942 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.13
TPM3P4-201ENST00000425942 SUPT6HQ7KZ85 1726 aaKnown RBP14.26□□□□□ -0.13
TPM3P4-201ENST00000425942 KDM6BO15054 1643 aa14.24□□□□□ -0.13
TPM3P4-201ENST00000425942 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
TPM3P4-201ENST00000425942 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
TPM3P4-201ENST00000425942 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
TPM3P4-201ENST00000425942 CD109Q6YHK3 1445 aa14.22□□□□□ -0.13
TPM3P4-201ENST00000425942 NEO1Q92859 1461 aa14.21□□□□□ -0.13
TPM3P4-201ENST00000425942 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
TPM3P4-201ENST00000425942 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.14
TPM3P4-201ENST00000425942 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
TPM3P4-201ENST00000425942 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
TPM3P4-201ENST00000425942 PHLDB1Q86UU1 1377 aa14.19□□□□□ -0.14
TPM3P4-201ENST00000425942 ATP1B4Q9UN42 357 aaPredicted RBP14.18□□□□□ -0.14
TPM3P4-201ENST00000425942 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
TPM3P4-201ENST00000425942 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
TPM3P4-201ENST00000425942 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
TPM3P4-201ENST00000425942 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
TPM3P4-201ENST00000425942 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.14
TPM3P4-201ENST00000425942 FANCAO15360 1455 aa14.14□□□□□ -0.15
TPM3P4-201ENST00000425942 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
TPM3P4-201ENST00000425942 PLCH2O75038 1416 aa14.14□□□□□ -0.15
TPM3P4-201ENST00000425942 ABCC1P33527 1531 aa14.12□□□□□ -0.15
TPM3P4-201ENST00000425942 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
TPM3P4-201ENST00000425942 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
TPM3P4-201ENST00000425942 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
TPM3P4-201ENST00000425942 FRMPD1Q5SYB0 1578 aa14.11□□□□□ -0.15
TPM3P4-201ENST00000425942 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
TPM3P4-201ENST00000425942 PLEKHH2Q8IVE3 1493 aa14.09□□□□□ -0.15
TPM3P4-201ENST00000425942 ADGRL1O94910 1474 aa14.08□□□□□ -0.16
TPM3P4-201ENST00000425942 GPATCH8Q9UKJ3 1502 aaKnown RBP14.08□□□□□ -0.16
TPM3P4-201ENST00000425942 KDM5CP41229 1560 aa14.08□□□□□ -0.16
TPM3P4-201ENST00000425942 SAMD9LQ8IVG5 1584 aa14.08□□□□□ -0.16
TPM3P4-201ENST00000425942 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
TPM3P4-201ENST00000425942 ARHGEF40Q8TER5 1519 aa14.06□□□□□ -0.16
TPM3P4-201ENST00000425942 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
TPM3P4-201ENST00000425942 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
TPM3P4-201ENST00000425942 POGZQ7Z3K3 1410 aa14.05□□□□□ -0.16
TPM3P4-201ENST00000425942 DENND4BO75064 1496 aaPredicted RBP14.05□□□□□ -0.16
TPM3P4-201ENST00000425942 ZNF518AQ6AHZ1 1483 aa14.05□□□□□ -0.16
TPM3P4-201ENST00000425942 ARHGEF5Q12774 1597 aa14.02□□□□□ -0.16
TPM3P4-201ENST00000425942 SYCP2Q9BX26 1530 aa14.02□□□□□ -0.16
TPM3P4-201ENST00000425942 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
TPM3P4-201ENST00000425942 MYOM3Q5VTT5 1437 aa14.02□□□□□ -0.16
TPM3P4-201ENST00000425942 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
TPM3P4-201ENST00000425942 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
TPM3P4-201ENST00000425942 COL17A1Q9UMD9 1497 aaPredicted RBP14.01□□□□□ -0.17
TPM3P4-201ENST00000425942 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
TPM3P4-201ENST00000425942 EFCAB2Q5VUJ9 269 aa14.01□□□□□ -0.17
TPM3P4-201ENST00000425942 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
TPM3P4-201ENST00000425942 CAMSAP2Q08AD1 1489 aa13.99□□□□□ -0.17
TPM3P4-201ENST00000425942 PTPN23Q9H3S7 1636 aa13.99□□□□□ -0.17
TPM3P4-201ENST00000425942 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
TPM3P4-201ENST00000425942 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
TPM3P4-201ENST00000425942 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
TPM3P4-201ENST00000425942 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
TPM3P4-201ENST00000425942 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
TPM3P4-201ENST00000425942 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
TPM3P4-201ENST00000425942 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.18
TPM3P4-201ENST00000425942 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.18
TPM3P4-201ENST00000425942 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
TPM3P4-201ENST00000425942 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
TPM3P4-201ENST00000425942 MLH3Q9UHC1 1453 aa13.95□□□□□ -0.18
TPM3P4-201ENST00000425942 DNMT1P26358 1616 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms