RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 ABCA9Q8IUA7 1624 aa23.92■■□□□ 1.42
SCRN1-205ENST00000425819 MYO5CQ9NQX4 1742 aa23.9■■□□□ 1.42
SCRN1-205ENST00000425819 PLCH2O75038 1416 aa23.9■■□□□ 1.42
SCRN1-205ENST00000425819 ARHGAP5Q13017 1502 aa23.9■■□□□ 1.42
SCRN1-205ENST00000425819 CDC42BPBQ9Y5S2 1711 aa23.89■■□□□ 1.41
SCRN1-205ENST00000425819 CAMSAP2Q08AD1 1489 aa23.88■■□□□ 1.41
SCRN1-205ENST00000425819 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
SCRN1-205ENST00000425819 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
SCRN1-205ENST00000425819 EFCAB2Q5VUJ9 269 aa23.83■■□□□ 1.41
SCRN1-205ENST00000425819 DIP2BQ9P265 1576 aa23.82■■□□□ 1.4
SCRN1-205ENST00000425819 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
SCRN1-205ENST00000425819 ARAP3Q8WWN8 1544 aa23.81■■□□□ 1.4
SCRN1-205ENST00000425819 GLI2P10070 1586 aa23.81■■□□□ 1.4
SCRN1-205ENST00000425819 PTPRKQ15262 1439 aa23.78■■□□□ 1.4
SCRN1-205ENST00000425819 FANCAO15360 1455 aa23.78■■□□□ 1.4
SCRN1-205ENST00000425819 HNRNPMP52272 730 aaKnown RBP eCLIP23.78■■□□□ 1.4
SCRN1-205ENST00000425819 DAPK1P53355 1430 aa23.76■■□□□ 1.39
SCRN1-205ENST00000425819 ABCC5O15440 1437 aa23.76■■□□□ 1.39
SCRN1-205ENST00000425819 MAP3K4Q9Y6R4 1608 aa23.76■■□□□ 1.39
SCRN1-205ENST00000425819 DNMT1P26358 1616 aaKnown RBP23.75■■□□□ 1.39
SCRN1-205ENST00000425819 SYCP2Q9BX26 1530 aa23.74■■□□□ 1.39
SCRN1-205ENST00000425819 PLEKHH2Q8IVE3 1493 aa23.74■■□□□ 1.39
SCRN1-205ENST00000425819 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
SCRN1-205ENST00000425819 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
SCRN1-205ENST00000425819 KIAA1107Q9UPP5 1409 aa23.72■■□□□ 1.39
SCRN1-205ENST00000425819 ABCC1P33527 1531 aa23.71■■□□□ 1.39
SCRN1-205ENST00000425819 ARHGEF12Q9NZN5 1544 aa23.71■■□□□ 1.39
SCRN1-205ENST00000425819 AKNAQ7Z591 1439 aa23.69■■□□□ 1.38
SCRN1-205ENST00000425819 ARHGEF5Q12774 1597 aa23.68■■□□□ 1.38
SCRN1-205ENST00000425819 ADGRL1O94910 1474 aa23.67■■□□□ 1.38
SCRN1-205ENST00000425819 CCDC141Q6ZP82 1450 aa23.67■■□□□ 1.38
SCRN1-205ENST00000425819 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
SCRN1-205ENST00000425819 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
SCRN1-205ENST00000425819 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
SCRN1-205ENST00000425819 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
SCRN1-205ENST00000425819 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
SCRN1-205ENST00000425819 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
SCRN1-205ENST00000425819 TRAPPC8Q9Y2L5 1435 aa23.64■■□□□ 1.38
SCRN1-205ENST00000425819 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
SCRN1-205ENST00000425819 NEO1Q92859 1461 aa23.64■■□□□ 1.37
SCRN1-205ENST00000425819 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.37
SCRN1-205ENST00000425819 C9orf84Q5VXU9 1444 aa23.63■■□□□ 1.37
SCRN1-205ENST00000425819 SHANK2Q9UPX8 1470 aa23.62■■□□□ 1.37
SCRN1-205ENST00000425819 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
SCRN1-205ENST00000425819 TRHP20396 242 aaPredicted RBP23.61■■□□□ 1.37
SCRN1-205ENST00000425819 SETD5Q9C0A6 1442 aa23.61■■□□□ 1.37
SCRN1-205ENST00000425819 ROCK1Q13464 1354 aa23.6■■□□□ 1.37
SCRN1-205ENST00000425819 AFAP1Q8N556 730 aa23.6■■□□□ 1.37
SCRN1-205ENST00000425819 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
SCRN1-205ENST00000425819 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
SCRN1-205ENST00000425819 TEX14Q8IWB6 1497 aa23.59■■□□□ 1.37
SCRN1-205ENST00000425819 NAIPQ13075 1403 aa23.58■■□□□ 1.36
SCRN1-205ENST00000425819 ADGRL2O95490 1459 aa23.57■■□□□ 1.36
SCRN1-205ENST00000425819 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
SCRN1-205ENST00000425819 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
SCRN1-205ENST00000425819 NCOA1Q15788 1441 aa23.56■■□□□ 1.36
SCRN1-205ENST00000425819 ADGBQ8N7X0 1667 aa23.55■■□□□ 1.36
SCRN1-205ENST00000425819 SPAG9O60271 1321 aaKnown RBP23.54■■□□□ 1.36
SCRN1-205ENST00000425819 POGZQ7Z3K3 1410 aa23.53■■□□□ 1.36
SCRN1-205ENST00000425819 MAST1Q9Y2H9 1570 aa23.53■■□□□ 1.36
SCRN1-205ENST00000425819 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
SCRN1-205ENST00000425819 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
SCRN1-205ENST00000425819 RAPGEF3O95398 923 aa23.51■■□□□ 1.35
SCRN1-205ENST00000425819 GCC2Q8IWJ2 1684 aa23.5■■□□□ 1.35
SCRN1-205ENST00000425819 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
SCRN1-205ENST00000425819 KIF15Q9NS87 1388 aa23.49■■□□□ 1.35
SCRN1-205ENST00000425819 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
SCRN1-205ENST00000425819 ZFYVE16Q7Z3T8 1539 aa23.47■■□□□ 1.35
SCRN1-205ENST00000425819 ATP7AQ04656 1500 aa23.45■■□□□ 1.34
SCRN1-205ENST00000425819 KDM6BO15054 1643 aa23.45■■□□□ 1.34
SCRN1-205ENST00000425819 KDM5CP41229 1560 aa23.45■■□□□ 1.34
SCRN1-205ENST00000425819 HRCP23327 699 aa23.44■■□□□ 1.34
SCRN1-205ENST00000425819 PLXNC1O60486 1568 aa23.44■■□□□ 1.34
SCRN1-205ENST00000425819 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
SCRN1-205ENST00000425819 ANKRD50Q9ULJ7 1429 aa23.42■■□□□ 1.34
SCRN1-205ENST00000425819 RICTORQ6R327 1708 aa23.41■■□□□ 1.34
SCRN1-205ENST00000425819 FRMPD1Q5SYB0 1578 aa23.41■■□□□ 1.34
SCRN1-205ENST00000425819 MLH3Q9UHC1 1453 aa23.4■■□□□ 1.34
SCRN1-205ENST00000425819 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
SCRN1-205ENST00000425819 COL17A1Q9UMD9 1497 aaPredicted RBP23.39■■□□□ 1.34
SCRN1-205ENST00000425819 HECW2Q9P2P5 1572 aa23.39■■□□□ 1.33
SCRN1-205ENST00000425819 KIDINS220Q9ULH0 1771 aa23.38■■□□□ 1.33
SCRN1-205ENST00000425819 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
SCRN1-205ENST00000425819 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
SCRN1-205ENST00000425819 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
SCRN1-205ENST00000425819 ZMYM4Q5VZL5 1548 aa23.33■■□□□ 1.33
SCRN1-205ENST00000425819 ERBINQ96RT1 1412 aa23.32■■□□□ 1.32
SCRN1-205ENST00000425819 YEATS2Q9ULM3 1422 aa23.31■■□□□ 1.32
SCRN1-205ENST00000425819 DHX29Q7Z478 1369 aaKnown RBP23.3■■□□□ 1.32
SCRN1-205ENST00000425819 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
SCRN1-205ENST00000425819 A2MP01023 1474 aa23.28■■□□□ 1.32
SCRN1-205ENST00000425819 DIP2CQ9Y2E4 1556 aa23.28■■□□□ 1.32
SCRN1-205ENST00000425819 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
SCRN1-205ENST00000425819 MAGI2Q86UL8 1455 aa23.27■■□□□ 1.32
SCRN1-205ENST00000425819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.313e-8■□□□□ 8.7
SCRN1-205ENST00000425819 NUP155O75694 1391 aa23.23■■□□□ 1.31
SCRN1-205ENST00000425819 KIF3BO15066 747 aa23.23■■□□□ 1.31
SCRN1-205ENST00000425819 MPHOSPH9Q99550 1183 aa23.22■■□□□ 1.31
SCRN1-205ENST00000425819 ATP10AO60312 1499 aa23.2■■□□□ 1.3
SCRN1-205ENST00000425819 PZPP20742 1482 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms