RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 MSH5O43196 834 aa23.84■■□□□ 1.41
RARA-206ENST00000425707 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
RARA-206ENST00000425707 RRP7BPQ9NSQ0 103 aa23.84■■□□□ 1.41
RARA-206ENST00000425707 DNMT1P26358 1616 aaKnown RBP23.83■■□□□ 1.41
RARA-206ENST00000425707 ANKRD30BQ9BXX2 1392 aa23.83■■□□□ 1.41
RARA-206ENST00000425707 BCL11AQ9H165 835 aa23.83■■□□□ 1.4
RARA-206ENST00000425707 SPATA31E1Q6ZUB1 1445 aa23.83■■□□□ 1.4
RARA-206ENST00000425707 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
RARA-206ENST00000425707 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
RARA-206ENST00000425707 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
RARA-206ENST00000425707 DAPK1P53355 1430 aa23.77■■□□□ 1.4
RARA-206ENST00000425707 MYT1LQ9UL68 1186 aa23.77■■□□□ 1.4
RARA-206ENST00000425707 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
RARA-206ENST00000425707 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
RARA-206ENST00000425707 C11orf95C9JLR9 678 aaPredicted RBP23.71■■□□□ 1.39
RARA-206ENST00000425707 CCDC184Q52MB2 194 aa23.7■■□□□ 1.39
RARA-206ENST00000425707 ABCC5O15440 1437 aa23.7■■□□□ 1.38
RARA-206ENST00000425707 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
RARA-206ENST00000425707 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
RARA-206ENST00000425707 SMG6Q86US8 1419 aaKnown RBP23.68■■□□□ 1.38
RARA-206ENST00000425707 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
RARA-206ENST00000425707 KIF7Q2M1P5 1343 aa23.67■■□□□ 1.38
RARA-206ENST00000425707 ARID4BQ4LE39 1312 aaPredicted RBP23.67■■□□□ 1.38
RARA-206ENST00000425707 ADGBQ8N7X0 1667 aa23.66■■□□□ 1.38
RARA-206ENST00000425707 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
RARA-206ENST00000425707 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
RARA-206ENST00000425707 KIF14Q15058 1648 aa23.62■■□□□ 1.37
RARA-206ENST00000425707 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
RARA-206ENST00000425707 RNF123Q5XPI4 1314 aa23.62■■□□□ 1.37
RARA-206ENST00000425707 ITSN2Q9NZM3 1697 aa23.61■■□□□ 1.37
RARA-206ENST00000425707 FAM9BQ8IZU0 186 aa23.61■■□□□ 1.37
RARA-206ENST00000425707 PZPP20742 1482 aa23.61■■□□□ 1.37
RARA-206ENST00000425707 DHX29Q7Z478 1369 aaKnown RBP23.6■■□□□ 1.37
RARA-206ENST00000425707 RAPGEF6Q8TEU7 1601 aa23.6■■□□□ 1.37
RARA-206ENST00000425707 ADGRL2O95490 1459 aa23.59■■□□□ 1.37
RARA-206ENST00000425707 CROCC2H7BZ55 1655 aa23.58■■□□□ 1.37
RARA-206ENST00000425707 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
RARA-206ENST00000425707 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
RARA-206ENST00000425707 ADCY10Q96PN6 1610 aa23.56■■□□□ 1.36
RARA-206ENST00000425707 KDM5CP41229 1560 aa23.55■■□□□ 1.36
RARA-206ENST00000425707 DISP1Q96F81 1524 aa23.55■■□□□ 1.36
RARA-206ENST00000425707 FOXD1Q16676 465 aa23.55■■□□□ 1.36
RARA-206ENST00000425707 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
RARA-206ENST00000425707 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
RARA-206ENST00000425707 KIAA1107Q9UPP5 1409 aa23.54■■□□□ 1.36
RARA-206ENST00000425707 BCORL1Q5H9F3 1711 aa23.54■■□□□ 1.36
RARA-206ENST00000425707 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
RARA-206ENST00000425707 UHRF1BP1Q6BDS2 1440 aa23.52■■□□□ 1.36
RARA-206ENST00000425707 NUDCQ9Y266 331 aa23.51■■□□□ 1.35
RARA-206ENST00000425707 B4GALNT3Q6L9W6 998 aa23.51■■□□□ 1.35
RARA-206ENST00000425707 CAMSAP2Q08AD1 1489 aa23.5■■□□□ 1.35
RARA-206ENST00000425707 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
RARA-206ENST00000425707 ARHGEF12Q9NZN5 1544 aa23.49■■□□□ 1.35
RARA-206ENST00000425707 KTN1Q86UP2 1357 aaKnown RBP23.48■■□□□ 1.35
RARA-206ENST00000425707 USP47Q96K76 1375 aa23.48■■□□□ 1.35
RARA-206ENST00000425707 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
RARA-206ENST00000425707 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
RARA-206ENST00000425707 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
RARA-206ENST00000425707 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
RARA-206ENST00000425707 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
RARA-206ENST00000425707 SHANK2Q9UPX8 1470 aa23.41■■□□□ 1.34
RARA-206ENST00000425707 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
RARA-206ENST00000425707 E9PCH4 1651 aa23.39■■□□□ 1.34
RARA-206ENST00000425707 LRPPRCP42704 1394 aaKnown RBP23.39■■□□□ 1.34
RARA-206ENST00000425707 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.34
RARA-206ENST00000425707 PNISRQ8TF01 805 aaKnown RBP23.38■■□□□ 1.33
RARA-206ENST00000425707 KIF15Q9NS87 1388 aa23.37■■□□□ 1.33
RARA-206ENST00000425707 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
RARA-206ENST00000425707 BRD4O60885 1362 aaPredicted RBP23.35■■□□□ 1.33
RARA-206ENST00000425707 CFDP1Q9UEE9 299 aaPredicted RBP23.34■■□□□ 1.33
RARA-206ENST00000425707 CCDC136Q96JN2 1154 aa23.33■■□□□ 1.33
RARA-206ENST00000425707 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.33
RARA-206ENST00000425707 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
RARA-206ENST00000425707 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
RARA-206ENST00000425707 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
RARA-206ENST00000425707 CDC42BPAQ5VT25 1732 aa23.3■■□□□ 1.32
RARA-206ENST00000425707 PKD2Q13563 968 aa23.3■■□□□ 1.32
RARA-206ENST00000425707 RALBP1Q15311 655 aa23.3■■□□□ 1.32
RARA-206ENST00000425707 IPO9Q96P70 1041 aaKnown RBP23.28■■□□□ 1.32
RARA-206ENST00000425707 PTPRGP23470 1445 aa23.28■■□□□ 1.32
RARA-206ENST00000425707 ANP32AP39687 249 aaKnown RBP23.28■■□□□ 1.32
RARA-206ENST00000425707 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
RARA-206ENST00000425707 MYBBP1AQ9BQG0 1328 aaKnown RBP23.27■■□□□ 1.32
RARA-206ENST00000425707 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
RARA-206ENST00000425707 INSRP06213 1382 aa23.27■■□□□ 1.32
RARA-206ENST00000425707 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
RARA-206ENST00000425707 DEKP35659 375 aaKnown RBP23.26■■□□□ 1.31
RARA-206ENST00000425707 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
RARA-206ENST00000425707 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
RARA-206ENST00000425707 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
RARA-206ENST00000425707 ABCC10Q5T3U5 1492 aa23.22■■□□□ 1.31
RARA-206ENST00000425707 PDE3BQ13370 1112 aa23.22■■□□□ 1.31
RARA-206ENST00000425707 C9orf84Q5VXU9 1444 aa23.21■■□□□ 1.31
RARA-206ENST00000425707 FBLN2P98095 1184 aa23.21■■□□□ 1.31
RARA-206ENST00000425707 LAMC1P11047 1609 aa23.21■■□□□ 1.31
RARA-206ENST00000425707 CARD11Q9BXL7 1154 aa23.2■■□□□ 1.3
RARA-206ENST00000425707 PLB1Q6P1J6 1458 aa23.2■■□□□ 1.3
RARA-206ENST00000425707 PAK3O75914 559 aaPredicted RBP23.19■■□□□ 1.3
RARA-206ENST00000425707 CARMIL2Q6F5E8 1435 aa23.18■■□□□ 1.3
RARA-206ENST00000425707 NUP155O75694 1391 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms