RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 ADCY10Q96PN6 1610 aa11.33□□□□□ -0.6
CHCHD3P1-201ENST00000425516 ABCC2Q92887 1545 aa11.32□□□□□ -0.6
CHCHD3P1-201ENST00000425516 FMN1Q68DA7 1419 aa11.32□□□□□ -0.6
CHCHD3P1-201ENST00000425516 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
CHCHD3P1-201ENST00000425516 KDM5BQ9UGL1 1544 aa11.29□□□□□ -0.6
CHCHD3P1-201ENST00000425516 RAPGEF6Q8TEU7 1601 aa11.28□□□□□ -0.6
CHCHD3P1-201ENST00000425516 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
CHCHD3P1-201ENST00000425516 ATP10BO94823 1461 aa11.27□□□□□ -0.6
CHCHD3P1-201ENST00000425516 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
CHCHD3P1-201ENST00000425516 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
CHCHD3P1-201ENST00000425516 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHCHD3P1-201ENST00000425516 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
CHCHD3P1-201ENST00000425516 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
CHCHD3P1-201ENST00000425516 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
CHCHD3P1-201ENST00000425516 ZCCHC11Q5TAX3 1644 aaKnown RBP11.23□□□□□ -0.61
CHCHD3P1-201ENST00000425516 MAPKBP1O60336 1514 aa11.22□□□□□ -0.61
CHCHD3P1-201ENST00000425516 EPRSP07814 1512 aaKnown RBP11.22□□□□□ -0.61
CHCHD3P1-201ENST00000425516 HECW1Q76N89 1606 aa11.22□□□□□ -0.61
CHCHD3P1-201ENST00000425516 ARID3CA6NKF2 412 aa11.21□□□□□ -0.61
CHCHD3P1-201ENST00000425516 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
CHCHD3P1-201ENST00000425516 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
CHCHD3P1-201ENST00000425516 ASXL2Q76L83 1435 aa11.2□□□□□ -0.62
CHCHD3P1-201ENST00000425516 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
CHCHD3P1-201ENST00000425516 EVX2Q03828 476 aa11.19□□□□□ -0.62
CHCHD3P1-201ENST00000425516 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
CHCHD3P1-201ENST00000425516 CCDC18Q5T9S5 1454 aa11.17□□□□□ -0.62
CHCHD3P1-201ENST00000425516 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
CHCHD3P1-201ENST00000425516 PLEKHD1A6NEE1 506 aa11.16□□□□□ -0.62
CHCHD3P1-201ENST00000425516 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
CHCHD3P1-201ENST00000425516 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
CHCHD3P1-201ENST00000425516 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
CHCHD3P1-201ENST00000425516 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
CHCHD3P1-201ENST00000425516 CDK11AQ9UQ88 783 aaPredicted RBP11.14□□□□□ -0.63
CHCHD3P1-201ENST00000425516 DIP2BQ9P265 1576 aa11.13□□□□□ -0.63
CHCHD3P1-201ENST00000425516 GLI2P10070 1586 aa11.12□□□□□ -0.63
CHCHD3P1-201ENST00000425516 TROQ12816 1431 aaPredicted RBP11.12□□□□□ -0.63
CHCHD3P1-201ENST00000425516 HAX1O00165 279 aa11.12□□□□□ -0.63
CHCHD3P1-201ENST00000425516 FAM69CQ0P6D2 419 aa11.12□□□□□ -0.63
CHCHD3P1-201ENST00000425516 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
CHCHD3P1-201ENST00000425516 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
CHCHD3P1-201ENST00000425516 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
CHCHD3P1-201ENST00000425516 KIF13AQ9H1H9 1805 aa11.1□□□□□ -0.63
CHCHD3P1-201ENST00000425516 CFAP43Q8NDM7 1665 aa11.09□□□□□ -0.63
CHCHD3P1-201ENST00000425516 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
CHCHD3P1-201ENST00000425516 LRRC9Q6ZRR7 1453 aa11.08□□□□□ -0.64
CHCHD3P1-201ENST00000425516 MTUS2Q5JR59 1369 aa11.08□□□□□ -0.64
CHCHD3P1-201ENST00000425516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHCHD3P1-201ENST00000425516 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
CHCHD3P1-201ENST00000425516 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
CHCHD3P1-201ENST00000425516 KIF14Q15058 1648 aa11.06□□□□□ -0.64
CHCHD3P1-201ENST00000425516 MAP3K4Q9Y6R4 1608 aa11.06□□□□□ -0.64
CHCHD3P1-201ENST00000425516 EHBP1L1Q8N3D4 1523 aa11.05□□□□□ -0.64
CHCHD3P1-201ENST00000425516 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
CHCHD3P1-201ENST00000425516 CD109Q6YHK3 1445 aa11.05□□□□□ -0.64
CHCHD3P1-201ENST00000425516 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
CHCHD3P1-201ENST00000425516 PLCH2O75038 1416 aa11.02□□□□□ -0.64
CHCHD3P1-201ENST00000425516 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.64
CHCHD3P1-201ENST00000425516 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
CHCHD3P1-201ENST00000425516 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
CHCHD3P1-201ENST00000425516 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
CHCHD3P1-201ENST00000425516 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
CHCHD3P1-201ENST00000425516 SUPT6HQ7KZ85 1726 aaKnown RBP10.99□□□□□ -0.65
CHCHD3P1-201ENST00000425516 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
CHCHD3P1-201ENST00000425516 CCNB3Q8WWL7 1395 aa10.98□□□□□ -0.65
CHCHD3P1-201ENST00000425516 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
CHCHD3P1-201ENST00000425516 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 PPARGC1BQ86YN6 1023 aaKnown RBP10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 TEX14Q8IWB6 1497 aa10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 NEO1Q92859 1461 aa10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 CDC42BPAQ5VT25 1732 aa10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 MYO5CQ9NQX4 1742 aa10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 CDC42BPBQ9Y5S2 1711 aa10.97□□□□□ -0.65
CHCHD3P1-201ENST00000425516 PREX2Q70Z35 1606 aa10.96□□□□□ -0.65
CHCHD3P1-201ENST00000425516 FANCAO15360 1455 aa10.96□□□□□ -0.65
CHCHD3P1-201ENST00000425516 COL17A1Q9UMD9 1497 aaPredicted RBP10.96□□□□□ -0.65
CHCHD3P1-201ENST00000425516 AKNAQ7Z591 1439 aa10.95□□□□□ -0.66
CHCHD3P1-201ENST00000425516 CFDP1Q9UEE9 299 aaPredicted RBP10.95□□□□□ -0.66
CHCHD3P1-201ENST00000425516 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
CHCHD3P1-201ENST00000425516 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
CHCHD3P1-201ENST00000425516 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
CHCHD3P1-201ENST00000425516 MIA2Q96PC5 1412 aa10.93□□□□□ -0.66
CHCHD3P1-201ENST00000425516 ZNF644Q9H582 1327 aaPredicted RBP10.93□□□□□ -0.66
CHCHD3P1-201ENST00000425516 MIER1Q8N108 512 aa10.93□□□□□ -0.66
CHCHD3P1-201ENST00000425516 CFAP74Q9C0B2 1584 aa10.92□□□□□ -0.66
CHCHD3P1-201ENST00000425516 ITSN2Q9NZM3 1697 aa10.92□□□□□ -0.66
CHCHD3P1-201ENST00000425516 SAMD9LQ8IVG5 1584 aa10.91□□□□□ -0.66
CHCHD3P1-201ENST00000425516 ARHGEF12Q9NZN5 1544 aa10.91□□□□□ -0.66
CHCHD3P1-201ENST00000425516 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
CHCHD3P1-201ENST00000425516 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
CHCHD3P1-201ENST00000425516 KIAA1107Q9UPP5 1409 aa10.91□□□□□ -0.66
CHCHD3P1-201ENST00000425516 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
CHCHD3P1-201ENST00000425516 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
CHCHD3P1-201ENST00000425516 ZNF777Q9ULD5 760 aaPredicted RBP10.9□□□□□ -0.66
CHCHD3P1-201ENST00000425516 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
CHCHD3P1-201ENST00000425516 RAPGEF3O95398 923 aa10.89□□□□□ -0.67
CHCHD3P1-201ENST00000425516 HNRNPMP52272 730 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHCHD3P1-201ENST00000425516 ABCC1P33527 1531 aa10.89□□□□□ -0.67
CHCHD3P1-201ENST00000425516 DENND4BO75064 1496 aaPredicted RBP10.88□□□□□ -0.67
CHCHD3P1-201ENST00000425516 CAMSAP2Q08AD1 1489 aa10.88□□□□□ -0.67
CHCHD3P1-201ENST00000425516 PLEKHH2Q8IVE3 1493 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms