RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
IGHV3-47-201ENST00000425060 ARHGAP5Q13017 1502 aa28.58■■■□□ 2.17
IGHV3-47-201ENST00000425060 PREX2Q70Z35 1606 aa28.55■■■□□ 2.16
IGHV3-47-201ENST00000425060 POGZQ7Z3K3 1410 aa28.55■■■□□ 2.16
IGHV3-47-201ENST00000425060 ZMYM4Q5VZL5 1548 aa28.54■■■□□ 2.16
IGHV3-47-201ENST00000425060 MTUS2Q5JR59 1369 aa28.54■■■□□ 2.16
IGHV3-47-201ENST00000425060 CDC42BPAQ5VT25 1732 aa28.52■■■□□ 2.16
IGHV3-47-201ENST00000425060 GPATCH8Q9UKJ3 1502 aaKnown RBP28.51■■■□□ 2.15
IGHV3-47-201ENST00000425060 MAGI2Q86UL8 1455 aa28.49■■■□□ 2.15
IGHV3-47-201ENST00000425060 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
IGHV3-47-201ENST00000425060 ARHGEF40Q8TER5 1519 aa28.48■■■□□ 2.15
IGHV3-47-201ENST00000425060 YEATS2Q9ULM3 1422 aa28.45■■■□□ 2.15
IGHV3-47-201ENST00000425060 ARHGEF12Q9NZN5 1544 aa28.45■■■□□ 2.15
IGHV3-47-201ENST00000425060 AFAP1Q8N556 730 aa28.44■■■□□ 2.14
IGHV3-47-201ENST00000425060 TIAM1Q13009 1591 aa28.44■■■□□ 2.14
IGHV3-47-201ENST00000425060 ABCC1P33527 1531 aa28.43■■■□□ 2.14
IGHV3-47-201ENST00000425060 ZNF518AQ6AHZ1 1483 aa28.43■■■□□ 2.14
IGHV3-47-201ENST00000425060 CCNB3Q8WWL7 1395 aa28.43■■■□□ 2.14
IGHV3-47-201ENST00000425060 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
IGHV3-47-201ENST00000425060 KDM5CP41229 1560 aa28.41■■■□□ 2.14
IGHV3-47-201ENST00000425060 TRAPPC8Q9Y2L5 1435 aa28.39■■■□□ 2.14
IGHV3-47-201ENST00000425060 MAP3K1Q13233 1512 aa28.38■■■□□ 2.13
IGHV3-47-201ENST00000425060 SAMD9LQ8IVG5 1584 aa28.38■■■□□ 2.13
IGHV3-47-201ENST00000425060 CFDP1Q9UEE9 299 aaPredicted RBP28.38■■■□□ 2.13
IGHV3-47-201ENST00000425060 ITSN2Q9NZM3 1697 aa28.36■■■□□ 2.13
IGHV3-47-201ENST00000425060 ZNF777Q9ULD5 760 aaPredicted RBP28.36■■■□□ 2.13
IGHV3-47-201ENST00000425060 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
IGHV3-47-201ENST00000425060 LRRC9Q6ZRR7 1453 aa28.34■■■□□ 2.13
IGHV3-47-201ENST00000425060 ADAMTSL3P82987 1691 aa28.34■■■□□ 2.13
IGHV3-47-201ENST00000425060 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
IGHV3-47-201ENST00000425060 ARID4BQ4LE39 1312 aaPredicted RBP28.33■■■□□ 2.13
IGHV3-47-201ENST00000425060 KIAA1107Q9UPP5 1409 aa28.33■■■□□ 2.13
IGHV3-47-201ENST00000425060 ATP10AO60312 1499 aa28.33■■■□□ 2.13
IGHV3-47-201ENST00000425060 SIGLEC1Q9BZZ2 1709 aa28.32■■■□□ 2.12
IGHV3-47-201ENST00000425060 BCORL1Q5H9F3 1711 aa28.32■■■□□ 2.12
IGHV3-47-201ENST00000425060 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
IGHV3-47-201ENST00000425060 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
IGHV3-47-201ENST00000425060 HECW2Q9P2P5 1572 aa28.3■■■□□ 2.12
IGHV3-47-201ENST00000425060 HNRNPMP52272 730 aaKnown RBP eCLIP28.3■■■□□ 2.12
IGHV3-47-201ENST00000425060 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
IGHV3-47-201ENST00000425060 PLEKHH2Q8IVE3 1493 aa28.29■■■□□ 2.12
IGHV3-47-201ENST00000425060 C9orf84Q5VXU9 1444 aa28.27■■■□□ 2.12
IGHV3-47-201ENST00000425060 ZNF644Q9H582 1327 aaPredicted RBP28.27■■■□□ 2.12
IGHV3-47-201ENST00000425060 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
IGHV3-47-201ENST00000425060 KIDINS220Q9ULH0 1771 aa28.22■■■□□ 2.11
IGHV3-47-201ENST00000425060 ABCA6Q8N139 1617 aa28.21■■■□□ 2.11
IGHV3-47-201ENST00000425060 MBD5Q9P267 1494 aa28.21■■■□□ 2.11
IGHV3-47-201ENST00000425060 MYT1LQ9UL68 1186 aa28.21■■■□□ 2.11
IGHV3-47-201ENST00000425060 REREQ9P2R6 1566 aa28.2■■■□□ 2.11
IGHV3-47-201ENST00000425060 MADDQ8WXG6 1647 aa28.2■■■□□ 2.1
IGHV3-47-201ENST00000425060 PTPRMP28827 1452 aa28.19■■■□□ 2.1
IGHV3-47-201ENST00000425060 SPAG9O60271 1321 aaKnown RBP28.18■■■□□ 2.1
IGHV3-47-201ENST00000425060 APLP2Q06481 763 aa28.16■■■□□ 2.1
IGHV3-47-201ENST00000425060 MLECQ14165 292 aa28.14■■■□□ 2.1
IGHV3-47-201ENST00000425060 CAMSAP2Q08AD1 1489 aa28.13■■■□□ 2.09
IGHV3-47-201ENST00000425060 AGLP35573 1532 aa28.12■■■□□ 2.09
IGHV3-47-201ENST00000425060 INO80Q9ULG1 1556 aaPredicted RBP28.11■■■□□ 2.09
IGHV3-47-201ENST00000425060 ATP7AQ04656 1500 aa28.11■■■□□ 2.09
IGHV3-47-201ENST00000425060 RIMS1Q86UR5 1692 aaKnown RBP28.09■■■□□ 2.09
IGHV3-47-201ENST00000425060 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
IGHV3-47-201ENST00000425060 RSPH4AQ5TD94 716 aa28.08■■■□□ 2.09
IGHV3-47-201ENST00000425060 RTEL1-TNFRSF6BF6WH68 1400 aa28.07■■■□□ 2.08
IGHV3-47-201ENST00000425060 MIA2Q96PC5 1412 aa28.07■■■□□ 2.08
IGHV3-47-201ENST00000425060 CCDC141Q6ZP82 1450 aa28.05■■■□□ 2.08
IGHV3-47-201ENST00000425060 FER1L4A9Z1Z3 1794 aa28.03■■■□□ 2.08
IGHV3-47-201ENST00000425060 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
IGHV3-47-201ENST00000425060 PLXNC1O60486 1568 aa28■■■□□ 2.07
IGHV3-47-201ENST00000425060 A2MP01023 1474 aa28■■■□□ 2.07
IGHV3-47-201ENST00000425060 ADGBQ8N7X0 1667 aa27.95■■■□□ 2.07
IGHV3-47-201ENST00000425060 TSPY4P0CV99 314 aa27.93■■■□□ 2.06
IGHV3-47-201ENST00000425060 TSPY10P0CW01 314 aa27.93■■■□□ 2.06
IGHV3-47-201ENST00000425060 DHX29Q7Z478 1369 aaKnown RBP27.92■■■□□ 2.06
IGHV3-47-201ENST00000425060 FGD6Q6ZV73 1430 aa27.91■■■□□ 2.06
IGHV3-47-201ENST00000425060 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
IGHV3-47-201ENST00000425060 PLPPR3Q6T4P5 718 aa27.89■■■□□ 2.06
IGHV3-47-201ENST00000425060 MAST1Q9Y2H9 1570 aa27.89■■■□□ 2.05
IGHV3-47-201ENST00000425060 PTPN23Q9H3S7 1636 aa27.89■■■□□ 2.05
IGHV3-47-201ENST00000425060 TCOF1Q13428 1488 aaKnown RBP27.88■■■□□ 2.05
IGHV3-47-201ENST00000425060 CNTLNQ9NXG0 1405 aa27.85■■■□□ 2.05
IGHV3-47-201ENST00000425060 LMTK3Q96Q04 1460 aa27.85■■■□□ 2.05
IGHV3-47-201ENST00000425060 ESF1Q9H501 851 aaKnown RBP27.84■■■□□ 2.05
IGHV3-47-201ENST00000425060 ABCC5O15440 1437 aa27.83■■■□□ 2.05
IGHV3-47-201ENST00000425060 GGT6Q6P531 493 aa27.82■■■□□ 2.04
IGHV3-47-201ENST00000425060 PPP6R1Q9UPN7 881 aa27.82■■■□□ 2.04
IGHV3-47-201ENST00000425060 C3P01024 1663 aa27.81■■■□□ 2.04
IGHV3-47-201ENST00000425060 KIF3BO15066 747 aa27.78■■■□□ 2.04
IGHV3-47-201ENST00000425060 SHANK2Q9UPX8 1470 aa27.77■■■□□ 2.04
IGHV3-47-201ENST00000425060 DAPK1P53355 1430 aa27.77■■■□□ 2.04
IGHV3-47-201ENST00000425060 ZMYM3Q14202 1370 aa27.77■■■□□ 2.04
IGHV3-47-201ENST00000425060 MROH2AA6NES4 1674 aa27.76■■■□□ 2.03
IGHV3-47-201ENST00000425060 DNMT1P26358 1616 aaKnown RBP27.76■■■□□ 2.03
IGHV3-47-201ENST00000425060 SETD1BQ9UPS6 1966 aaKnown RBP27.75■■■□□ 2.03
IGHV3-47-201ENST00000425060 CROCC2H7BZ55 1655 aa27.74■■■□□ 2.03
IGHV3-47-201ENST00000425060 CLTCQ00610 1675 aaKnown RBP27.73■■■□□ 2.03
IGHV3-47-201ENST00000425060 PREX1Q8TCU6 1659 aa27.71■■■□□ 2.03
IGHV3-47-201ENST00000425060 HSPA2P54652 639 aa27.7■■■□□ 2.02
IGHV3-47-201ENST00000425060 DUOX2Q9NRD8 1548 aa27.68■■■□□ 2.02
IGHV3-47-201ENST00000425060 NPATQ14207 1427 aa27.67■■■□□ 2.02
IGHV3-47-201ENST00000425060 PPARGC1BQ86YN6 1023 aaKnown RBP27.67■■■□□ 2.02
IGHV3-47-201ENST00000425060 KIF15Q9NS87 1388 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms