RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
TPM3P9-201ENST00000424846 AKNAQ7Z591 1439 aa19.63■□□□□ 0.73
TPM3P9-201ENST00000424846 CNGB1Q14028 1251 aaPredicted RBP19.62■□□□□ 0.73
TPM3P9-201ENST00000424846 WDR62O43379 1518 aa19.61■□□□□ 0.73
TPM3P9-201ENST00000424846 ANKRD30BQ9BXX2 1392 aa19.61■□□□□ 0.73
TPM3P9-201ENST00000424846 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
TPM3P9-201ENST00000424846 MIA2Q96PC5 1412 aa19.6■□□□□ 0.73
TPM3P9-201ENST00000424846 PBRM1Q86U86 1689 aa19.6■□□□□ 0.73
TPM3P9-201ENST00000424846 KIF7Q2M1P5 1343 aa19.58■□□□□ 0.73
TPM3P9-201ENST00000424846 DAPK1P53355 1430 aa19.58■□□□□ 0.72
TPM3P9-201ENST00000424846 TEX14Q8IWB6 1497 aa19.58■□□□□ 0.72
TPM3P9-201ENST00000424846 ABCC5O15440 1437 aa19.57■□□□□ 0.72
TPM3P9-201ENST00000424846 RPRD2Q5VT52 1461 aaKnown RBP19.57■□□□□ 0.72
TPM3P9-201ENST00000424846 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
TPM3P9-201ENST00000424846 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
TPM3P9-201ENST00000424846 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
TPM3P9-201ENST00000424846 B4GALNT3Q6L9W6 998 aa19.55■□□□□ 0.72
TPM3P9-201ENST00000424846 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
TPM3P9-201ENST00000424846 SPATA31E1Q6ZUB1 1445 aa19.54■□□□□ 0.72
TPM3P9-201ENST00000424846 PPP4R2Q9NY27 417 aa19.51■□□□□ 0.71
TPM3P9-201ENST00000424846 ZNF608Q9ULD9 1512 aaPredicted RBP19.49■□□□□ 0.71
TPM3P9-201ENST00000424846 ZBED9Q6R2W3 1325 aa19.49■□□□□ 0.71
TPM3P9-201ENST00000424846 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
TPM3P9-201ENST00000424846 POLR3GLQ9BT43 218 aa19.49■□□□□ 0.71
TPM3P9-201ENST00000424846 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
TPM3P9-201ENST00000424846 ROCK1Q13464 1354 aa19.49■□□□□ 0.71
TPM3P9-201ENST00000424846 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
TPM3P9-201ENST00000424846 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
TPM3P9-201ENST00000424846 DISP1Q96F81 1524 aa19.47■□□□□ 0.71
TPM3P9-201ENST00000424846 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
TPM3P9-201ENST00000424846 PZPP20742 1482 aa19.46■□□□□ 0.71
TPM3P9-201ENST00000424846 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
TPM3P9-201ENST00000424846 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
TPM3P9-201ENST00000424846 DHX29Q7Z478 1369 aaKnown RBP19.43■□□□□ 0.7
TPM3P9-201ENST00000424846 BCORL1Q5H9F3 1711 aa19.42■□□□□ 0.7
TPM3P9-201ENST00000424846 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
TPM3P9-201ENST00000424846 ERICH6BQ5W0A0 696 aa19.41■□□□□ 0.7
TPM3P9-201ENST00000424846 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
TPM3P9-201ENST00000424846 CFDP1Q9UEE9 299 aaPredicted RBP19.38■□□□□ 0.69
TPM3P9-201ENST00000424846 CAMSAP2Q08AD1 1489 aa19.38■□□□□ 0.69
TPM3P9-201ENST00000424846 RAPGEF6Q8TEU7 1601 aa19.38■□□□□ 0.69
TPM3P9-201ENST00000424846 USP47Q96K76 1375 aa19.38■□□□□ 0.69
TPM3P9-201ENST00000424846 PKD2Q13563 968 aa19.38■□□□□ 0.69
TPM3P9-201ENST00000424846 MBD5Q9P267 1494 aa19.37■□□□□ 0.69
TPM3P9-201ENST00000424846 KIAA0586Q9BVV6 1533 aa19.37■□□□□ 0.69
TPM3P9-201ENST00000424846 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
TPM3P9-201ENST00000424846 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
TPM3P9-201ENST00000424846 KIF14Q15058 1648 aa19.34■□□□□ 0.69
TPM3P9-201ENST00000424846 GPATCH8Q9UKJ3 1502 aaKnown RBP19.33■□□□□ 0.68
TPM3P9-201ENST00000424846 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.68
TPM3P9-201ENST00000424846 ERICH6Q7L0X2 663 aa19.32■□□□□ 0.68
TPM3P9-201ENST00000424846 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
TPM3P9-201ENST00000424846 SMG6Q86US8 1419 aaKnown RBP19.3■□□□□ 0.68
TPM3P9-201ENST00000424846 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
TPM3P9-201ENST00000424846 KDM5CP41229 1560 aa19.28■□□□□ 0.68
TPM3P9-201ENST00000424846 NUDCQ9Y266 331 aa19.28■□□□□ 0.68
TPM3P9-201ENST00000424846 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
TPM3P9-201ENST00000424846 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
TPM3P9-201ENST00000424846 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
TPM3P9-201ENST00000424846 ADGBQ8N7X0 1667 aa19.25■□□□□ 0.67
TPM3P9-201ENST00000424846 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
TPM3P9-201ENST00000424846 FBLN2P98095 1184 aa19.24■□□□□ 0.67
TPM3P9-201ENST00000424846 PAK3O75914 559 aaPredicted RBP19.24■□□□□ 0.67
TPM3P9-201ENST00000424846 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
TPM3P9-201ENST00000424846 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
TPM3P9-201ENST00000424846 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
TPM3P9-201ENST00000424846 NUP155O75694 1391 aa19.23■□□□□ 0.67
TPM3P9-201ENST00000424846 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
TPM3P9-201ENST00000424846 CROCC2H7BZ55 1655 aa19.22■□□□□ 0.67
TPM3P9-201ENST00000424846 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
TPM3P9-201ENST00000424846 ANKRD30AQ9BXX3 1397 aa19.22■□□□□ 0.67
TPM3P9-201ENST00000424846 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
TPM3P9-201ENST00000424846 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
TPM3P9-201ENST00000424846 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
TPM3P9-201ENST00000424846 CCDC136Q96JN2 1154 aa19.21■□□□□ 0.67
TPM3P9-201ENST00000424846 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
TPM3P9-201ENST00000424846 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
TPM3P9-201ENST00000424846 RALGAPBQ86X10 1494 aa19.18■□□□□ 0.66
TPM3P9-201ENST00000424846 DCAF11Q8TEB1 546 aa19.18■□□□□ 0.66
TPM3P9-201ENST00000424846 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
TPM3P9-201ENST00000424846 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
TPM3P9-201ENST00000424846 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.668e-7■■■■□ 23
TPM3P9-201ENST00000424846 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
TPM3P9-201ENST00000424846 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
TPM3P9-201ENST00000424846 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
TPM3P9-201ENST00000424846 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.65
TPM3P9-201ENST00000424846 NBR1Q14596 966 aa19.13■□□□□ 0.65
TPM3P9-201ENST00000424846 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
TPM3P9-201ENST00000424846 LRPPRCP42704 1394 aaKnown RBP19.12■□□□□ 0.65
TPM3P9-201ENST00000424846 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
TPM3P9-201ENST00000424846 PLEKHD1A6NEE1 506 aa19.11■□□□□ 0.65
TPM3P9-201ENST00000424846 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
TPM3P9-201ENST00000424846 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
TPM3P9-201ENST00000424846 ATP10BO94823 1461 aa19.09■□□□□ 0.65
TPM3P9-201ENST00000424846 MYBBP1AQ9BQG0 1328 aaKnown RBP19.09■□□□□ 0.65
TPM3P9-201ENST00000424846 NBPF1Q3BBV0 1214 aa19.08■□□□□ 0.65
TPM3P9-201ENST00000424846 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.65
TPM3P9-201ENST00000424846 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
TPM3P9-201ENST00000424846 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
TPM3P9-201ENST00000424846 DEKP35659 375 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms