RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ARID4BQ4LE39 1312 aaPredicted RBP29.86■■■□□ 2.37
NUP50-207ENST00000424634 POGZQ7Z3K3 1410 aa29.86■■■□□ 2.37
NUP50-207ENST00000424634 YEATS2Q9ULM3 1422 aa29.86■■■□□ 2.37
NUP50-207ENST00000424634 ARHGAP5Q13017 1502 aa29.84■■■□□ 2.37
NUP50-207ENST00000424634 BCORL1Q5H9F3 1711 aa29.84■■■□□ 2.37
NUP50-207ENST00000424634 CDC42BPBQ9Y5S2 1711 aa29.84■■■□□ 2.37
NUP50-207ENST00000424634 MAGI2Q86UL8 1455 aa29.82■■■□□ 2.36
NUP50-207ENST00000424634 ZFYVE16Q7Z3T8 1539 aa29.81■■■□□ 2.36
NUP50-207ENST00000424634 SIGLEC1Q9BZZ2 1709 aa29.79■■■□□ 2.36
NUP50-207ENST00000424634 CEP162Q5TB80 1403 aa29.77■■■□□ 2.36
NUP50-207ENST00000424634 PTPRMP28827 1452 aa29.76■■■□□ 2.35
NUP50-207ENST00000424634 PREX2Q70Z35 1606 aa29.76■■■□□ 2.35
NUP50-207ENST00000424634 AFAP1Q8N556 730 aa29.76■■■□□ 2.35
NUP50-207ENST00000424634 HECW2Q9P2P5 1572 aa29.75■■■□□ 2.35
NUP50-207ENST00000424634 MADDQ8WXG6 1647 aa29.74■■■□□ 2.35
NUP50-207ENST00000424634 CDC42BPAQ5VT25 1732 aa29.74■■■□□ 2.35
NUP50-207ENST00000424634 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
NUP50-207ENST00000424634 ZNF518AQ6AHZ1 1483 aa29.71■■■□□ 2.35
NUP50-207ENST00000424634 ARHGEF12Q9NZN5 1544 aa29.7■■■□□ 2.34
NUP50-207ENST00000424634 ATP10AO60312 1499 aa29.69■■■□□ 2.34
NUP50-207ENST00000424634 KDM5CP41229 1560 aa29.69■■■□□ 2.34
NUP50-207ENST00000424634 ABCC1P33527 1531 aa29.66■■■□□ 2.34
NUP50-207ENST00000424634 GPATCH8Q9UKJ3 1502 aaKnown RBP29.66■■■□□ 2.34
NUP50-207ENST00000424634 TRAPPC8Q9Y2L5 1435 aa29.65■■■□□ 2.34
NUP50-207ENST00000424634 RIMS1Q86UR5 1692 aaKnown RBP29.64■■■□□ 2.34
NUP50-207ENST00000424634 MLECQ14165 292 aa29.64■■■□□ 2.34
NUP50-207ENST00000424634 C9orf84Q5VXU9 1444 aa29.62■■■□□ 2.33
NUP50-207ENST00000424634 ITSN2Q9NZM3 1697 aa29.62■■■□□ 2.33
NUP50-207ENST00000424634 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
NUP50-207ENST00000424634 ZNF777Q9ULD5 760 aaPredicted RBP29.6■■■□□ 2.33
NUP50-207ENST00000424634 MYT1LQ9UL68 1186 aa29.59■■■□□ 2.33
NUP50-207ENST00000424634 MLH3Q9UHC1 1453 aa29.59■■■□□ 2.33
NUP50-207ENST00000424634 SAMD9LQ8IVG5 1584 aa29.58■■■□□ 2.33
NUP50-207ENST00000424634 DIP2CQ9Y2E4 1556 aa29.56■■■□□ 2.32
NUP50-207ENST00000424634 CCNB3Q8WWL7 1395 aa29.54■■■□□ 2.32
NUP50-207ENST00000424634 CFDP1Q9UEE9 299 aaPredicted RBP29.54■■■□□ 2.32
NUP50-207ENST00000424634 ABCA6Q8N139 1617 aa29.53■■■□□ 2.32
NUP50-207ENST00000424634 HNRNPMP52272 730 aaKnown RBP eCLIP29.53■■■□□ 2.32
NUP50-207ENST00000424634 FER1L4A9Z1Z3 1794 aa29.52■■■□□ 2.32
NUP50-207ENST00000424634 PLPPR3Q6T4P5 718 aa29.51■■■□□ 2.31
NUP50-207ENST00000424634 KIDINS220Q9ULH0 1771 aa29.51■■■□□ 2.31
NUP50-207ENST00000424634 EHBP1L1Q8N3D4 1523 aa29.5■■■□□ 2.31
NUP50-207ENST00000424634 SYCP2Q9BX26 1530 aa29.5■■■□□ 2.31
NUP50-207ENST00000424634 REREQ9P2R6 1566 aa29.48■■■□□ 2.31
NUP50-207ENST00000424634 TIAM1Q13009 1591 aa29.47■■■□□ 2.31
NUP50-207ENST00000424634 KIAA1107Q9UPP5 1409 aa29.46■■■□□ 2.31
NUP50-207ENST00000424634 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.3
NUP50-207ENST00000424634 LMTK3Q96Q04 1460 aa29.44■■■□□ 2.3
NUP50-207ENST00000424634 VPS8Q8N3P4 1428 aa29.43■■■□□ 2.3
NUP50-207ENST00000424634 PLEKHH2Q8IVE3 1493 aa29.42■■■□□ 2.3
NUP50-207ENST00000424634 SPAG9O60271 1321 aaKnown RBP29.42■■■□□ 2.3
NUP50-207ENST00000424634 AGLP35573 1532 aa29.4■■■□□ 2.3
NUP50-207ENST00000424634 CEBPAP49715 358 aaPredicted RBP29.39■■■□□ 2.3
NUP50-207ENST00000424634 NCOA2Q15596 1464 aa29.37■■■□□ 2.29
NUP50-207ENST00000424634 SUPT6HQ7KZ85 1726 aaKnown RBP29.35■■■□□ 2.29
NUP50-207ENST00000424634 MBD5Q9P267 1494 aa29.34■■■□□ 2.29
NUP50-207ENST00000424634 ATP7AQ04656 1500 aa29.34■■■□□ 2.29
NUP50-207ENST00000424634 HSPA2P54652 639 aa29.33■■■□□ 2.29
NUP50-207ENST00000424634 INO80Q9ULG1 1556 aaPredicted RBP29.32■■■□□ 2.28
NUP50-207ENST00000424634 LRRC9Q6ZRR7 1453 aa29.3■■■□□ 2.28
NUP50-207ENST00000424634 KANK4Q5T7N3 995 aaPredicted RBP29.28■■■□□ 2.28
NUP50-207ENST00000424634 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
NUP50-207ENST00000424634 A2MP01023 1474 aa29.24■■■□□ 2.27
NUP50-207ENST00000424634 C3P01024 1663 aa29.24■■■□□ 2.27
NUP50-207ENST00000424634 PLXNC1O60486 1568 aa29.23■■■□□ 2.27
NUP50-207ENST00000424634 ILDR1Q86SU0 546 aaPredicted RBP29.23■■■□□ 2.27
NUP50-207ENST00000424634 ESF1Q9H501 851 aaKnown RBP29.23■■■□□ 2.27
NUP50-207ENST00000424634 CAMSAP2Q08AD1 1489 aa29.23■■■□□ 2.27
NUP50-207ENST00000424634 SETD1BQ9UPS6 1966 aaKnown RBP29.22■■■□□ 2.27
NUP50-207ENST00000424634 PREX1Q8TCU6 1659 aa29.21■■■□□ 2.27
NUP50-207ENST00000424634 RTEL1-TNFRSF6BF6WH68 1400 aa29.2■■■□□ 2.26
NUP50-207ENST00000424634 ADGBQ8N7X0 1667 aa29.18■■■□□ 2.26
NUP50-207ENST00000424634 CNTLNQ9NXG0 1405 aa29.17■■■□□ 2.26
NUP50-207ENST00000424634 CCDC141Q6ZP82 1450 aa29.16■■■□□ 2.26
NUP50-207ENST00000424634 RSPH4AQ5TD94 716 aa29.15■■■□□ 2.26
NUP50-207ENST00000424634 GGT6Q6P531 493 aa29.13■■■□□ 2.25
NUP50-207ENST00000424634 ZMYM3Q14202 1370 aa29.12■■■□□ 2.25
NUP50-207ENST00000424634 DHX29Q7Z478 1369 aaKnown RBP29.11■■■□□ 2.25
NUP50-207ENST00000424634 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
NUP50-207ENST00000424634 ARHGEF5Q12774 1597 aa29.1■■■□□ 2.25
NUP50-207ENST00000424634 MROH2AA6NES4 1674 aa29.1■■■□□ 2.25
NUP50-207ENST00000424634 CLTCQ00610 1675 aaKnown RBP29.09■■■□□ 2.25
NUP50-207ENST00000424634 MYOM3Q5VTT5 1437 aa29.06■■■□□ 2.24
NUP50-207ENST00000424634 TSPY4P0CV99 314 aa29.04■■■□□ 2.24
NUP50-207ENST00000424634 TSPY10P0CW01 314 aa29.04■■■□□ 2.24
NUP50-207ENST00000424634 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
NUP50-207ENST00000424634 STRCQ7RTU9 1775 aa29.03■■■□□ 2.24
NUP50-207ENST00000424634 APLP2Q06481 763 aa29.03■■■□□ 2.24
NUP50-207ENST00000424634 PPP6R1Q9UPN7 881 aa29.03■■■□□ 2.24
NUP50-207ENST00000424634 KIF3BO15066 747 aa29.01■■■□□ 2.23
NUP50-207ENST00000424634 NPATQ14207 1427 aa29.01■■■□□ 2.23
NUP50-207ENST00000424634 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
NUP50-207ENST00000424634 MAST1Q9Y2H9 1570 aa28.96■■■□□ 2.23
NUP50-207ENST00000424634 FBXO41Q8TF61 875 aa28.92■■■□□ 2.22
NUP50-207ENST00000424634 DMRT2Q9Y5R5 561 aa28.9■■■□□ 2.22
NUP50-207ENST00000424634 PTPN23Q9H3S7 1636 aa28.89■■■□□ 2.22
NUP50-207ENST00000424634 WASHC2CQ9Y4E1 1318 aa28.86■■■□□ 2.21
NUP50-207ENST00000424634 MYO3AQ8NEV4 1616 aa28.86■■■□□ 2.21
NUP50-207ENST00000424634 ABCC5O15440 1437 aa28.86■■■□□ 2.21
NUP50-207ENST00000424634 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms