RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
SEMA3A-203ENST00000424555 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
SEMA3A-203ENST00000424555 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
SEMA3A-203ENST00000424555 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
SEMA3A-203ENST00000424555 NLRP6P59044 892 aa12.67□□□□□ -0.38
SEMA3A-203ENST00000424555 RGL2O15211 777 aa12.66□□□□□ -0.38
SEMA3A-203ENST00000424555 STK25O00506 426 aa12.63□□□□□ -0.39
SEMA3A-203ENST00000424555 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
SEMA3A-203ENST00000424555 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
SEMA3A-203ENST00000424555 ERBB3P21860 1342 aa12.61□□□□□ -0.39
SEMA3A-203ENST00000424555 RIMBP2O15034 1052 aa12.58□□□□□ -0.4
SEMA3A-203ENST00000424555 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
SEMA3A-203ENST00000424555 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
SEMA3A-203ENST00000424555 KIF3CO14782 793 aa12.54□□□□□ -0.4
SEMA3A-203ENST00000424555 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
SEMA3A-203ENST00000424555 CCDC180Q9P1Z9 1646 aa12.53□□□□□ -0.4
SEMA3A-203ENST00000424555 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEMA3A-203ENST00000424555 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
SEMA3A-203ENST00000424555 PPP1R37O75864 691 aa12.5□□□□□ -0.41
SEMA3A-203ENST00000424555 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
SEMA3A-203ENST00000424555 ZCCHC6Q5VYS8 1495 aaKnown RBP12.47□□□□□ -0.41
SEMA3A-203ENST00000424555 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
SEMA3A-203ENST00000424555 SLC34A2O95436 690 aa12.36□□□□□ -0.43
SEMA3A-203ENST00000424555 NUDT7P0C024 238 aa12.36□□□□□ -0.43
SEMA3A-203ENST00000424555 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
SEMA3A-203ENST00000424555 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
SEMA3A-203ENST00000424555 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
SEMA3A-203ENST00000424555 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
SEMA3A-203ENST00000424555 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
SEMA3A-203ENST00000424555 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
SEMA3A-203ENST00000424555 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
SEMA3A-203ENST00000424555 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
SEMA3A-203ENST00000424555 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
SEMA3A-203ENST00000424555 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
SEMA3A-203ENST00000424555 NKX1-1Q15270 411 aaPredicted RBP12.27□□□□□ -0.45
SEMA3A-203ENST00000424555 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
SEMA3A-203ENST00000424555 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEMA3A-203ENST00000424555 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
SEMA3A-203ENST00000424555 FOXK1P85037 733 aa12.23□□□□□ -0.45
SEMA3A-203ENST00000424555 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
SEMA3A-203ENST00000424555 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
SEMA3A-203ENST00000424555 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
SEMA3A-203ENST00000424555 PLPP6Q8IY26 295 aa12.22□□□□□ -0.45
SEMA3A-203ENST00000424555 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
SEMA3A-203ENST00000424555 DSG2Q14126 1118 aa12.21□□□□□ -0.45
SEMA3A-203ENST00000424555 PBX2P40425 430 aa12.19□□□□□ -0.46
SEMA3A-203ENST00000424555 PTGER2P43116 358 aa12.18□□□□□ -0.46
SEMA3A-203ENST00000424555 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
SEMA3A-203ENST00000424555 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
SEMA3A-203ENST00000424555 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
SEMA3A-203ENST00000424555 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
SEMA3A-203ENST00000424555 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
SEMA3A-203ENST00000424555 PSEN2P49810 448 aa12.08□□□□□ -0.48
SEMA3A-203ENST00000424555 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
SEMA3A-203ENST00000424555 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
SEMA3A-203ENST00000424555 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
SEMA3A-203ENST00000424555 GTPBP6O43824 516 aaPredicted RBP12.05□□□□□ -0.48
SEMA3A-203ENST00000424555 HRO43593 1189 aa12.03□□□□□ -0.48
SEMA3A-203ENST00000424555 TBC1D12O60347 775 aa12.03□□□□□ -0.48
SEMA3A-203ENST00000424555 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
SEMA3A-203ENST00000424555 TK2O00142 265 aa12□□□□□ -0.49
SEMA3A-203ENST00000424555 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
SEMA3A-203ENST00000424555 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
SEMA3A-203ENST00000424555 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
SEMA3A-203ENST00000424555 PDE4AP27815 886 aa11.95□□□□□ -0.5
SEMA3A-203ENST00000424555 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
SEMA3A-203ENST00000424555 DCAF8L2P0C7V8 631 aa11.93□□□□□ -0.5
SEMA3A-203ENST00000424555 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
SEMA3A-203ENST00000424555 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
SEMA3A-203ENST00000424555 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
SEMA3A-203ENST00000424555 HCSTQ9UBK5 93 aa11.92□□□□□ -0.5
SEMA3A-203ENST00000424555 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
SEMA3A-203ENST00000424555 FOSBP53539 338 aa11.91□□□□□ -0.5
SEMA3A-203ENST00000424555 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
SEMA3A-203ENST00000424555 MFSD10Q14728 455 aa11.89□□□□□ -0.51
SEMA3A-203ENST00000424555 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
SEMA3A-203ENST00000424555 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
SEMA3A-203ENST00000424555 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
SEMA3A-203ENST00000424555 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
SEMA3A-203ENST00000424555 EVI5O60447 810 aa11.86□□□□□ -0.51
SEMA3A-203ENST00000424555 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
SEMA3A-203ENST00000424555 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
SEMA3A-203ENST00000424555 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
SEMA3A-203ENST00000424555 SLC4A5Q9BY07 1137 aa11.84□□□□□ -0.51
SEMA3A-203ENST00000424555 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
SEMA3A-203ENST00000424555 BHMG1C9JSJ3 638 aaPredicted RBP11.82□□□□□ -0.52
SEMA3A-203ENST00000424555 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
SEMA3A-203ENST00000424555 KCNH8Q96L42 1107 aa11.8□□□□□ -0.52
SEMA3A-203ENST00000424555 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
SEMA3A-203ENST00000424555 PTPREP23469 700 aa11.79□□□□□ -0.52
SEMA3A-203ENST00000424555 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
SEMA3A-203ENST00000424555 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
SEMA3A-203ENST00000424555 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
SEMA3A-203ENST00000424555 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
SEMA3A-203ENST00000424555 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
SEMA3A-203ENST00000424555 PTPN5P54829 565 aa11.73□□□□□ -0.53
SEMA3A-203ENST00000424555 ABCC9O60706 1549 aa11.7□□□□□ -0.54
SEMA3A-203ENST00000424555 COL9A1P20849 921 aa11.7□□□□□ -0.54
SEMA3A-203ENST00000424555 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
SEMA3A-203ENST00000424555 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms