RNA–Protein interactions for RNA: ENST00000424369.5

TRIM6-204, Transcript of tripartite motif containing 6, humanhuman

TSL 3

Gene TRIM6, Length 468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-204ENST00000424369 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
TRIM6-204ENST00000424369 FRMPD1Q5SYB0 1578 aa16.6■□□□□ 0.25
TRIM6-204ENST00000424369 CDC42BPBQ9Y5S2 1711 aa16.6■□□□□ 0.25
TRIM6-204ENST00000424369 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
TRIM6-204ENST00000424369 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
TRIM6-204ENST00000424369 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.24
TRIM6-204ENST00000424369 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
TRIM6-204ENST00000424369 TIAM1Q13009 1591 aa16.57■□□□□ 0.24
TRIM6-204ENST00000424369 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
TRIM6-204ENST00000424369 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRIM6-204ENST00000424369 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
TRIM6-204ENST00000424369 CFAP74Q9C0B2 1584 aa16.56■□□□□ 0.24
TRIM6-204ENST00000424369 ARHGEF12Q9NZN5 1544 aa16.56■□□□□ 0.24
TRIM6-204ENST00000424369 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
TRIM6-204ENST00000424369 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
TRIM6-204ENST00000424369 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
TRIM6-204ENST00000424369 APLP2Q06481 763 aa16.54■□□□□ 0.24
TRIM6-204ENST00000424369 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
TRIM6-204ENST00000424369 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
TRIM6-204ENST00000424369 YEATS2Q9ULM3 1422 aa16.53■□□□□ 0.24
TRIM6-204ENST00000424369 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
TRIM6-204ENST00000424369 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
TRIM6-204ENST00000424369 NCOA2Q15596 1464 aa16.53■□□□□ 0.24
TRIM6-204ENST00000424369 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
TRIM6-204ENST00000424369 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
TRIM6-204ENST00000424369 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
TRIM6-204ENST00000424369 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
TRIM6-204ENST00000424369 ABCC1P33527 1531 aa16.48■□□□□ 0.23
TRIM6-204ENST00000424369 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
TRIM6-204ENST00000424369 ZMYM4Q5VZL5 1548 aa16.46■□□□□ 0.23
TRIM6-204ENST00000424369 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
TRIM6-204ENST00000424369 ZFYVE16Q7Z3T8 1539 aa16.45■□□□□ 0.22
TRIM6-204ENST00000424369 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
TRIM6-204ENST00000424369 MLECQ14165 292 aa16.45■□□□□ 0.22
TRIM6-204ENST00000424369 MAGI2Q86UL8 1455 aa16.44■□□□□ 0.22
TRIM6-204ENST00000424369 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
TRIM6-204ENST00000424369 SIGLEC1Q9BZZ2 1709 aa16.43■□□□□ 0.22
TRIM6-204ENST00000424369 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
TRIM6-204ENST00000424369 SPAG9O60271 1321 aaKnown RBP16.43■□□□□ 0.22
TRIM6-204ENST00000424369 ATP10AO60312 1499 aa16.42■□□□□ 0.22
TRIM6-204ENST00000424369 KIAA1107Q9UPP5 1409 aa16.42■□□□□ 0.22
TRIM6-204ENST00000424369 KDM5CP41229 1560 aa16.42■□□□□ 0.22
TRIM6-204ENST00000424369 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
TRIM6-204ENST00000424369 MLH3Q9UHC1 1453 aa16.4■□□□□ 0.22
TRIM6-204ENST00000424369 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
TRIM6-204ENST00000424369 CAMSAP2Q08AD1 1489 aa16.38■□□□□ 0.21
TRIM6-204ENST00000424369 MYOM3Q5VTT5 1437 aa16.37■□□□□ 0.21
TRIM6-204ENST00000424369 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
TRIM6-204ENST00000424369 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
TRIM6-204ENST00000424369 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
TRIM6-204ENST00000424369 KIDINS220Q9ULH0 1771 aa16.36■□□□□ 0.21
TRIM6-204ENST00000424369 DIP2CQ9Y2E4 1556 aa16.36■□□□□ 0.21
TRIM6-204ENST00000424369 ABCA6Q8N139 1617 aa16.35■□□□□ 0.21
TRIM6-204ENST00000424369 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
TRIM6-204ENST00000424369 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
TRIM6-204ENST00000424369 MIA2Q96PC5 1412 aa16.31■□□□□ 0.2
TRIM6-204ENST00000424369 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
TRIM6-204ENST00000424369 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
TRIM6-204ENST00000424369 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
TRIM6-204ENST00000424369 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
TRIM6-204ENST00000424369 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
TRIM6-204ENST00000424369 PTPRMP28827 1452 aa16.29■□□□□ 0.2
TRIM6-204ENST00000424369 CCDC141Q6ZP82 1450 aa16.29■□□□□ 0.2
TRIM6-204ENST00000424369 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
TRIM6-204ENST00000424369 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
TRIM6-204ENST00000424369 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
TRIM6-204ENST00000424369 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
TRIM6-204ENST00000424369 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
TRIM6-204ENST00000424369 GGT6Q6P531 493 aa16.26■□□□□ 0.19
TRIM6-204ENST00000424369 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
TRIM6-204ENST00000424369 A2MP01023 1474 aa16.26■□□□□ 0.19
TRIM6-204ENST00000424369 PTPN23Q9H3S7 1636 aa16.26■□□□□ 0.19
TRIM6-204ENST00000424369 RIMS1Q86UR5 1692 aaKnown RBP16.25■□□□□ 0.19
TRIM6-204ENST00000424369 ABCC5O15440 1437 aa16.25■□□□□ 0.19
TRIM6-204ENST00000424369 ARHGEF5Q12774 1597 aa16.25■□□□□ 0.19
TRIM6-204ENST00000424369 REREQ9P2R6 1566 aa16.24■□□□□ 0.19
TRIM6-204ENST00000424369 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
TRIM6-204ENST00000424369 KIF3BO15066 747 aa16.23■□□□□ 0.19
TRIM6-204ENST00000424369 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
TRIM6-204ENST00000424369 AGLP35573 1532 aa16.23■□□□□ 0.19
TRIM6-204ENST00000424369 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
TRIM6-204ENST00000424369 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
TRIM6-204ENST00000424369 DAPK1P53355 1430 aa16.19■□□□□ 0.18
TRIM6-204ENST00000424369 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
TRIM6-204ENST00000424369 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
TRIM6-204ENST00000424369 PLXNC1O60486 1568 aa16.18■□□□□ 0.18
TRIM6-204ENST00000424369 ITGAEP38570 1179 aa16.18■□□□□ 0.18
TRIM6-204ENST00000424369 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
TRIM6-204ENST00000424369 MAST1Q9Y2H9 1570 aa16.15■□□□□ 0.18
TRIM6-204ENST00000424369 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
TRIM6-204ENST00000424369 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
TRIM6-204ENST00000424369 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
TRIM6-204ENST00000424369 HSPA2P54652 639 aa16.13■□□□□ 0.17
TRIM6-204ENST00000424369 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
TRIM6-204ENST00000424369 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
TRIM6-204ENST00000424369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRIM6-204ENST00000424369 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
TRIM6-204ENST00000424369 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
TRIM6-204ENST00000424369 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
TRIM6-204ENST00000424369 ANKRD30AQ9BXX3 1397 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms