RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 FYCO1Q9BQS8 1478 aa34.25■■■■□ 3.07
SMIM12-202ENST00000423898 HECW2Q9P2P5 1572 aa34.24■■■■□ 3.07
SMIM12-202ENST00000423898 EFCAB2Q5VUJ9 269 aa34.24■■■■□ 3.07
SMIM12-202ENST00000423898 ARHGAP5Q13017 1502 aa34.24■■■■□ 3.07
SMIM12-202ENST00000423898 ZFYVE16Q7Z3T8 1539 aa34.24■■■■□ 3.07
SMIM12-202ENST00000423898 POGZQ7Z3K3 1410 aa34.23■■■■□ 3.07
SMIM12-202ENST00000423898 YEATS2Q9ULM3 1422 aa34.19■■■■□ 3.06
SMIM12-202ENST00000423898 MAGI2Q86UL8 1455 aa34.17■■■■□ 3.06
SMIM12-202ENST00000423898 MADDQ8WXG6 1647 aa34.17■■■■□ 3.06
SMIM12-202ENST00000423898 CDC42BPBQ9Y5S2 1711 aa34.16■■■■□ 3.06
SMIM12-202ENST00000423898 PTPRMP28827 1452 aa34.15■■■■□ 3.06
SMIM12-202ENST00000423898 PREX2Q70Z35 1606 aa34.13■■■■□ 3.05
SMIM12-202ENST00000423898 SIGLEC1Q9BZZ2 1709 aa34.12■■■■□ 3.05
SMIM12-202ENST00000423898 ZNF518AQ6AHZ1 1483 aa34.08■■■■□ 3.05
SMIM12-202ENST00000423898 RIMS1Q86UR5 1692 aaKnown RBP34.08■■■■□ 3.05
SMIM12-202ENST00000423898 CDC42BPAQ5VT25 1732 aa34.06■■■■□ 3.04
SMIM12-202ENST00000423898 KDM5CP41229 1560 aa34.02■■■■□ 3.04
SMIM12-202ENST00000423898 CEP162Q5TB80 1403 aa34.01■■■■□ 3.03
SMIM12-202ENST00000423898 ATP10AO60312 1499 aa34.01■■■■□ 3.03
SMIM12-202ENST00000423898 AFAP1Q8N556 730 aa34■■■■□ 3.03
SMIM12-202ENST00000423898 ABCC1P33527 1531 aa33.99■■■■□ 3.03
SMIM12-202ENST00000423898 C9orf84Q5VXU9 1444 aa33.99■■■■□ 3.03
SMIM12-202ENST00000423898 MYT1LQ9UL68 1186 aa33.98■■■■□ 3.03
SMIM12-202ENST00000423898 ITSN2Q9NZM3 1697 aa33.98■■■■□ 3.03
SMIM12-202ENST00000423898 MLECQ14165 292 aa33.97■■■■□ 3.03
SMIM12-202ENST00000423898 FER1L4A9Z1Z3 1794 aa33.95■■■■□ 3.03
SMIM12-202ENST00000423898 ARHGEF12Q9NZN5 1544 aa33.93■■■■□ 3.02
SMIM12-202ENST00000423898 TRAPPC8Q9Y2L5 1435 aa33.91■■■■□ 3.02
SMIM12-202ENST00000423898 DIP2CQ9Y2E4 1556 aa33.9■■■■□ 3.02
SMIM12-202ENST00000423898 MTUS2Q5JR59 1369 aa33.9■■■■□ 3.02
SMIM12-202ENST00000423898 PLPPR3Q6T4P5 718 aa33.9■■■■□ 3.02
SMIM12-202ENST00000423898 ZNF777Q9ULD5 760 aaPredicted RBP33.89■■■■□ 3.02
SMIM12-202ENST00000423898 ABCA6Q8N139 1617 aa33.88■■■■□ 3.01
SMIM12-202ENST00000423898 GPATCH8Q9UKJ3 1502 aaKnown RBP33.88■■■■□ 3.01
SMIM12-202ENST00000423898 SAMD9LQ8IVG5 1584 aa33.87■■■■□ 3.01
SMIM12-202ENST00000423898 MLH3Q9UHC1 1453 aa33.86■■■■□ 3.01
SMIM12-202ENST00000423898 SYCP2Q9BX26 1530 aa33.83■■■■□ 3.01
SMIM12-202ENST00000423898 CCNB3Q8WWL7 1395 aa33.83■■■■□ 3.01
SMIM12-202ENST00000423898 EHBP1L1Q8N3D4 1523 aa33.81■■■■□ 3
SMIM12-202ENST00000423898 REREQ9P2R6 1566 aa33.8■■■■□ 3
SMIM12-202ENST00000423898 KIDINS220Q9ULH0 1771 aa33.8■■■■□ 3
SMIM12-202ENST00000423898 LMTK3Q96Q04 1460 aa33.79■■■■□ 3
SMIM12-202ENST00000423898 LOC105371045A0A1W2PR82 267 aa33.78■■■■□ 3
SMIM12-202ENST00000423898 CFDP1Q9UEE9 299 aaPredicted RBP33.78■■■■□ 3
SMIM12-202ENST00000423898 TIAM1Q13009 1591 aa33.74■■■□□ 2.99
SMIM12-202ENST00000423898 HNRNPMP52272 730 aaKnown RBP eCLIP33.73■■■□□ 2.99
SMIM12-202ENST00000423898 PLEKHH2Q8IVE3 1493 aa33.72■■■□□ 2.99
SMIM12-202ENST00000423898 KIAA1107Q9UPP5 1409 aa33.69■■■□□ 2.98
SMIM12-202ENST00000423898 AGLP35573 1532 aa33.68■■■□□ 2.98
SMIM12-202ENST00000423898 SPAG9O60271 1321 aaKnown RBP33.67■■■□□ 2.98
SMIM12-202ENST00000423898 SUPT6HQ7KZ85 1726 aaKnown RBP33.65■■■□□ 2.98
SMIM12-202ENST00000423898 ATP7AQ04656 1500 aa33.64■■■□□ 2.98
SMIM12-202ENST00000423898 CEBPAP49715 358 aaPredicted RBP33.63■■■□□ 2.97
SMIM12-202ENST00000423898 VPS8Q8N3P4 1428 aa33.62■■■□□ 2.97
SMIM12-202ENST00000423898 HSPA2P54652 639 aa33.62■■■□□ 2.97
SMIM12-202ENST00000423898 INO80Q9ULG1 1556 aaPredicted RBP33.62■■■□□ 2.97
SMIM12-202ENST00000423898 ILDR1Q86SU0 546 aaPredicted RBP33.6■■■□□ 2.97
SMIM12-202ENST00000423898 PREX1Q8TCU6 1659 aa33.6■■■□□ 2.97
SMIM12-202ENST00000423898 ZNF644Q9H582 1327 aaPredicted RBP33.59■■■□□ 2.97
SMIM12-202ENST00000423898 NCOA2Q15596 1464 aa33.58■■■□□ 2.97
SMIM12-202ENST00000423898 ESF1Q9H501 851 aaKnown RBP33.58■■■□□ 2.97
SMIM12-202ENST00000423898 C3P01024 1663 aa33.55■■■□□ 2.96
SMIM12-202ENST00000423898 MBD5Q9P267 1494 aa33.5■■■□□ 2.95
SMIM12-202ENST00000423898 A2MP01023 1474 aa33.5■■■□□ 2.95
SMIM12-202ENST00000423898 PLXNC1O60486 1568 aa33.49■■■□□ 2.95
SMIM12-202ENST00000423898 ADGBQ8N7X0 1667 aa33.48■■■□□ 2.95
SMIM12-202ENST00000423898 LRRC9Q6ZRR7 1453 aa33.48■■■□□ 2.95
SMIM12-202ENST00000423898 CAMSAP2Q08AD1 1489 aa33.47■■■□□ 2.95
SMIM12-202ENST00000423898 SETD1BQ9UPS6 1966 aaKnown RBP33.47■■■□□ 2.95
SMIM12-202ENST00000423898 CNTLNQ9NXG0 1405 aa33.46■■■□□ 2.95
SMIM12-202ENST00000423898 UHRF1BP1Q6BDS2 1440 aa33.45■■■□□ 2.94
SMIM12-202ENST00000423898 MROH2AA6NES4 1674 aa33.42■■■□□ 2.94
SMIM12-202ENST00000423898 CCDC141Q6ZP82 1450 aa33.41■■■□□ 2.94
SMIM12-202ENST00000423898 RTEL1-TNFRSF6BF6WH68 1400 aa33.39■■■□□ 2.94
SMIM12-202ENST00000423898 CLTCQ00610 1675 aaKnown RBP33.39■■■□□ 2.94
SMIM12-202ENST00000423898 MAP3K1Q13233 1512 aa33.38■■■□□ 2.93
SMIM12-202ENST00000423898 KANK4Q5T7N3 995 aaPredicted RBP33.35■■■□□ 2.93
SMIM12-202ENST00000423898 GGT6Q6P531 493 aa33.35■■■□□ 2.93
SMIM12-202ENST00000423898 ARHGEF5Q12774 1597 aa33.31■■■□□ 2.92
SMIM12-202ENST00000423898 ZMYM3Q14202 1370 aa33.31■■■□□ 2.92
SMIM12-202ENST00000423898 RSPH4AQ5TD94 716 aa33.3■■■□□ 2.92
SMIM12-202ENST00000423898 STRCQ7RTU9 1775 aa33.29■■■□□ 2.92
SMIM12-202ENST00000423898 DHX29Q7Z478 1369 aaKnown RBP33.28■■■□□ 2.92
SMIM12-202ENST00000423898 NPATQ14207 1427 aa33.27■■■□□ 2.92
SMIM12-202ENST00000423898 MYOM3Q5VTT5 1437 aa33.23■■■□□ 2.91
SMIM12-202ENST00000423898 APLP2Q06481 763 aa33.23■■■□□ 2.91
SMIM12-202ENST00000423898 FBXO41Q8TF61 875 aa33.23■■■□□ 2.91
SMIM12-202ENST00000423898 TSPY4P0CV99 314 aa33.22■■■□□ 2.91
SMIM12-202ENST00000423898 TSPY10P0CW01 314 aa33.22■■■□□ 2.91
SMIM12-202ENST00000423898 PPP6R1Q9UPN7 881 aa33.2■■■□□ 2.91
SMIM12-202ENST00000423898 KIF3BO15066 747 aa33.19■■■□□ 2.9
SMIM12-202ENST00000423898 MIA2Q96PC5 1412 aa33.19■■■□□ 2.9
SMIM12-202ENST00000423898 MYO3AQ8NEV4 1616 aa33.17■■■□□ 2.9
SMIM12-202ENST00000423898 DMRT2Q9Y5R5 561 aa33.16■■■□□ 2.9
SMIM12-202ENST00000423898 PTPRKQ15262 1439 aa33.16■■■□□ 2.9
SMIM12-202ENST00000423898 MAST1Q9Y2H9 1570 aa33.15■■■□□ 2.9
SMIM12-202ENST00000423898 ZNF142P52746 1687 aaPredicted RBP33.12■■■□□ 2.89
SMIM12-202ENST00000423898 CAMSAP1Q5T5Y3 1602 aa33.11■■■□□ 2.89
SMIM12-202ENST00000423898 KDM5DQ9BY66 1539 aa33.11■■■□□ 2.89
SMIM12-202ENST00000423898 NCOA1Q15788 1441 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms