RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ARHGAP5Q13017 1502 aa24.61■■□□□ 1.53
USB1-202ENST00000423271 ZFYVE16Q7Z3T8 1539 aa24.61■■□□□ 1.53
USB1-202ENST00000423271 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
USB1-202ENST00000423271 EFCAB2Q5VUJ9 269 aa24.6■■□□□ 1.53
USB1-202ENST00000423271 BCORL1Q5H9F3 1711 aa24.6■■□□□ 1.53
USB1-202ENST00000423271 ARID4BQ4LE39 1312 aaPredicted RBP24.58■■□□□ 1.52
USB1-202ENST00000423271 CDC42BPBQ9Y5S2 1711 aa24.58■■□□□ 1.52
USB1-202ENST00000423271 SIGLEC1Q9BZZ2 1709 aa24.56■■□□□ 1.52
USB1-202ENST00000423271 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
USB1-202ENST00000423271 MAGI2Q86UL8 1455 aa24.56■■□□□ 1.52
USB1-202ENST00000423271 HECW2Q9P2P5 1572 aa24.55■■□□□ 1.52
USB1-202ENST00000423271 MADDQ8WXG6 1647 aa24.55■■□□□ 1.52
USB1-202ENST00000423271 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
USB1-202ENST00000423271 PTPRMP28827 1452 aa24.52■■□□□ 1.52
USB1-202ENST00000423271 CDC42BPAQ5VT25 1732 aa24.51■■□□□ 1.51
USB1-202ENST00000423271 ZNF518AQ6AHZ1 1483 aa24.5■■□□□ 1.51
USB1-202ENST00000423271 KDM5CP41229 1560 aa24.49■■□□□ 1.51
USB1-202ENST00000423271 ABCC1P33527 1531 aa24.47■■□□□ 1.51
USB1-202ENST00000423271 RIMS1Q86UR5 1692 aaKnown RBP24.46■■□□□ 1.51
USB1-202ENST00000423271 AFAP1Q8N556 730 aa24.46■■□□□ 1.51
USB1-202ENST00000423271 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.51
USB1-202ENST00000423271 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
USB1-202ENST00000423271 ATP10AO60312 1499 aa24.44■■□□□ 1.5
USB1-202ENST00000423271 C9orf84Q5VXU9 1444 aa24.43■■□□□ 1.5
USB1-202ENST00000423271 TRAPPC8Q9Y2L5 1435 aa24.43■■□□□ 1.5
USB1-202ENST00000423271 GPATCH8Q9UKJ3 1502 aaKnown RBP24.41■■□□□ 1.5
USB1-202ENST00000423271 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
USB1-202ENST00000423271 DIP2CQ9Y2E4 1556 aa24.4■■□□□ 1.5
USB1-202ENST00000423271 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
USB1-202ENST00000423271 MLECQ14165 292 aa24.39■■□□□ 1.49
USB1-202ENST00000423271 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
USB1-202ENST00000423271 ABCA6Q8N139 1617 aa24.38■■□□□ 1.49
USB1-202ENST00000423271 MLH3Q9UHC1 1453 aa24.37■■□□□ 1.49
USB1-202ENST00000423271 FER1L4A9Z1Z3 1794 aa24.36■■□□□ 1.49
USB1-202ENST00000423271 EHBP1L1Q8N3D4 1523 aa24.35■■□□□ 1.49
USB1-202ENST00000423271 MYT1LQ9UL68 1186 aa24.35■■□□□ 1.49
USB1-202ENST00000423271 ZNF777Q9ULD5 760 aaPredicted RBP24.35■■□□□ 1.49
USB1-202ENST00000423271 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
USB1-202ENST00000423271 CCNB3Q8WWL7 1395 aa24.33■■□□□ 1.49
USB1-202ENST00000423271 KIDINS220Q9ULH0 1771 aa24.31■■□□□ 1.48
USB1-202ENST00000423271 TIAM1Q13009 1591 aa24.31■■□□□ 1.48
USB1-202ENST00000423271 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
USB1-202ENST00000423271 PLPPR3Q6T4P5 718 aa24.3■■□□□ 1.48
USB1-202ENST00000423271 CFDP1Q9UEE9 299 aaPredicted RBP24.29■■□□□ 1.48
USB1-202ENST00000423271 LMTK3Q96Q04 1460 aa24.27■■□□□ 1.48
USB1-202ENST00000423271 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
USB1-202ENST00000423271 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
USB1-202ENST00000423271 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
USB1-202ENST00000423271 PLEKHH2Q8IVE3 1493 aa24.25■■□□□ 1.47
USB1-202ENST00000423271 AGLP35573 1532 aa24.23■■□□□ 1.47
USB1-202ENST00000423271 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
USB1-202ENST00000423271 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
USB1-202ENST00000423271 SUPT6HQ7KZ85 1726 aaKnown RBP24.21■■□□□ 1.47
USB1-202ENST00000423271 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.47
USB1-202ENST00000423271 ATP7AQ04656 1500 aa24.2■■□□□ 1.47
USB1-202ENST00000423271 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
USB1-202ENST00000423271 CEBPAP49715 358 aaPredicted RBP24.17■■□□□ 1.46
USB1-202ENST00000423271 MBD5Q9P267 1494 aa24.15■■□□□ 1.46
USB1-202ENST00000423271 HSPA2P54652 639 aa24.14■■□□□ 1.45
USB1-202ENST00000423271 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
USB1-202ENST00000423271 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
USB1-202ENST00000423271 CAMSAP2Q08AD1 1489 aa24.11■■□□□ 1.45
USB1-202ENST00000423271 C3P01024 1663 aa24.1■■□□□ 1.45
USB1-202ENST00000423271 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
USB1-202ENST00000423271 A2MP01023 1474 aa24.09■■□□□ 1.45
USB1-202ENST00000423271 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
USB1-202ENST00000423271 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
USB1-202ENST00000423271 ADGBQ8N7X0 1667 aa24.05■■□□□ 1.44
USB1-202ENST00000423271 ESF1Q9H501 851 aaKnown RBP24.05■■□□□ 1.44
USB1-202ENST00000423271 CCDC141Q6ZP82 1450 aa24.05■■□□□ 1.44
USB1-202ENST00000423271 ILDR1Q86SU0 546 aaPredicted RBP24.04■■□□□ 1.44
USB1-202ENST00000423271 CNTLNQ9NXG0 1405 aa24.03■■□□□ 1.44
USB1-202ENST00000423271 RTEL1-TNFRSF6BF6WH68 1400 aa24.02■■□□□ 1.44
USB1-202ENST00000423271 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
USB1-202ENST00000423271 MROH2AA6NES4 1674 aa24■■□□□ 1.43
USB1-202ENST00000423271 UHRF1BP1Q6BDS2 1440 aa24■■□□□ 1.43
USB1-202ENST00000423271 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
USB1-202ENST00000423271 CLTCQ00610 1675 aaKnown RBP23.99■■□□□ 1.43
USB1-202ENST00000423271 MYOM3Q5VTT5 1437 aa23.95■■□□□ 1.42
USB1-202ENST00000423271 GGT6Q6P531 493 aa23.95■■□□□ 1.42
USB1-202ENST00000423271 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
USB1-202ENST00000423271 ZMYM3Q14202 1370 aa23.93■■□□□ 1.42
USB1-202ENST00000423271 RSPH4AQ5TD94 716 aa23.93■■□□□ 1.42
USB1-202ENST00000423271 MIA2Q96PC5 1412 aa23.91■■□□□ 1.42
USB1-202ENST00000423271 STRCQ7RTU9 1775 aa23.91■■□□□ 1.42
USB1-202ENST00000423271 NPATQ14207 1427 aa23.9■■□□□ 1.42
USB1-202ENST00000423271 MAST1Q9Y2H9 1570 aa23.88■■□□□ 1.41
USB1-202ENST00000423271 APLP2Q06481 763 aa23.87■■□□□ 1.41
USB1-202ENST00000423271 KIF3BO15066 747 aa23.86■■□□□ 1.41
USB1-202ENST00000423271 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
USB1-202ENST00000423271 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
USB1-202ENST00000423271 PTPRKQ15262 1439 aa23.85■■□□□ 1.41
USB1-202ENST00000423271 PPP6R1Q9UPN7 881 aa23.84■■□□□ 1.41
USB1-202ENST00000423271 MYO3AQ8NEV4 1616 aa23.83■■□□□ 1.41
USB1-202ENST00000423271 PTPN23Q9H3S7 1636 aa23.81■■□□□ 1.4
USB1-202ENST00000423271 KDM5DQ9BY66 1539 aa23.8■■□□□ 1.4
USB1-202ENST00000423271 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
USB1-202ENST00000423271 NCOA1Q15788 1441 aa23.78■■□□□ 1.4
USB1-202ENST00000423271 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
USB1-202ENST00000423271 CROCC2H7BZ55 1655 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms