RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 ADGRL1O94910 1474 aa15.28■□□□□ 0.04
HERC3-204ENST00000422770 FRMPD1Q5SYB0 1578 aa15.28■□□□□ 0.04
HERC3-204ENST00000422770 SUPT6HQ7KZ85 1726 aaKnown RBP15.27■□□□□ 0.04
HERC3-204ENST00000422770 RAPGEF3O95398 923 aa15.27■□□□□ 0.04
HERC3-204ENST00000422770 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.03
HERC3-204ENST00000422770 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
HERC3-204ENST00000422770 EFCAB2Q5VUJ9 269 aa15.26■□□□□ 0.03
HERC3-204ENST00000422770 APLP2Q06481 763 aa15.24■□□□□ 0.03
HERC3-204ENST00000422770 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
HERC3-204ENST00000422770 ZNF777Q9ULD5 760 aaPredicted RBP15.23■□□□□ 0.03
HERC3-204ENST00000422770 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
HERC3-204ENST00000422770 MYT1LQ9UL68 1186 aa15.21■□□□□ 0.03
HERC3-204ENST00000422770 ARHGEF40Q8TER5 1519 aa15.2■□□□□ 0.02
HERC3-204ENST00000422770 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
HERC3-204ENST00000422770 ABCC1P33527 1531 aa15.19■□□□□ 0.02
HERC3-204ENST00000422770 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
HERC3-204ENST00000422770 ZFYVE16Q7Z3T8 1539 aa15.18■□□□□ 0.02
HERC3-204ENST00000422770 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
HERC3-204ENST00000422770 NCOA2Q15596 1464 aa15.18■□□□□ 0.02
HERC3-204ENST00000422770 LRRC9Q6ZRR7 1453 aa15.18■□□□□ 0.02
HERC3-204ENST00000422770 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
HERC3-204ENST00000422770 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
HERC3-204ENST00000422770 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
HERC3-204ENST00000422770 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
HERC3-204ENST00000422770 ZNF518AQ6AHZ1 1483 aa15.16■□□□□ 0.02
HERC3-204ENST00000422770 ARID4BQ4LE39 1312 aaPredicted RBP15.16■□□□□ 0.02
HERC3-204ENST00000422770 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
HERC3-204ENST00000422770 MAP3K1Q13233 1512 aa15.15■□□□□ 0.02
HERC3-204ENST00000422770 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
HERC3-204ENST00000422770 KDM5CP41229 1560 aa15.12■□□□□ 0.01
HERC3-204ENST00000422770 YEATS2Q9ULM3 1422 aa15.12■□□□□ 0.01
HERC3-204ENST00000422770 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
HERC3-204ENST00000422770 TRAPPC8Q9Y2L5 1435 aa15.11■□□□□ 0.01
HERC3-204ENST00000422770 AFAP1Q8N556 730 aa15.11■□□□□ 0.01
HERC3-204ENST00000422770 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
HERC3-204ENST00000422770 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
HERC3-204ENST00000422770 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
HERC3-204ENST00000422770 ABCA6Q8N139 1617 aa15.09■□□□□ 0.01
HERC3-204ENST00000422770 BCORL1Q5H9F3 1711 aa15.09■□□□□ 0.01
HERC3-204ENST00000422770 SIGLEC1Q9BZZ2 1709 aa15.09■□□□□ 0.01
HERC3-204ENST00000422770 CAMSAP2Q08AD1 1489 aa15.08■□□□□ 0.01
HERC3-204ENST00000422770 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
HERC3-204ENST00000422770 KIDINS220Q9ULH0 1771 aa15.08■□□□□ 0
HERC3-204ENST00000422770 DIP2CQ9Y2E4 1556 aa15.07■□□□□ 0
HERC3-204ENST00000422770 C9orf84Q5VXU9 1444 aa15.06■□□□□ 0
HERC3-204ENST00000422770 ATP10AO60312 1499 aa15.05■□□□□ -0
HERC3-204ENST00000422770 ATP7AQ04656 1500 aa15.05■□□□□ -0
HERC3-204ENST00000422770 RIMS1Q86UR5 1692 aaKnown RBP15.05■□□□□ -0
HERC3-204ENST00000422770 FER1L4A9Z1Z3 1794 aa15.04■□□□□ -0
HERC3-204ENST00000422770 MADDQ8WXG6 1647 aa15.04■□□□□ -0
HERC3-204ENST00000422770 MYOM3Q5VTT5 1437 aa15.04■□□□□ -0
HERC3-204ENST00000422770 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
HERC3-204ENST00000422770 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
HERC3-204ENST00000422770 MLECQ14165 292 aa15.04■□□□□ -0
HERC3-204ENST00000422770 ADAMTSL3P82987 1691 aa15.03■□□□□ -0
HERC3-204ENST00000422770 INO80Q9ULG1 1556 aaPredicted RBP15.03■□□□□ -0
HERC3-204ENST00000422770 MLH3Q9UHC1 1453 aa15.03■□□□□ -0
HERC3-204ENST00000422770 PTPN23Q9H3S7 1636 aa15.02□□□□□ -0.01
HERC3-204ENST00000422770 ADGBQ8N7X0 1667 aa15.01□□□□□ -0.01
HERC3-204ENST00000422770 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
HERC3-204ENST00000422770 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
HERC3-204ENST00000422770 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
HERC3-204ENST00000422770 ARHGEF5Q12774 1597 aa14.98□□□□□ -0.01
HERC3-204ENST00000422770 MBD5Q9P267 1494 aa14.98□□□□□ -0.01
HERC3-204ENST00000422770 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
HERC3-204ENST00000422770 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
HERC3-204ENST00000422770 CROCC2H7BZ55 1655 aa14.97□□□□□ -0.01
HERC3-204ENST00000422770 FGD6Q6ZV73 1430 aa14.95□□□□□ -0.02
HERC3-204ENST00000422770 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
HERC3-204ENST00000422770 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
HERC3-204ENST00000422770 PTPRMP28827 1452 aa14.94□□□□□ -0.02
HERC3-204ENST00000422770 FAM50AQ14320 339 aaKnown RBP14.93□□□□□ -0.02
HERC3-204ENST00000422770 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
HERC3-204ENST00000422770 A2MP01023 1474 aa14.93□□□□□ -0.02
HERC3-204ENST00000422770 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
HERC3-204ENST00000422770 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
HERC3-204ENST00000422770 RTEL1-TNFRSF6BF6WH68 1400 aa14.92□□□□□ -0.02
HERC3-204ENST00000422770 AGLP35573 1532 aa14.91□□□□□ -0.02
HERC3-204ENST00000422770 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
HERC3-204ENST00000422770 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
HERC3-204ENST00000422770 CLTCQ00610 1675 aaKnown RBP14.89□□□□□ -0.03
HERC3-204ENST00000422770 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
HERC3-204ENST00000422770 DAPK1P53355 1430 aa14.87□□□□□ -0.03
HERC3-204ENST00000422770 C3P01024 1663 aa14.87□□□□□ -0.03
HERC3-204ENST00000422770 GGT6Q6P531 493 aa14.86□□□□□ -0.03
HERC3-204ENST00000422770 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
HERC3-204ENST00000422770 CHIC2Q9UKJ5 165 aa14.85□□□□□ -0.03
HERC3-204ENST00000422770 ABCC5O15440 1437 aa14.84□□□□□ -0.03
HERC3-204ENST00000422770 KIF3BO15066 747 aa14.84□□□□□ -0.03
HERC3-204ENST00000422770 DHX29Q7Z478 1369 aaKnown RBP14.84□□□□□ -0.03
HERC3-204ENST00000422770 MROH2AA6NES4 1674 aa14.84□□□□□ -0.03
HERC3-204ENST00000422770 EIF2AK4Q9P2K8 1649 aaKnown RBP14.82□□□□□ -0.04
HERC3-204ENST00000422770 ITGAEP38570 1179 aa14.82□□□□□ -0.04
HERC3-204ENST00000422770 CEBPAP49715 358 aaPredicted RBP14.82□□□□□ -0.04
HERC3-204ENST00000422770 PREX1Q8TCU6 1659 aa14.81□□□□□ -0.04
HERC3-204ENST00000422770 RRP7BPQ9NSQ0 103 aa14.81□□□□□ -0.04
HERC3-204ENST00000422770 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
HERC3-204ENST00000422770 CNTLNQ9NXG0 1405 aa14.81□□□□□ -0.04
HERC3-204ENST00000422770 DUOX2Q9NRD8 1548 aa14.81□□□□□ -0.04
HERC3-204ENST00000422770 CEP152O94986 1710 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms