RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
MDC1-204ENST00000422266 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
MDC1-204ENST00000422266 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
MDC1-204ENST00000422266 ARHGEF40Q8TER5 1519 aa13.8□□□□□ -0.2
MDC1-204ENST00000422266 MTUS2Q5JR59 1369 aa13.78□□□□□ -0.2
MDC1-204ENST00000422266 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
MDC1-204ENST00000422266 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
MDC1-204ENST00000422266 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
MDC1-204ENST00000422266 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
MDC1-204ENST00000422266 ATP10AO60312 1499 aa13.74□□□□□ -0.21
MDC1-204ENST00000422266 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
MDC1-204ENST00000422266 PLEKHH2Q8IVE3 1493 aa13.73□□□□□ -0.21
MDC1-204ENST00000422266 BCORL1Q5H9F3 1711 aa13.73□□□□□ -0.21
MDC1-204ENST00000422266 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
MDC1-204ENST00000422266 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
MDC1-204ENST00000422266 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
MDC1-204ENST00000422266 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
MDC1-204ENST00000422266 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
MDC1-204ENST00000422266 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
MDC1-204ENST00000422266 KDM5CP41229 1560 aa13.71□□□□□ -0.21
MDC1-204ENST00000422266 PTPRMP28827 1452 aa13.71□□□□□ -0.21
MDC1-204ENST00000422266 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.21
MDC1-204ENST00000422266 EHBP1L1Q8N3D4 1523 aa13.7□□□□□ -0.22
MDC1-204ENST00000422266 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
MDC1-204ENST00000422266 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
MDC1-204ENST00000422266 ABCC1P33527 1531 aa13.69□□□□□ -0.22
MDC1-204ENST00000422266 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
MDC1-204ENST00000422266 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
MDC1-204ENST00000422266 CDC42BPAQ5VT25 1732 aa13.68□□□□□ -0.22
MDC1-204ENST00000422266 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
MDC1-204ENST00000422266 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
MDC1-204ENST00000422266 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
MDC1-204ENST00000422266 TRAPPC8Q9Y2L5 1435 aa13.65□□□□□ -0.22
MDC1-204ENST00000422266 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
MDC1-204ENST00000422266 RSPH4AQ5TD94 716 aa13.65□□□□□ -0.22
MDC1-204ENST00000422266 ITSN2Q9NZM3 1697 aa13.65□□□□□ -0.22
MDC1-204ENST00000422266 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
MDC1-204ENST00000422266 APLP2Q06481 763 aa13.64□□□□□ -0.23
MDC1-204ENST00000422266 MLECQ14165 292 aa13.64□□□□□ -0.23
MDC1-204ENST00000422266 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
MDC1-204ENST00000422266 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
MDC1-204ENST00000422266 ARHGEF12Q9NZN5 1544 aa13.63□□□□□ -0.23
MDC1-204ENST00000422266 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
MDC1-204ENST00000422266 HNRNPMP52272 730 aaKnown RBP eCLIP13.62□□□□□ -0.23
MDC1-204ENST00000422266 AGLP35573 1532 aa13.62□□□□□ -0.23
MDC1-204ENST00000422266 SYCP2Q9BX26 1530 aa13.62□□□□□ -0.23
MDC1-204ENST00000422266 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
MDC1-204ENST00000422266 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
MDC1-204ENST00000422266 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
MDC1-204ENST00000422266 RIMS1Q86UR5 1692 aaKnown RBP13.6□□□□□ -0.23
MDC1-204ENST00000422266 FER1L4A9Z1Z3 1794 aa13.59□□□□□ -0.23
MDC1-204ENST00000422266 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
MDC1-204ENST00000422266 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
MDC1-204ENST00000422266 CNTLNQ9NXG0 1405 aa13.58□□□□□ -0.24
MDC1-204ENST00000422266 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
MDC1-204ENST00000422266 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
MDC1-204ENST00000422266 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
MDC1-204ENST00000422266 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
MDC1-204ENST00000422266 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
MDC1-204ENST00000422266 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
MDC1-204ENST00000422266 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
MDC1-204ENST00000422266 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
MDC1-204ENST00000422266 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
MDC1-204ENST00000422266 A2MP01023 1474 aa13.54□□□□□ -0.24
MDC1-204ENST00000422266 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
MDC1-204ENST00000422266 INO80Q9ULG1 1556 aaPredicted RBP13.54□□□□□ -0.24
MDC1-204ENST00000422266 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
MDC1-204ENST00000422266 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
MDC1-204ENST00000422266 MIA2Q96PC5 1412 aa13.53□□□□□ -0.24
MDC1-204ENST00000422266 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
MDC1-204ENST00000422266 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.24
MDC1-204ENST00000422266 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
MDC1-204ENST00000422266 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
MDC1-204ENST00000422266 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
MDC1-204ENST00000422266 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
MDC1-204ENST00000422266 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
MDC1-204ENST00000422266 MYOM3Q5VTT5 1437 aa13.49□□□□□ -0.25
MDC1-204ENST00000422266 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
MDC1-204ENST00000422266 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
MDC1-204ENST00000422266 CEBPAP49715 358 aaPredicted RBP13.48□□□□□ -0.25
MDC1-204ENST00000422266 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
MDC1-204ENST00000422266 NPATQ14207 1427 aa13.47□□□□□ -0.25
MDC1-204ENST00000422266 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
MDC1-204ENST00000422266 GGT6Q6P531 493 aa13.47□□□□□ -0.25
MDC1-204ENST00000422266 ZMYM3Q14202 1370 aa13.46□□□□□ -0.25
MDC1-204ENST00000422266 MROH2AA6NES4 1674 aa13.46□□□□□ -0.26
MDC1-204ENST00000422266 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
MDC1-204ENST00000422266 KIF3BO15066 747 aa13.44□□□□□ -0.26
MDC1-204ENST00000422266 HSPA2P54652 639 aa13.44□□□□□ -0.26
MDC1-204ENST00000422266 C3P01024 1663 aa13.44□□□□□ -0.26
MDC1-204ENST00000422266 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
MDC1-204ENST00000422266 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
MDC1-204ENST00000422266 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
MDC1-204ENST00000422266 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
MDC1-204ENST00000422266 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
MDC1-204ENST00000422266 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
MDC1-204ENST00000422266 PTPN23Q9H3S7 1636 aa13.36□□□□□ -0.27
MDC1-204ENST00000422266 DUOX2Q9NRD8 1548 aa13.36□□□□□ -0.27
MDC1-204ENST00000422266 PTPRKQ15262 1439 aa13.36□□□□□ -0.27
MDC1-204ENST00000422266 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms