RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 MS4A1P11836 297 aa17.25■□□□□ 0.35
COL20A1-203ENST00000422202 ARID3AQ99856 593 aa17.25■□□□□ 0.35
COL20A1-203ENST00000422202 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
COL20A1-203ENST00000422202 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL20A1-203ENST00000422202 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
COL20A1-203ENST00000422202 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
COL20A1-203ENST00000422202 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
COL20A1-203ENST00000422202 GORABQ5T7V8 394 aa17.21■□□□□ 0.35
COL20A1-203ENST00000422202 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
COL20A1-203ENST00000422202 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
COL20A1-203ENST00000422202 CEP89Q96ST8 783 aa17.19■□□□□ 0.34
COL20A1-203ENST00000422202 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
COL20A1-203ENST00000422202 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
COL20A1-203ENST00000422202 RSF1Q96T23 1441 aaPredicted RBP17.17■□□□□ 0.34
COL20A1-203ENST00000422202 TPM4P67936 248 aa17.16■□□□□ 0.34
COL20A1-203ENST00000422202 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
COL20A1-203ENST00000422202 GOLGA6L1Q8N7Z2 621 aa17.15■□□□□ 0.34
COL20A1-203ENST00000422202 STK26Q9P289 416 aa17.15■□□□□ 0.34
COL20A1-203ENST00000422202 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
COL20A1-203ENST00000422202 MARCH6O60337 910 aa17.13■□□□□ 0.33
COL20A1-203ENST00000422202 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
COL20A1-203ENST00000422202 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
COL20A1-203ENST00000422202 MSH5O43196 834 aa17.12■□□□□ 0.33
COL20A1-203ENST00000422202 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
COL20A1-203ENST00000422202 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
COL20A1-203ENST00000422202 B4GALNT3Q6L9W6 998 aa17.11■□□□□ 0.33
COL20A1-203ENST00000422202 KANK1Q14678 1352 aa17.11■□□□□ 0.33
COL20A1-203ENST00000422202 TNNT3P45378 269 aaPredicted RBP17.1■□□□□ 0.33
COL20A1-203ENST00000422202 GPATCH3Q96I76 525 aa17.1■□□□□ 0.33
COL20A1-203ENST00000422202 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.33
COL20A1-203ENST00000422202 MORC1Q86VD1 984 aa17.08■□□□□ 0.33
COL20A1-203ENST00000422202 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
COL20A1-203ENST00000422202 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
COL20A1-203ENST00000422202 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
COL20A1-203ENST00000422202 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
COL20A1-203ENST00000422202 TCEAL9Q9UHQ7 104 aa17.06■□□□□ 0.32
COL20A1-203ENST00000422202 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
COL20A1-203ENST00000422202 CCDC34Q96HJ3 373 aa17.06■□□□□ 0.32
COL20A1-203ENST00000422202 TMF1P82094 1093 aa17.05■□□□□ 0.32
COL20A1-203ENST00000422202 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
COL20A1-203ENST00000422202 RAD21O60216 631 aa17.02■□□□□ 0.32
COL20A1-203ENST00000422202 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.32
COL20A1-203ENST00000422202 HDGFL2Q7Z4V5 671 aaPredicted RBP17.01■□□□□ 0.31
COL20A1-203ENST00000422202 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
COL20A1-203ENST00000422202 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
COL20A1-203ENST00000422202 TPD52L1Q16890 204 aaPredicted RBP17.01■□□□□ 0.31
COL20A1-203ENST00000422202 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
COL20A1-203ENST00000422202 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
COL20A1-203ENST00000422202 EIF4G1Q04637 1599 aaKnown RBP17■□□□□ 0.31
COL20A1-203ENST00000422202 CTDP1Q9Y5B0 961 aaPredicted RBP16.99■□□□□ 0.31
COL20A1-203ENST00000422202 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
COL20A1-203ENST00000422202 CLIP1P30622 1438 aa16.99■□□□□ 0.31
COL20A1-203ENST00000422202 TRIM34Q9BYJ4 488 aa16.99■□□□□ 0.31
COL20A1-203ENST00000422202 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
COL20A1-203ENST00000422202 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
COL20A1-203ENST00000422202 TPM3P06753 285 aa16.98■□□□□ 0.31
COL20A1-203ENST00000422202 NOL8Q76FK4 1167 aaKnown RBP16.98■□□□□ 0.31
COL20A1-203ENST00000422202 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
COL20A1-203ENST00000422202 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
COL20A1-203ENST00000422202 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
COL20A1-203ENST00000422202 PTMSP20962 102 aa16.95■□□□□ 0.3
COL20A1-203ENST00000422202 GGT6Q6P531 493 aa16.95■□□□□ 0.3
COL20A1-203ENST00000422202 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
COL20A1-203ENST00000422202 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
COL20A1-203ENST00000422202 CSPP1Q1MSJ5 1256 aa16.93■□□□□ 0.3
COL20A1-203ENST00000422202 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
COL20A1-203ENST00000422202 SETQ01105 290 aaPredicted RBP16.92■□□□□ 0.3
COL20A1-203ENST00000422202 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
COL20A1-203ENST00000422202 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
COL20A1-203ENST00000422202 RB1CC1Q8TDY2 1594 aa16.91■□□□□ 0.3
COL20A1-203ENST00000422202 EVA1CP58658 441 aa16.91■□□□□ 0.3
COL20A1-203ENST00000422202 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
COL20A1-203ENST00000422202 TPM2P07951 284 aa16.9■□□□□ 0.3
COL20A1-203ENST00000422202 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
COL20A1-203ENST00000422202 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
COL20A1-203ENST00000422202 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL20A1-203ENST00000422202 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
COL20A1-203ENST00000422202 FOXD4L5Q5VV16 416 aaPredicted RBP16.89■□□□□ 0.29
COL20A1-203ENST00000422202 FOXD4L4Q8WXT5 416 aaPredicted RBP16.89■□□□□ 0.29
COL20A1-203ENST00000422202 SLKQ9H2G2 1235 aaPredicted RBP16.89■□□□□ 0.29
COL20A1-203ENST00000422202 AKAP17AQ02040 695 aaKnown RBP16.88■□□□□ 0.29
COL20A1-203ENST00000422202 H3BQV1 296 aa16.88■□□□□ 0.29
COL20A1-203ENST00000422202 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
COL20A1-203ENST00000422202 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
COL20A1-203ENST00000422202 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
COL20A1-203ENST00000422202 KAT6BQ8WYB5 2073 aa16.87■□□□□ 0.29
COL20A1-203ENST00000422202 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
COL20A1-203ENST00000422202 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.86■□□□□ 0.29
COL20A1-203ENST00000422202 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
COL20A1-203ENST00000422202 PCMTD1Q96MG8 357 aaPredicted RBP16.85■□□□□ 0.29
COL20A1-203ENST00000422202 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
COL20A1-203ENST00000422202 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
COL20A1-203ENST00000422202 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
COL20A1-203ENST00000422202 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
COL20A1-203ENST00000422202 AMPHP49418 695 aa16.84■□□□□ 0.29
COL20A1-203ENST00000422202 PHF14O94880 888 aa16.83■□□□□ 0.28
COL20A1-203ENST00000422202 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.28
COL20A1-203ENST00000422202 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
COL20A1-203ENST00000422202 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
COL20A1-203ENST00000422202 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms