RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 KIF14Q15058 1648 aa15.94■□□□□ 0.14
NF1-203ENST00000422121 NEO1Q92859 1461 aa15.94■□□□□ 0.14
NF1-203ENST00000422121 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
NF1-203ENST00000422121 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
NF1-203ENST00000422121 PLCH2O75038 1416 aa15.93■□□□□ 0.14
NF1-203ENST00000422121 CCDC18Q5T9S5 1454 aa15.92■□□□□ 0.14
NF1-203ENST00000422121 KDM4FA0A1W2PPD8 638 aa15.91■□□□□ 0.14
NF1-203ENST00000422121 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
NF1-203ENST00000422121 FANCAO15360 1455 aa15.9■□□□□ 0.14
NF1-203ENST00000422121 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
NF1-203ENST00000422121 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
NF1-203ENST00000422121 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
NF1-203ENST00000422121 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
NF1-203ENST00000422121 DENND4BO75064 1496 aaPredicted RBP15.83■□□□□ 0.12
NF1-203ENST00000422121 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
NF1-203ENST00000422121 SCAPERQ9BY12 1400 aa15.82■□□□□ 0.12
NF1-203ENST00000422121 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
NF1-203ENST00000422121 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
NF1-203ENST00000422121 CDC42BPBQ9Y5S2 1711 aa15.81■□□□□ 0.12
NF1-203ENST00000422121 GPATCH8Q9UKJ3 1502 aaKnown RBP15.8■□□□□ 0.12
NF1-203ENST00000422121 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
NF1-203ENST00000422121 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
NF1-203ENST00000422121 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
NF1-203ENST00000422121 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
NF1-203ENST00000422121 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.12
NF1-203ENST00000422121 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
NF1-203ENST00000422121 PREX2Q70Z35 1606 aa15.77■□□□□ 0.12
NF1-203ENST00000422121 AFAP1Q8N556 730 aa15.77■□□□□ 0.12
NF1-203ENST00000422121 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.11
NF1-203ENST00000422121 YEATS2Q9ULM3 1422 aa15.76■□□□□ 0.11
NF1-203ENST00000422121 ZMYM4Q5VZL5 1548 aa15.75■□□□□ 0.11
NF1-203ENST00000422121 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
NF1-203ENST00000422121 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
NF1-203ENST00000422121 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
NF1-203ENST00000422121 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
NF1-203ENST00000422121 ABCC1P33527 1531 aa15.71■□□□□ 0.11
NF1-203ENST00000422121 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
NF1-203ENST00000422121 SIGLEC1Q9BZZ2 1709 aa15.71■□□□□ 0.1
NF1-203ENST00000422121 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
NF1-203ENST00000422121 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.1
NF1-203ENST00000422121 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
NF1-203ENST00000422121 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
NF1-203ENST00000422121 MAP3K1Q13233 1512 aa15.7■□□□□ 0.1
NF1-203ENST00000422121 ZNF777Q9ULD5 760 aaPredicted RBP15.7■□□□□ 0.1
NF1-203ENST00000422121 KDM5CP41229 1560 aa15.7■□□□□ 0.1
NF1-203ENST00000422121 ARHGEF40Q8TER5 1519 aa15.69■□□□□ 0.1
NF1-203ENST00000422121 CFDP1Q9UEE9 299 aaPredicted RBP15.69■□□□□ 0.1
NF1-203ENST00000422121 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
NF1-203ENST00000422121 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
NF1-203ENST00000422121 HNRNPMP52272 730 aaKnown RBP eCLIP15.68■□□□□ 0.1
NF1-203ENST00000422121 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
NF1-203ENST00000422121 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
NF1-203ENST00000422121 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
NF1-203ENST00000422121 KIAA1107Q9UPP5 1409 aa15.66■□□□□ 0.1
NF1-203ENST00000422121 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
NF1-203ENST00000422121 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
NF1-203ENST00000422121 ATP10AO60312 1499 aa15.65■□□□□ 0.1
NF1-203ENST00000422121 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
NF1-203ENST00000422121 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
NF1-203ENST00000422121 SYCP2Q9BX26 1530 aa15.63■□□□□ 0.09
NF1-203ENST00000422121 ARID4BQ4LE39 1312 aaPredicted RBP15.63■□□□□ 0.09
NF1-203ENST00000422121 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
NF1-203ENST00000422121 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
NF1-203ENST00000422121 KIDINS220Q9ULH0 1771 aa15.61■□□□□ 0.09
NF1-203ENST00000422121 HECW2Q9P2P5 1572 aa15.61■□□□□ 0.09
NF1-203ENST00000422121 DIP2CQ9Y2E4 1556 aa15.61■□□□□ 0.09
NF1-203ENST00000422121 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
NF1-203ENST00000422121 PLEKHH2Q8IVE3 1493 aa15.59■□□□□ 0.09
NF1-203ENST00000422121 ABCA6Q8N139 1617 aa15.59■□□□□ 0.09
NF1-203ENST00000422121 SPAG9O60271 1321 aaKnown RBP15.58■□□□□ 0.08
NF1-203ENST00000422121 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
NF1-203ENST00000422121 MLECQ14165 292 aa15.56■□□□□ 0.08
NF1-203ENST00000422121 MYT1LQ9UL68 1186 aa15.56■□□□□ 0.08
NF1-203ENST00000422121 PTPRMP28827 1452 aa15.56■□□□□ 0.08
NF1-203ENST00000422121 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
NF1-203ENST00000422121 REREQ9P2R6 1566 aa15.56■□□□□ 0.08
NF1-203ENST00000422121 MYOM3Q5VTT5 1437 aa15.54■□□□□ 0.08
NF1-203ENST00000422121 APLP2Q06481 763 aa15.54■□□□□ 0.08
NF1-203ENST00000422121 INO80Q9ULG1 1556 aaPredicted RBP15.53■□□□□ 0.08
NF1-203ENST00000422121 ATP7AQ04656 1500 aa15.53■□□□□ 0.08
NF1-203ENST00000422121 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
NF1-203ENST00000422121 AGLP35573 1532 aa15.52■□□□□ 0.07
NF1-203ENST00000422121 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
NF1-203ENST00000422121 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
NF1-203ENST00000422121 RSPH4AQ5TD94 716 aa15.5■□□□□ 0.07
NF1-203ENST00000422121 ARHGEF5Q12774 1597 aa15.49■□□□□ 0.07
NF1-203ENST00000422121 RIMS1Q86UR5 1692 aaKnown RBP15.49■□□□□ 0.07
NF1-203ENST00000422121 CCDC141Q6ZP82 1450 aa15.49■□□□□ 0.07
NF1-203ENST00000422121 PLXNC1O60486 1568 aa15.48■□□□□ 0.07
NF1-203ENST00000422121 A2MP01023 1474 aa15.47■□□□□ 0.07
NF1-203ENST00000422121 CEBPAP49715 358 aaPredicted RBP15.46■□□□□ 0.07
NF1-203ENST00000422121 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
NF1-203ENST00000422121 DHX29Q7Z478 1369 aaKnown RBP15.45■□□□□ 0.06
NF1-203ENST00000422121 TCOF1Q13428 1488 aaKnown RBP15.44■□□□□ 0.06
NF1-203ENST00000422121 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
NF1-203ENST00000422121 ABCC5O15440 1437 aa15.43■□□□□ 0.06
NF1-203ENST00000422121 TSPY4P0CV99 314 aa15.43■□□□□ 0.06
NF1-203ENST00000422121 TSPY10P0CW01 314 aa15.43■□□□□ 0.06
NF1-203ENST00000422121 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
NF1-203ENST00000422121 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms