RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
NDUFA3-208ENST00000422029 ARHGEF40Q8TER5 1519 aa18.51■□□□□ 0.55
NDUFA3-208ENST00000422029 SIGLEC1Q9BZZ2 1709 aa18.51■□□□□ 0.55
NDUFA3-208ENST00000422029 AFAP1Q8N556 730 aa18.5■□□□□ 0.55
NDUFA3-208ENST00000422029 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
NDUFA3-208ENST00000422029 ZFYVE16Q7Z3T8 1539 aa18.49■□□□□ 0.55
NDUFA3-208ENST00000422029 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
NDUFA3-208ENST00000422029 HSPA2P54652 639 aa18.47■□□□□ 0.55
NDUFA3-208ENST00000422029 POGZQ7Z3K3 1410 aa18.47■□□□□ 0.55
NDUFA3-208ENST00000422029 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
NDUFA3-208ENST00000422029 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
NDUFA3-208ENST00000422029 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
NDUFA3-208ENST00000422029 CLIP1P30622 1438 aa18.45■□□□□ 0.54
NDUFA3-208ENST00000422029 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
NDUFA3-208ENST00000422029 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
NDUFA3-208ENST00000422029 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
NDUFA3-208ENST00000422029 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
NDUFA3-208ENST00000422029 ATP10AO60312 1499 aa18.39■□□□□ 0.54
NDUFA3-208ENST00000422029 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
NDUFA3-208ENST00000422029 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
NDUFA3-208ENST00000422029 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
NDUFA3-208ENST00000422029 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
NDUFA3-208ENST00000422029 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
NDUFA3-208ENST00000422029 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
NDUFA3-208ENST00000422029 CCDC18Q5T9S5 1454 aa18.34■□□□□ 0.53
NDUFA3-208ENST00000422029 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
NDUFA3-208ENST00000422029 FER1L4A9Z1Z3 1794 aa18.33■□□□□ 0.53
NDUFA3-208ENST00000422029 HNRNPMP52272 730 aaKnown RBP eCLIP18.32■□□□□ 0.52
NDUFA3-208ENST00000422029 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
NDUFA3-208ENST00000422029 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
NDUFA3-208ENST00000422029 DIP2CQ9Y2E4 1556 aa18.29■□□□□ 0.52
NDUFA3-208ENST00000422029 CDC42BPAQ5VT25 1732 aa18.29■□□□□ 0.52
NDUFA3-208ENST00000422029 KDM5CP41229 1560 aa18.28■□□□□ 0.52
NDUFA3-208ENST00000422029 ABCC1P33527 1531 aa18.28■□□□□ 0.52
NDUFA3-208ENST00000422029 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
NDUFA3-208ENST00000422029 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
NDUFA3-208ENST00000422029 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
NDUFA3-208ENST00000422029 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
NDUFA3-208ENST00000422029 GPATCH8Q9UKJ3 1502 aaKnown RBP18.26■□□□□ 0.51
NDUFA3-208ENST00000422029 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
NDUFA3-208ENST00000422029 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
NDUFA3-208ENST00000422029 MTUS2Q5JR59 1369 aa18.24■□□□□ 0.51
NDUFA3-208ENST00000422029 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
NDUFA3-208ENST00000422029 SAMD9LQ8IVG5 1584 aa18.23■□□□□ 0.51
NDUFA3-208ENST00000422029 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
NDUFA3-208ENST00000422029 FBXO41Q8TF61 875 aa18.23■□□□□ 0.51
NDUFA3-208ENST00000422029 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
NDUFA3-208ENST00000422029 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
NDUFA3-208ENST00000422029 KIDINS220Q9ULH0 1771 aa18.21■□□□□ 0.51
NDUFA3-208ENST00000422029 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
NDUFA3-208ENST00000422029 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
NDUFA3-208ENST00000422029 GGT6Q6P531 493 aa18.14■□□□□ 0.49
NDUFA3-208ENST00000422029 C3P01024 1663 aa18.14■□□□□ 0.49
NDUFA3-208ENST00000422029 PREX1Q8TCU6 1659 aa18.14■□□□□ 0.49
NDUFA3-208ENST00000422029 REREQ9P2R6 1566 aa18.13■□□□□ 0.49
NDUFA3-208ENST00000422029 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
NDUFA3-208ENST00000422029 AGLP35573 1532 aa18.13■□□□□ 0.49
NDUFA3-208ENST00000422029 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
NDUFA3-208ENST00000422029 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
NDUFA3-208ENST00000422029 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
NDUFA3-208ENST00000422029 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
NDUFA3-208ENST00000422029 ZMYM3Q14202 1370 aa18.08■□□□□ 0.49
NDUFA3-208ENST00000422029 A2MP01023 1474 aa18.07■□□□□ 0.48
NDUFA3-208ENST00000422029 PLEKHH2Q8IVE3 1493 aa18.07■□□□□ 0.48
NDUFA3-208ENST00000422029 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
NDUFA3-208ENST00000422029 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
NDUFA3-208ENST00000422029 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
NDUFA3-208ENST00000422029 CLTCQ00610 1675 aaKnown RBP18.04■□□□□ 0.48
NDUFA3-208ENST00000422029 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
NDUFA3-208ENST00000422029 MBD5Q9P267 1494 aa18.04■□□□□ 0.48
NDUFA3-208ENST00000422029 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
NDUFA3-208ENST00000422029 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
NDUFA3-208ENST00000422029 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
NDUFA3-208ENST00000422029 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
NDUFA3-208ENST00000422029 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
NDUFA3-208ENST00000422029 KIF3BO15066 747 aa18.01■□□□□ 0.47
NDUFA3-208ENST00000422029 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
NDUFA3-208ENST00000422029 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
NDUFA3-208ENST00000422029 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
NDUFA3-208ENST00000422029 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
NDUFA3-208ENST00000422029 CAMSAP1Q5T5Y3 1602 aa17.96■□□□□ 0.47
NDUFA3-208ENST00000422029 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
NDUFA3-208ENST00000422029 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
NDUFA3-208ENST00000422029 DHX29Q7Z478 1369 aaKnown RBP17.95■□□□□ 0.46
NDUFA3-208ENST00000422029 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
NDUFA3-208ENST00000422029 NPATQ14207 1427 aa17.94■□□□□ 0.46
NDUFA3-208ENST00000422029 NCOA1Q15788 1441 aa17.94■□□□□ 0.46
NDUFA3-208ENST00000422029 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
NDUFA3-208ENST00000422029 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
NDUFA3-208ENST00000422029 RTEL1-TNFRSF6BF6WH68 1400 aa17.92■□□□□ 0.46
NDUFA3-208ENST00000422029 PTPRTO14522 1441 aa17.92■□□□□ 0.46
NDUFA3-208ENST00000422029 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
NDUFA3-208ENST00000422029 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
NDUFA3-208ENST00000422029 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
NDUFA3-208ENST00000422029 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
NDUFA3-208ENST00000422029 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
NDUFA3-208ENST00000422029 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
NDUFA3-208ENST00000422029 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
NDUFA3-208ENST00000422029 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
NDUFA3-208ENST00000422029 LTBP4Q8N2S1 1624 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms