RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
CAST-208ENST00000421689 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
CAST-208ENST00000421689 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
CAST-208ENST00000421689 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
CAST-208ENST00000421689 PHLDB1Q86UU1 1377 aa18.2■□□□□ 0.5
CAST-208ENST00000421689 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
CAST-208ENST00000421689 MYOM3Q5VTT5 1437 aa18.2■□□□□ 0.5
CAST-208ENST00000421689 FANCAO15360 1455 aa18.2■□□□□ 0.5
CAST-208ENST00000421689 NEO1Q92859 1461 aa18.18■□□□□ 0.5
CAST-208ENST00000421689 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
CAST-208ENST00000421689 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
CAST-208ENST00000421689 AKNAQ7Z591 1439 aa18.15■□□□□ 0.5
CAST-208ENST00000421689 FGD6Q6ZV73 1430 aa18.13■□□□□ 0.49
CAST-208ENST00000421689 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
CAST-208ENST00000421689 ADGRL1O94910 1474 aa18.11■□□□□ 0.49
CAST-208ENST00000421689 PLEKHH2Q8IVE3 1493 aa18.11■□□□□ 0.49
CAST-208ENST00000421689 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
CAST-208ENST00000421689 ABCC1P33527 1531 aa18.09■□□□□ 0.49
CAST-208ENST00000421689 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
CAST-208ENST00000421689 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
CAST-208ENST00000421689 SCAPERQ9BY12 1400 aa18.08■□□□□ 0.49
CAST-208ENST00000421689 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
CAST-208ENST00000421689 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
CAST-208ENST00000421689 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
CAST-208ENST00000421689 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
CAST-208ENST00000421689 KDM6BO15054 1643 aa18.05■□□□□ 0.48
CAST-208ENST00000421689 SYCP2Q9BX26 1530 aa18.05■□□□□ 0.48
CAST-208ENST00000421689 DENND4BO75064 1496 aaPredicted RBP18.05■□□□□ 0.48
CAST-208ENST00000421689 ARHGEF12Q9NZN5 1544 aa18.04■□□□□ 0.48
CAST-208ENST00000421689 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
CAST-208ENST00000421689 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
CAST-208ENST00000421689 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
CAST-208ENST00000421689 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
CAST-208ENST00000421689 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
CAST-208ENST00000421689 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
CAST-208ENST00000421689 ARHGEF5Q12774 1597 aa18.02■□□□□ 0.48
CAST-208ENST00000421689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.47
CAST-208ENST00000421689 POGZQ7Z3K3 1410 aa18.01■□□□□ 0.47
CAST-208ENST00000421689 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
CAST-208ENST00000421689 TRAPPC8Q9Y2L5 1435 aa18■□□□□ 0.47
CAST-208ENST00000421689 RAPGEF3O95398 923 aa18■□□□□ 0.47
CAST-208ENST00000421689 FRMPD1Q5SYB0 1578 aa17.99■□□□□ 0.47
CAST-208ENST00000421689 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
CAST-208ENST00000421689 AFAP1Q8N556 730 aa17.98■□□□□ 0.47
CAST-208ENST00000421689 CCDC141Q6ZP82 1450 aa17.98■□□□□ 0.47
CAST-208ENST00000421689 KDM5CP41229 1560 aa17.97■□□□□ 0.47
CAST-208ENST00000421689 ZMYM4Q5VZL5 1548 aa17.95■□□□□ 0.46
CAST-208ENST00000421689 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
CAST-208ENST00000421689 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
CAST-208ENST00000421689 CROCC2H7BZ55 1655 aa17.95■□□□□ 0.46
CAST-208ENST00000421689 ABCC5O15440 1437 aa17.95■□□□□ 0.46
CAST-208ENST00000421689 DAPK1P53355 1430 aa17.95■□□□□ 0.46
CAST-208ENST00000421689 HECW2Q9P2P5 1572 aa17.93■□□□□ 0.46
CAST-208ENST00000421689 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
CAST-208ENST00000421689 MAGI2Q86UL8 1455 aa17.92■□□□□ 0.46
CAST-208ENST00000421689 MLH3Q9UHC1 1453 aa17.92■□□□□ 0.46
CAST-208ENST00000421689 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
CAST-208ENST00000421689 RTEL1-TNFRSF6BF6WH68 1400 aa17.91■□□□□ 0.46
CAST-208ENST00000421689 SHANK2Q9UPX8 1470 aa17.91■□□□□ 0.46
CAST-208ENST00000421689 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
CAST-208ENST00000421689 KIDINS220Q9ULH0 1771 aa17.9■□□□□ 0.46
CAST-208ENST00000421689 INO80Q9ULG1 1556 aaPredicted RBP17.9■□□□□ 0.46
CAST-208ENST00000421689 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.46
CAST-208ENST00000421689 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
CAST-208ENST00000421689 ITGAEP38570 1179 aa17.89■□□□□ 0.45
CAST-208ENST00000421689 ZFYVE16Q7Z3T8 1539 aa17.88■□□□□ 0.45
CAST-208ENST00000421689 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
CAST-208ENST00000421689 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
CAST-208ENST00000421689 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
CAST-208ENST00000421689 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
CAST-208ENST00000421689 ABCA6Q8N139 1617 aa17.84■□□□□ 0.45
CAST-208ENST00000421689 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
CAST-208ENST00000421689 ADGRL2O95490 1459 aa17.84■□□□□ 0.45
CAST-208ENST00000421689 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
CAST-208ENST00000421689 PLXNC1O60486 1568 aa17.83■□□□□ 0.45
CAST-208ENST00000421689 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.45
CAST-208ENST00000421689 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
CAST-208ENST00000421689 ATP10AO60312 1499 aa17.82■□□□□ 0.44
CAST-208ENST00000421689 NCOA1Q15788 1441 aa17.81■□□□□ 0.44
CAST-208ENST00000421689 ROCK1Q13464 1354 aa17.81■□□□□ 0.44
CAST-208ENST00000421689 RRP7BPQ9NSQ0 103 aa17.79■□□□□ 0.44
CAST-208ENST00000421689 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
CAST-208ENST00000421689 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
CAST-208ENST00000421689 A2MP01023 1474 aa17.77■□□□□ 0.44
CAST-208ENST00000421689 DHX29Q7Z478 1369 aaKnown RBP17.77■□□□□ 0.43
CAST-208ENST00000421689 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.43
CAST-208ENST00000421689 GCC2Q8IWJ2 1684 aa17.73■□□□□ 0.43
CAST-208ENST00000421689 SIGLEC1Q9BZZ2 1709 aa17.72■□□□□ 0.43
CAST-208ENST00000421689 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
CAST-208ENST00000421689 AGLP35573 1532 aa17.72■□□□□ 0.43
CAST-208ENST00000421689 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
CAST-208ENST00000421689 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
CAST-208ENST00000421689 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
CAST-208ENST00000421689 NAIPQ13075 1403 aa17.71■□□□□ 0.43
CAST-208ENST00000421689 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.43
CAST-208ENST00000421689 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
CAST-208ENST00000421689 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
CAST-208ENST00000421689 KIF3BO15066 747 aa17.68■□□□□ 0.42
CAST-208ENST00000421689 SETD5Q9C0A6 1442 aa17.65■□□□□ 0.42
CAST-208ENST00000421689 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms