RNA–Protein interactions for RNA: ENST00000421604.1

AP001116.1-201, humanhuman

TSL 3 BASIC

Gene AP001116.1, Length 762 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001116.1-201ENST00000421604 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
AP001116.1-201ENST00000421604 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
AP001116.1-201ENST00000421604 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
AP001116.1-201ENST00000421604 EPRSP07814 1512 aaKnown RBP13.46□□□□□ -0.25
AP001116.1-201ENST00000421604 ABCC10Q5T3U5 1492 aa13.46□□□□□ -0.25
AP001116.1-201ENST00000421604 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
AP001116.1-201ENST00000421604 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
AP001116.1-201ENST00000421604 POTEHQ6S545 545 aa13.44□□□□□ -0.26
AP001116.1-201ENST00000421604 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
AP001116.1-201ENST00000421604 CFAP43Q8NDM7 1665 aa13.43□□□□□ -0.26
AP001116.1-201ENST00000421604 GLI2P10070 1586 aa13.42□□□□□ -0.26
AP001116.1-201ENST00000421604 MAP3K4Q9Y6R4 1608 aa13.4□□□□□ -0.26
AP001116.1-201ENST00000421604 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
AP001116.1-201ENST00000421604 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
AP001116.1-201ENST00000421604 KIF14Q15058 1648 aa13.38□□□□□ -0.27
AP001116.1-201ENST00000421604 ABCA9Q8IUA7 1624 aa13.38□□□□□ -0.27
AP001116.1-201ENST00000421604 TSPOAP1O95153 1857 aa13.36□□□□□ -0.27
AP001116.1-201ENST00000421604 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
AP001116.1-201ENST00000421604 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
AP001116.1-201ENST00000421604 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
AP001116.1-201ENST00000421604 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
AP001116.1-201ENST00000421604 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
AP001116.1-201ENST00000421604 TTC37Q6PGP7 1564 aa13.35□□□□□ -0.27
AP001116.1-201ENST00000421604 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
AP001116.1-201ENST00000421604 EHBP1L1Q8N3D4 1523 aa13.34□□□□□ -0.27
AP001116.1-201ENST00000421604 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
AP001116.1-201ENST00000421604 CDK11AQ9UQ88 783 aaPredicted RBP13.32□□□□□ -0.28
AP001116.1-201ENST00000421604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
AP001116.1-201ENST00000421604 MYO5CQ9NQX4 1742 aa13.31□□□□□ -0.28
AP001116.1-201ENST00000421604 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
AP001116.1-201ENST00000421604 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
AP001116.1-201ENST00000421604 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
AP001116.1-201ENST00000421604 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
AP001116.1-201ENST00000421604 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
AP001116.1-201ENST00000421604 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
AP001116.1-201ENST00000421604 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
AP001116.1-201ENST00000421604 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
AP001116.1-201ENST00000421604 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
AP001116.1-201ENST00000421604 PREX2Q70Z35 1606 aa13.27□□□□□ -0.29
AP001116.1-201ENST00000421604 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
AP001116.1-201ENST00000421604 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
AP001116.1-201ENST00000421604 ARAP3Q8WWN8 1544 aa13.25□□□□□ -0.29
AP001116.1-201ENST00000421604 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
AP001116.1-201ENST00000421604 ITSN2Q9NZM3 1697 aa13.24□□□□□ -0.29
AP001116.1-201ENST00000421604 KDM6BO15054 1643 aa13.24□□□□□ -0.29
AP001116.1-201ENST00000421604 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
AP001116.1-201ENST00000421604 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
AP001116.1-201ENST00000421604 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
AP001116.1-201ENST00000421604 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
AP001116.1-201ENST00000421604 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
AP001116.1-201ENST00000421604 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
AP001116.1-201ENST00000421604 ARHGAP5Q13017 1502 aa13.21□□□□□ -0.29
AP001116.1-201ENST00000421604 FANCAO15360 1455 aa13.21□□□□□ -0.3
AP001116.1-201ENST00000421604 NEO1Q92859 1461 aa13.21□□□□□ -0.3
AP001116.1-201ENST00000421604 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
AP001116.1-201ENST00000421604 PLCH2O75038 1416 aa13.2□□□□□ -0.3
AP001116.1-201ENST00000421604 ABCC1P33527 1531 aa13.16□□□□□ -0.3
AP001116.1-201ENST00000421604 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
AP001116.1-201ENST00000421604 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
AP001116.1-201ENST00000421604 CCNB3Q8WWL7 1395 aa13.16□□□□□ -0.3
AP001116.1-201ENST00000421604 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
AP001116.1-201ENST00000421604 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
AP001116.1-201ENST00000421604 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
AP001116.1-201ENST00000421604 SAMD9LQ8IVG5 1584 aa13.15□□□□□ -0.3
AP001116.1-201ENST00000421604 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
AP001116.1-201ENST00000421604 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
AP001116.1-201ENST00000421604 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
AP001116.1-201ENST00000421604 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
AP001116.1-201ENST00000421604 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
AP001116.1-201ENST00000421604 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
AP001116.1-201ENST00000421604 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
AP001116.1-201ENST00000421604 ZMYM4Q5VZL5 1548 aa13.1□□□□□ -0.31
AP001116.1-201ENST00000421604 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
AP001116.1-201ENST00000421604 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
AP001116.1-201ENST00000421604 POGZQ7Z3K3 1410 aa13.1□□□□□ -0.31
AP001116.1-201ENST00000421604 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
AP001116.1-201ENST00000421604 PLEKHH2Q8IVE3 1493 aa13.09□□□□□ -0.31
AP001116.1-201ENST00000421604 KDM5CP41229 1560 aa13.08□□□□□ -0.32
AP001116.1-201ENST00000421604 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.32
AP001116.1-201ENST00000421604 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
AP001116.1-201ENST00000421604 ZNF518AQ6AHZ1 1483 aa13.08□□□□□ -0.32
AP001116.1-201ENST00000421604 ARHGEF40Q8TER5 1519 aa13.08□□□□□ -0.32
AP001116.1-201ENST00000421604 PROM2Q8N271 834 aa13.07□□□□□ -0.32
AP001116.1-201ENST00000421604 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
AP001116.1-201ENST00000421604 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
AP001116.1-201ENST00000421604 MIA2Q96PC5 1412 aa13.06□□□□□ -0.32
AP001116.1-201ENST00000421604 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
AP001116.1-201ENST00000421604 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
AP001116.1-201ENST00000421604 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
AP001116.1-201ENST00000421604 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
AP001116.1-201ENST00000421604 ZFYVE16Q7Z3T8 1539 aa13.03□□□□□ -0.32
AP001116.1-201ENST00000421604 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
AP001116.1-201ENST00000421604 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
AP001116.1-201ENST00000421604 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
AP001116.1-201ENST00000421604 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.32
AP001116.1-201ENST00000421604 RAPGEF3O95398 923 aa13.02□□□□□ -0.33
AP001116.1-201ENST00000421604 TRAPPC8Q9Y2L5 1435 aa13.02□□□□□ -0.33
AP001116.1-201ENST00000421604 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
AP001116.1-201ENST00000421604 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
AP001116.1-201ENST00000421604 MAGI2Q86UL8 1455 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms