RNA–Protein interactions for RNA: ENST00000421421.1

GAPDHP49-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 49, humanhuman

BASIC

Gene GAPDHP49, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP49-201ENST00000421421 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
GAPDHP49-201ENST00000421421 STK24Q9Y6E0 443 aa9.81□□□□□ -0.84
GAPDHP49-201ENST00000421421 NBR1Q14596 966 aa9.8□□□□□ -0.84
GAPDHP49-201ENST00000421421 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
GAPDHP49-201ENST00000421421 MKRN3Q13064 507 aaKnown RBP9.79□□□□□ -0.84
GAPDHP49-201ENST00000421421 HS3ST6Q96QI5 342 aa9.79□□□□□ -0.84
GAPDHP49-201ENST00000421421 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
GAPDHP49-201ENST00000421421 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
GAPDHP49-201ENST00000421421 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.85
GAPDHP49-201ENST00000421421 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
GAPDHP49-201ENST00000421421 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
GAPDHP49-201ENST00000421421 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
GAPDHP49-201ENST00000421421 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
GAPDHP49-201ENST00000421421 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
GAPDHP49-201ENST00000421421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.73□□□□□ -0.85
GAPDHP49-201ENST00000421421 NACADO15069 1562 aa9.68□□□□□ -0.86
GAPDHP49-201ENST00000421421 ILDR1Q86SU0 546 aaPredicted RBP9.67□□□□□ -0.86
GAPDHP49-201ENST00000421421 PSEN1P49768 467 aa9.66□□□□□ -0.86
GAPDHP49-201ENST00000421421 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
GAPDHP49-201ENST00000421421 G3V3G9 751 aa9.63□□□□□ -0.87
GAPDHP49-201ENST00000421421 HOXB3P14651 431 aaPredicted RBP9.62□□□□□ -0.87
GAPDHP49-201ENST00000421421 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
GAPDHP49-201ENST00000421421 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
GAPDHP49-201ENST00000421421 BOLA1Q9Y3E2 137 aa9.6□□□□□ -0.87
GAPDHP49-201ENST00000421421 ERBB3P21860 1342 aa9.58□□□□□ -0.88
GAPDHP49-201ENST00000421421 DOK7Q18PE1 504 aa9.58□□□□□ -0.88
GAPDHP49-201ENST00000421421 DPY19L2Q6NUT2 758 aa9.58□□□□□ -0.88
GAPDHP49-201ENST00000421421 RNF166Q96A37 237 aaPredicted RBP9.58□□□□□ -0.88
GAPDHP49-201ENST00000421421 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
GAPDHP49-201ENST00000421421 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
GAPDHP49-201ENST00000421421 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
GAPDHP49-201ENST00000421421 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
GAPDHP49-201ENST00000421421 MFRPQ9BY79 579 aa9.54□□□□□ -0.88
GAPDHP49-201ENST00000421421 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
GAPDHP49-201ENST00000421421 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
GAPDHP49-201ENST00000421421 MYO15BQ96JP2 1530 aa9.52□□□□□ -0.88
GAPDHP49-201ENST00000421421 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
GAPDHP49-201ENST00000421421 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
GAPDHP49-201ENST00000421421 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
GAPDHP49-201ENST00000421421 ZSWIM6Q9HCJ5 1215 aa9.47□□□□□ -0.89
GAPDHP49-201ENST00000421421 PPP1R37O75864 691 aa9.46□□□□□ -0.9
GAPDHP49-201ENST00000421421 PTGER2P43116 358 aa9.46□□□□□ -0.9
GAPDHP49-201ENST00000421421 NLRP6P59044 892 aa9.46□□□□□ -0.9
GAPDHP49-201ENST00000421421 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
GAPDHP49-201ENST00000421421 EFCAB3Q8N7B9 438 aa9.46□□□□□ -0.9
GAPDHP49-201ENST00000421421 SOX12O15370 315 aa9.45□□□□□ -0.9
GAPDHP49-201ENST00000421421 FBXO22Q8NEZ5 403 aa9.45□□□□□ -0.9
GAPDHP49-201ENST00000421421 PHF8Q9UPP1 1060 aa9.44□□□□□ -0.9
GAPDHP49-201ENST00000421421 UNC13AQ9UPW8 1703 aa9.42□□□□□ -0.9
GAPDHP49-201ENST00000421421 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
GAPDHP49-201ENST00000421421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
GAPDHP49-201ENST00000421421 LMOD2Q6P5Q4 547 aa9.39□□□□□ -0.91
GAPDHP49-201ENST00000421421 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
GAPDHP49-201ENST00000421421 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
GAPDHP49-201ENST00000421421 E2F4Q16254 413 aa9.37□□□□□ -0.91
GAPDHP49-201ENST00000421421 ARHGEF1Q92888 912 aaKnown RBP9.37□□□□□ -0.91
GAPDHP49-201ENST00000421421 SHROOM4Q9ULL8 1493 aa9.35□□□□□ -0.91
GAPDHP49-201ENST00000421421 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
GAPDHP49-201ENST00000421421 TMEM92Q6UXU6 159 aa9.35□□□□□ -0.91
GAPDHP49-201ENST00000421421 CC2D2AQ9P2K1 1620 aa9.34□□□□□ -0.91
GAPDHP49-201ENST00000421421 ANKRD13DQ6ZTN6 518 aa9.33□□□□□ -0.92
GAPDHP49-201ENST00000421421 DCAF1Q9Y4B6 1507 aa9.32□□□□□ -0.92
GAPDHP49-201ENST00000421421 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
GAPDHP49-201ENST00000421421 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
GAPDHP49-201ENST00000421421 PDE4AP27815 886 aa9.31□□□□□ -0.92
GAPDHP49-201ENST00000421421 ZCCHC6Q5VYS8 1495 aaKnown RBP9.31□□□□□ -0.92
GAPDHP49-201ENST00000421421 LARP6Q9BRS8 491 aaKnown RBP9.3□□□□□ -0.92
GAPDHP49-201ENST00000421421 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
GAPDHP49-201ENST00000421421 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
GAPDHP49-201ENST00000421421 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
GAPDHP49-201ENST00000421421 SEMA3EO15041 775 aa9.28□□□□□ -0.92
GAPDHP49-201ENST00000421421 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
GAPDHP49-201ENST00000421421 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
GAPDHP49-201ENST00000421421 MFSD10Q14728 455 aa9.27□□□□□ -0.93
GAPDHP49-201ENST00000421421 TMEM132AQ24JP5 1023 aa9.27□□□□□ -0.93
GAPDHP49-201ENST00000421421 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
GAPDHP49-201ENST00000421421 CRISPLD2Q9H0B8 497 aa9.26□□□□□ -0.93
GAPDHP49-201ENST00000421421 ZC3H15Q8WU90 426 aaKnown RBP9.25□□□□□ -0.93
GAPDHP49-201ENST00000421421 DDX27Q96GQ7 796 aaKnown RBP9.24□□□□□ -0.93
GAPDHP49-201ENST00000421421 PBX2P40425 430 aa9.22□□□□□ -0.93
GAPDHP49-201ENST00000421421 SCRIBQ14160 1630 aa9.22□□□□□ -0.93
GAPDHP49-201ENST00000421421 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.94
GAPDHP49-201ENST00000421421 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.94
GAPDHP49-201ENST00000421421 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
GAPDHP49-201ENST00000421421 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
GAPDHP49-201ENST00000421421 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
GAPDHP49-201ENST00000421421 CAMK2BQ13554 666 aa9.2□□□□□ -0.94
GAPDHP49-201ENST00000421421 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
GAPDHP49-201ENST00000421421 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
GAPDHP49-201ENST00000421421 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
GAPDHP49-201ENST00000421421 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
GAPDHP49-201ENST00000421421 ZMYND10O75800 440 aa9.13□□□□□ -0.95
GAPDHP49-201ENST00000421421 ERICH6Q7L0X2 663 aa9.13□□□□□ -0.95
GAPDHP49-201ENST00000421421 GPHNQ9NQX3 736 aaPredicted RBP9.13□□□□□ -0.95
GAPDHP49-201ENST00000421421 NUDT7P0C024 238 aa9.12□□□□□ -0.95
GAPDHP49-201ENST00000421421 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
GAPDHP49-201ENST00000421421 POTEEQ6S8J3 1075 aa9.11□□□□□ -0.95
GAPDHP49-201ENST00000421421 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
GAPDHP49-201ENST00000421421 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
GAPDHP49-201ENST00000421421 KIF3CO14782 793 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms