RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 MYO5CQ9NQX4 1742 aa30.89■■■□□ 2.54
VARS2-202ENST00000421263 POGZQ7Z3K3 1410 aa30.88■■■□□ 2.53
VARS2-202ENST00000421263 YEATS2Q9ULM3 1422 aa30.88■■■□□ 2.53
VARS2-202ENST00000421263 CLIP1P30622 1438 aa30.86■■■□□ 2.53
VARS2-202ENST00000421263 ZFYVE16Q7Z3T8 1539 aa30.86■■■□□ 2.53
VARS2-202ENST00000421263 MADDQ8WXG6 1647 aa30.84■■■□□ 2.53
VARS2-202ENST00000421263 CCDC18Q5T9S5 1454 aa30.82■■■□□ 2.52
VARS2-202ENST00000421263 PCF11O94913 1555 aaKnown RBP30.81■■■□□ 2.52
VARS2-202ENST00000421263 SIGLEC1Q9BZZ2 1709 aa30.79■■■□□ 2.52
VARS2-202ENST00000421263 ARHGAP5Q13017 1502 aa30.77■■■□□ 2.52
VARS2-202ENST00000421263 ATP10AO60312 1499 aa30.74■■■□□ 2.51
VARS2-202ENST00000421263 FYCO1Q9BQS8 1478 aa30.74■■■□□ 2.51
VARS2-202ENST00000421263 CDC42BPBQ9Y5S2 1711 aa30.73■■■□□ 2.51
VARS2-202ENST00000421263 ZNF518AQ6AHZ1 1483 aa30.72■■■□□ 2.51
VARS2-202ENST00000421263 AFAP1Q8N556 730 aa30.72■■■□□ 2.51
VARS2-202ENST00000421263 RIMS1Q86UR5 1692 aaKnown RBP30.71■■■□□ 2.51
VARS2-202ENST00000421263 KDM5CP41229 1560 aa30.69■■■□□ 2.5
VARS2-202ENST00000421263 C9orf84Q5VXU9 1444 aa30.68■■■□□ 2.5
VARS2-202ENST00000421263 ILDR1Q86SU0 546 aaPredicted RBP30.68■■■□□ 2.5
VARS2-202ENST00000421263 PREX2Q70Z35 1606 aa30.66■■■□□ 2.5
VARS2-202ENST00000421263 MLECQ14165 292 aa30.64■■■□□ 2.5
VARS2-202ENST00000421263 LMTK3Q96Q04 1460 aa30.63■■■□□ 2.49
VARS2-202ENST00000421263 ARHGEF12Q9NZN5 1544 aa30.63■■■□□ 2.49
VARS2-202ENST00000421263 MLH3Q9UHC1 1453 aa30.61■■■□□ 2.49
VARS2-202ENST00000421263 ABCC1P33527 1531 aa30.59■■■□□ 2.49
VARS2-202ENST00000421263 TRAPPC8Q9Y2L5 1435 aa30.59■■■□□ 2.49
VARS2-202ENST00000421263 CDC42BPAQ5VT25 1732 aa30.59■■■□□ 2.49
VARS2-202ENST00000421263 FER1L4A9Z1Z3 1794 aa30.56■■■□□ 2.48
VARS2-202ENST00000421263 DIP2CQ9Y2E4 1556 aa30.55■■■□□ 2.48
VARS2-202ENST00000421263 REREQ9P2R6 1566 aa30.54■■■□□ 2.48
VARS2-202ENST00000421263 GPATCH8Q9UKJ3 1502 aaKnown RBP30.54■■■□□ 2.48
VARS2-202ENST00000421263 ITSN2Q9NZM3 1697 aa30.53■■■□□ 2.48
VARS2-202ENST00000421263 MYT1LQ9UL68 1186 aa30.53■■■□□ 2.48
VARS2-202ENST00000421263 PLPPR3Q6T4P5 718 aa30.51■■■□□ 2.47
VARS2-202ENST00000421263 ABCA6Q8N139 1617 aa30.49■■■□□ 2.47
VARS2-202ENST00000421263 ZNF777Q9ULD5 760 aaPredicted RBP30.46■■■□□ 2.47
VARS2-202ENST00000421263 AGLP35573 1532 aa30.46■■■□□ 2.47
VARS2-202ENST00000421263 SAMD9LQ8IVG5 1584 aa30.45■■■□□ 2.47
VARS2-202ENST00000421263 HSPA2P54652 639 aa30.45■■■□□ 2.47
VARS2-202ENST00000421263 KIDINS220Q9ULH0 1771 aa30.45■■■□□ 2.46
VARS2-202ENST00000421263 CEBPAP49715 358 aaPredicted RBP30.43■■■□□ 2.46
VARS2-202ENST00000421263 CEP162Q5TB80 1403 aa30.43■■■□□ 2.46
VARS2-202ENST00000421263 MTUS2Q5JR59 1369 aa30.42■■■□□ 2.46
VARS2-202ENST00000421263 KIAA1107Q9UPP5 1409 aa30.42■■■□□ 2.46
VARS2-202ENST00000421263 HNRNPMP52272 730 aaKnown RBP eCLIP30.41■■■□□ 2.46
VARS2-202ENST00000421263 CFDP1Q9UEE9 299 aaPredicted RBP30.41■■■□□ 2.46
VARS2-202ENST00000421263 CCNB3Q8WWL7 1395 aa30.41■■■□□ 2.46
VARS2-202ENST00000421263 SYCP2Q9BX26 1530 aa30.38■■■□□ 2.45
VARS2-202ENST00000421263 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
VARS2-202ENST00000421263 SPAG9O60271 1321 aaKnown RBP30.35■■■□□ 2.45
VARS2-202ENST00000421263 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
VARS2-202ENST00000421263 EHBP1L1Q8N3D4 1523 aa30.32■■■□□ 2.44
VARS2-202ENST00000421263 PREX1Q8TCU6 1659 aa30.31■■■□□ 2.44
VARS2-202ENST00000421263 FBXO41Q8TF61 875 aa30.3■■■□□ 2.44
VARS2-202ENST00000421263 TIAM1Q13009 1591 aa30.28■■■□□ 2.44
VARS2-202ENST00000421263 ESF1Q9H501 851 aaKnown RBP30.27■■■□□ 2.44
VARS2-202ENST00000421263 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
VARS2-202ENST00000421263 ZNF644Q9H582 1327 aaPredicted RBP30.26■■■□□ 2.44
VARS2-202ENST00000421263 C3P01024 1663 aa30.26■■■□□ 2.43
VARS2-202ENST00000421263 INO80Q9ULG1 1556 aaPredicted RBP30.24■■■□□ 2.43
VARS2-202ENST00000421263 CNTLNQ9NXG0 1405 aa30.24■■■□□ 2.43
VARS2-202ENST00000421263 LOC105371045A0A1W2PR82 267 aa30.24■■■□□ 2.43
VARS2-202ENST00000421263 MBD5Q9P267 1494 aa30.24■■■□□ 2.43
VARS2-202ENST00000421263 UHRF1BP1Q6BDS2 1440 aa30.22■■■□□ 2.43
VARS2-202ENST00000421263 A2MP01023 1474 aa30.19■■■□□ 2.42
VARS2-202ENST00000421263 PLXNC1O60486 1568 aa30.19■■■□□ 2.42
VARS2-202ENST00000421263 SUPT6HQ7KZ85 1726 aaKnown RBP30.18■■■□□ 2.42
VARS2-202ENST00000421263 NCOA2Q15596 1464 aa30.16■■■□□ 2.42
VARS2-202ENST00000421263 RTEL1-TNFRSF6BF6WH68 1400 aa30.15■■■□□ 2.42
VARS2-202ENST00000421263 ZMYM3Q14202 1370 aa30.14■■■□□ 2.41
VARS2-202ENST00000421263 MROH2AA6NES4 1674 aa30.14■■■□□ 2.41
VARS2-202ENST00000421263 VPS8Q8N3P4 1428 aa30.13■■■□□ 2.41
VARS2-202ENST00000421263 STRCQ7RTU9 1775 aa30.13■■■□□ 2.41
VARS2-202ENST00000421263 DMRT2Q9Y5R5 561 aa30.12■■■□□ 2.41
VARS2-202ENST00000421263 RSPH4AQ5TD94 716 aa30.1■■■□□ 2.41
VARS2-202ENST00000421263 PPP6R1Q9UPN7 881 aa30.1■■■□□ 2.41
VARS2-202ENST00000421263 NPATQ14207 1427 aa30.1■■■□□ 2.41
VARS2-202ENST00000421263 ADGBQ8N7X0 1667 aa30.1■■■□□ 2.41
VARS2-202ENST00000421263 GGT6Q6P531 493 aa30.07■■■□□ 2.4
VARS2-202ENST00000421263 CERKQ8TCT0 537 aa30.07■■■□□ 2.4
VARS2-202ENST00000421263 DHX29Q7Z478 1369 aaKnown RBP30.06■■■□□ 2.4
VARS2-202ENST00000421263 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
VARS2-202ENST00000421263 CAMSAP2Q08AD1 1489 aa30.05■■■□□ 2.4
VARS2-202ENST00000421263 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
VARS2-202ENST00000421263 CLTCQ00610 1675 aaKnown RBP30.03■■■□□ 2.4
VARS2-202ENST00000421263 MAP3K1Q13233 1512 aa30.01■■■□□ 2.4
VARS2-202ENST00000421263 PTPRTO14522 1441 aa30■■■□□ 2.39
VARS2-202ENST00000421263 KANK4Q5T7N3 995 aaPredicted RBP29.98■■■□□ 2.39
VARS2-202ENST00000421263 PTPRKQ15262 1439 aa29.97■■■□□ 2.39
VARS2-202ENST00000421263 ARHGEF5Q12774 1597 aa29.96■■■□□ 2.39
VARS2-202ENST00000421263 NCOA1Q15788 1441 aa29.96■■■□□ 2.39
VARS2-202ENST00000421263 TSPY4P0CV99 314 aa29.93■■■□□ 2.38
VARS2-202ENST00000421263 TSPY10P0CW01 314 aa29.93■■■□□ 2.38
VARS2-202ENST00000421263 KIF3BO15066 747 aa29.92■■■□□ 2.38
VARS2-202ENST00000421263 CAMSAP1Q5T5Y3 1602 aa29.89■■■□□ 2.38
VARS2-202ENST00000421263 MIA2Q96PC5 1412 aa29.88■■■□□ 2.37
VARS2-202ENST00000421263 MYO3AQ8NEV4 1616 aa29.85■■■□□ 2.37
VARS2-202ENST00000421263 ZNF142P52746 1687 aaPredicted RBP29.85■■■□□ 2.37
VARS2-202ENST00000421263 MYOM3Q5VTT5 1437 aa29.84■■■□□ 2.37
VARS2-202ENST00000421263 FAM135AQ9P2D6 1515 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms