RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
FAAP20-208ENST00000420964 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
FAAP20-208ENST00000420964 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
FAAP20-208ENST00000420964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
FAAP20-208ENST00000420964 PPRC1Q5VV67 1664 aaKnown RBP18.77■□□□□ 0.6
FAAP20-208ENST00000420964 KDM6BO15054 1643 aa18.77■□□□□ 0.6
FAAP20-208ENST00000420964 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
FAAP20-208ENST00000420964 KDM4FA0A1W2PPD8 638 aa18.76■□□□□ 0.59
FAAP20-208ENST00000420964 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
FAAP20-208ENST00000420964 CAMSAP2Q08AD1 1489 aa18.76■□□□□ 0.59
FAAP20-208ENST00000420964 ARAP3Q8WWN8 1544 aa18.75■□□□□ 0.59
FAAP20-208ENST00000420964 CFDP1Q9UEE9 299 aaPredicted RBP18.75■□□□□ 0.59
FAAP20-208ENST00000420964 GLI2P10070 1586 aa18.74■□□□□ 0.59
FAAP20-208ENST00000420964 PLCH2O75038 1416 aa18.74■□□□□ 0.59
FAAP20-208ENST00000420964 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
FAAP20-208ENST00000420964 MAP3K4Q9Y6R4 1608 aa18.71■□□□□ 0.58
FAAP20-208ENST00000420964 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
FAAP20-208ENST00000420964 DNMT1P26358 1616 aaKnown RBP18.69■□□□□ 0.58
FAAP20-208ENST00000420964 ZNF644Q9H582 1327 aaPredicted RBP18.69■□□□□ 0.58
FAAP20-208ENST00000420964 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
FAAP20-208ENST00000420964 CD109Q6YHK3 1445 aa18.67■□□□□ 0.58
FAAP20-208ENST00000420964 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
FAAP20-208ENST00000420964 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
FAAP20-208ENST00000420964 FANCAO15360 1455 aa18.65■□□□□ 0.58
FAAP20-208ENST00000420964 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
FAAP20-208ENST00000420964 ABCC1P33527 1531 aa18.65■□□□□ 0.58
FAAP20-208ENST00000420964 SYCP2Q9BX26 1530 aa18.65■□□□□ 0.58
FAAP20-208ENST00000420964 ITGAEP38570 1179 aa18.65■□□□□ 0.58
FAAP20-208ENST00000420964 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.58
FAAP20-208ENST00000420964 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.57
FAAP20-208ENST00000420964 DAPK1P53355 1430 aa18.64■□□□□ 0.57
FAAP20-208ENST00000420964 ABCC5O15440 1437 aa18.61■□□□□ 0.57
FAAP20-208ENST00000420964 PTPRKQ15262 1439 aa18.61■□□□□ 0.57
FAAP20-208ENST00000420964 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
FAAP20-208ENST00000420964 MBD5Q9P267 1494 aa18.6■□□□□ 0.57
FAAP20-208ENST00000420964 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
FAAP20-208ENST00000420964 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
FAAP20-208ENST00000420964 ADGBQ8N7X0 1667 aa18.59■□□□□ 0.57
FAAP20-208ENST00000420964 ARHGEF12Q9NZN5 1544 aa18.58■□□□□ 0.56
FAAP20-208ENST00000420964 ADGRL1O94910 1474 aa18.58■□□□□ 0.56
FAAP20-208ENST00000420964 NEO1Q92859 1461 aa18.58■□□□□ 0.56
FAAP20-208ENST00000420964 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
FAAP20-208ENST00000420964 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.56
FAAP20-208ENST00000420964 TEX14Q8IWB6 1497 aa18.54■□□□□ 0.56
FAAP20-208ENST00000420964 GCC2Q8IWJ2 1684 aa18.54■□□□□ 0.56
FAAP20-208ENST00000420964 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
FAAP20-208ENST00000420964 MAST1Q9Y2H9 1570 aa18.53■□□□□ 0.56
FAAP20-208ENST00000420964 ROCK1Q13464 1354 aa18.52■□□□□ 0.55
FAAP20-208ENST00000420964 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
FAAP20-208ENST00000420964 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
FAAP20-208ENST00000420964 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
FAAP20-208ENST00000420964 TRAPPC8Q9Y2L5 1435 aa18.51■□□□□ 0.55
FAAP20-208ENST00000420964 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
FAAP20-208ENST00000420964 CHIC2Q9UKJ5 165 aa18.5■□□□□ 0.55
FAAP20-208ENST00000420964 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
FAAP20-208ENST00000420964 NAIPQ13075 1403 aa18.48■□□□□ 0.55
FAAP20-208ENST00000420964 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
FAAP20-208ENST00000420964 PLXNC1O60486 1568 aa18.47■□□□□ 0.55
FAAP20-208ENST00000420964 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
FAAP20-208ENST00000420964 TSPY4P0CV99 314 aa18.47■□□□□ 0.55
FAAP20-208ENST00000420964 TSPY10P0CW01 314 aa18.47■□□□□ 0.55
FAAP20-208ENST00000420964 ZFYVE16Q7Z3T8 1539 aa18.47■□□□□ 0.55
FAAP20-208ENST00000420964 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
FAAP20-208ENST00000420964 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
FAAP20-208ENST00000420964 NCOA1Q15788 1441 aa18.46■□□□□ 0.55
FAAP20-208ENST00000420964 KDM5CP41229 1560 aa18.46■□□□□ 0.55
FAAP20-208ENST00000420964 RICTORQ6R327 1708 aa18.45■□□□□ 0.54
FAAP20-208ENST00000420964 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
FAAP20-208ENST00000420964 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
FAAP20-208ENST00000420964 RRP7BPQ9NSQ0 103 aa18.44■□□□□ 0.54
FAAP20-208ENST00000420964 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
FAAP20-208ENST00000420964 FRMPD1Q5SYB0 1578 aa18.42■□□□□ 0.54
FAAP20-208ENST00000420964 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
FAAP20-208ENST00000420964 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
FAAP20-208ENST00000420964 HECW2Q9P2P5 1572 aa18.42■□□□□ 0.54
FAAP20-208ENST00000420964 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
FAAP20-208ENST00000420964 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
FAAP20-208ENST00000420964 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
FAAP20-208ENST00000420964 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
FAAP20-208ENST00000420964 MLH3Q9UHC1 1453 aa18.37■□□□□ 0.53
FAAP20-208ENST00000420964 DUOX2Q9NRD8 1548 aa18.36■□□□□ 0.53
FAAP20-208ENST00000420964 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
FAAP20-208ENST00000420964 RAPGEF3O95398 923 aa18.35■□□□□ 0.53
FAAP20-208ENST00000420964 HRCP23327 699 aa18.34■□□□□ 0.53
FAAP20-208ENST00000420964 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
FAAP20-208ENST00000420964 ERBINQ96RT1 1412 aa18.32■□□□□ 0.52
FAAP20-208ENST00000420964 DIP2CQ9Y2E4 1556 aa18.31■□□□□ 0.52
FAAP20-208ENST00000420964 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
FAAP20-208ENST00000420964 MAGI2Q86UL8 1455 aa18.29■□□□□ 0.52
FAAP20-208ENST00000420964 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
FAAP20-208ENST00000420964 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
FAAP20-208ENST00000420964 UNC13BO14795 1591 aa18.27■□□□□ 0.52
FAAP20-208ENST00000420964 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
FAAP20-208ENST00000420964 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
FAAP20-208ENST00000420964 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
FAAP20-208ENST00000420964 A2MP01023 1474 aa18.26■□□□□ 0.51
FAAP20-208ENST00000420964 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
FAAP20-208ENST00000420964 DHX29Q7Z478 1369 aaKnown RBP18.24■□□□□ 0.51
FAAP20-208ENST00000420964 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
FAAP20-208ENST00000420964 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms