RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 PLCH2O75038 1416 aa13.13□□□□□ -0.31
SEMA3F-204ENST00000420831 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
SEMA3F-204ENST00000420831 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
SEMA3F-204ENST00000420831 FANCAO15360 1455 aa13.13□□□□□ -0.31
SEMA3F-204ENST00000420831 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
SEMA3F-204ENST00000420831 NEO1Q92859 1461 aa13.12□□□□□ -0.31
SEMA3F-204ENST00000420831 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
SEMA3F-204ENST00000420831 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
SEMA3F-204ENST00000420831 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
SEMA3F-204ENST00000420831 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
SEMA3F-204ENST00000420831 ARHGEF12Q9NZN5 1544 aa13.07□□□□□ -0.32
SEMA3F-204ENST00000420831 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
SEMA3F-204ENST00000420831 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
SEMA3F-204ENST00000420831 EFCAB2Q5VUJ9 269 aa13.06□□□□□ -0.32
SEMA3F-204ENST00000420831 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
SEMA3F-204ENST00000420831 MTUS2Q5JR59 1369 aa13.06□□□□□ -0.32
SEMA3F-204ENST00000420831 ADGRL1O94910 1474 aa13.05□□□□□ -0.32
SEMA3F-204ENST00000420831 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
SEMA3F-204ENST00000420831 GPATCH8Q9UKJ3 1502 aaKnown RBP13.05□□□□□ -0.32
SEMA3F-204ENST00000420831 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
SEMA3F-204ENST00000420831 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-204ENST00000420831 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-204ENST00000420831 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
SEMA3F-204ENST00000420831 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
SEMA3F-204ENST00000420831 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
SEMA3F-204ENST00000420831 RICTORQ6R327 1708 aa13.02□□□□□ -0.32
SEMA3F-204ENST00000420831 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.32
SEMA3F-204ENST00000420831 POGZQ7Z3K3 1410 aa13.02□□□□□ -0.33
SEMA3F-204ENST00000420831 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.33
SEMA3F-204ENST00000420831 TIAM1Q13009 1591 aa13.01□□□□□ -0.33
SEMA3F-204ENST00000420831 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
SEMA3F-204ENST00000420831 CDC42BPAQ5VT25 1732 aa13□□□□□ -0.33
SEMA3F-204ENST00000420831 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
SEMA3F-204ENST00000420831 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
SEMA3F-204ENST00000420831 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
SEMA3F-204ENST00000420831 CCNB3Q8WWL7 1395 aa12.99□□□□□ -0.33
SEMA3F-204ENST00000420831 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
SEMA3F-204ENST00000420831 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
SEMA3F-204ENST00000420831 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
SEMA3F-204ENST00000420831 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
SEMA3F-204ENST00000420831 CFDP1Q9UEE9 299 aaPredicted RBP12.98□□□□□ -0.33
SEMA3F-204ENST00000420831 ABCC1P33527 1531 aa12.98□□□□□ -0.33
SEMA3F-204ENST00000420831 ZMYM4Q5VZL5 1548 aa12.97□□□□□ -0.33
SEMA3F-204ENST00000420831 ARHGEF40Q8TER5 1519 aa12.95□□□□□ -0.34
SEMA3F-204ENST00000420831 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
SEMA3F-204ENST00000420831 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
SEMA3F-204ENST00000420831 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
SEMA3F-204ENST00000420831 KDM5CP41229 1560 aa12.94□□□□□ -0.34
SEMA3F-204ENST00000420831 ZNF518AQ6AHZ1 1483 aa12.93□□□□□ -0.34
SEMA3F-204ENST00000420831 MLECQ14165 292 aa12.93□□□□□ -0.34
SEMA3F-204ENST00000420831 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
SEMA3F-204ENST00000420831 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
SEMA3F-204ENST00000420831 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
SEMA3F-204ENST00000420831 PPARGC1BQ86YN6 1023 aaKnown RBP12.91□□□□□ -0.34
SEMA3F-204ENST00000420831 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
SEMA3F-204ENST00000420831 ATP10AO60312 1499 aa12.91□□□□□ -0.34
SEMA3F-204ENST00000420831 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
SEMA3F-204ENST00000420831 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
SEMA3F-204ENST00000420831 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
SEMA3F-204ENST00000420831 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
SEMA3F-204ENST00000420831 DIP2CQ9Y2E4 1556 aa12.89□□□□□ -0.35
SEMA3F-204ENST00000420831 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
SEMA3F-204ENST00000420831 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
SEMA3F-204ENST00000420831 CAMSAP2Q08AD1 1489 aa12.88□□□□□ -0.35
SEMA3F-204ENST00000420831 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
SEMA3F-204ENST00000420831 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
SEMA3F-204ENST00000420831 ADAMTSL3P82987 1691 aa12.87□□□□□ -0.35
SEMA3F-204ENST00000420831 HECW2Q9P2P5 1572 aa12.87□□□□□ -0.35
SEMA3F-204ENST00000420831 BCORL1Q5H9F3 1711 aa12.87□□□□□ -0.35
SEMA3F-204ENST00000420831 C9orf84Q5VXU9 1444 aa12.87□□□□□ -0.35
SEMA3F-204ENST00000420831 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
SEMA3F-204ENST00000420831 APLP2Q06481 763 aa12.85□□□□□ -0.35
SEMA3F-204ENST00000420831 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
SEMA3F-204ENST00000420831 PTPRMP28827 1452 aa12.85□□□□□ -0.35
SEMA3F-204ENST00000420831 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
SEMA3F-204ENST00000420831 ZBTB22O15209 634 aa12.83□□□□□ -0.36
SEMA3F-204ENST00000420831 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-204ENST00000420831 ATP7AQ04656 1500 aa12.82□□□□□ -0.36
SEMA3F-204ENST00000420831 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-204ENST00000420831 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
SEMA3F-204ENST00000420831 CCDC141Q6ZP82 1450 aa12.79□□□□□ -0.36
SEMA3F-204ENST00000420831 RIMS1Q86UR5 1692 aaKnown RBP12.79□□□□□ -0.36
SEMA3F-204ENST00000420831 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
SEMA3F-204ENST00000420831 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
SEMA3F-204ENST00000420831 ABCC5O15440 1437 aa12.78□□□□□ -0.36
SEMA3F-204ENST00000420831 A2MP01023 1474 aa12.78□□□□□ -0.36
SEMA3F-204ENST00000420831 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.37
SEMA3F-204ENST00000420831 AGLP35573 1532 aa12.77□□□□□ -0.37
SEMA3F-204ENST00000420831 PLXNC1O60486 1568 aa12.76□□□□□ -0.37
SEMA3F-204ENST00000420831 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
SEMA3F-204ENST00000420831 GGT6Q6P531 493 aa12.75□□□□□ -0.37
SEMA3F-204ENST00000420831 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
SEMA3F-204ENST00000420831 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
SEMA3F-204ENST00000420831 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
SEMA3F-204ENST00000420831 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
SEMA3F-204ENST00000420831 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
SEMA3F-204ENST00000420831 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
SEMA3F-204ENST00000420831 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-204ENST00000420831 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
SEMA3F-204ENST00000420831 DAPK1P53355 1430 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms