RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
BDNF-209ENST00000420794 ABCA8O94911 1581 aa10.62□□□□□ -0.71
BDNF-209ENST00000420794 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
BDNF-209ENST00000420794 ARHGEF11O15085 1522 aa10.62□□□□□ -0.71
BDNF-209ENST00000420794 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
BDNF-209ENST00000420794 UHRF1BP1LA0JNW5 1464 aa10.6□□□□□ -0.71
BDNF-209ENST00000420794 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
BDNF-209ENST00000420794 ERCC6L2Q5T890 1561 aa10.58□□□□□ -0.72
BDNF-209ENST00000420794 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
BDNF-209ENST00000420794 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
BDNF-209ENST00000420794 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
BDNF-209ENST00000420794 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
BDNF-209ENST00000420794 CD109Q6YHK3 1445 aa10.57□□□□□ -0.72
BDNF-209ENST00000420794 SHROOM2Q13796 1616 aa10.56□□□□□ -0.72
BDNF-209ENST00000420794 KANK1Q14678 1352 aa10.56□□□□□ -0.72
BDNF-209ENST00000420794 DAPK1P53355 1430 aa10.56□□□□□ -0.72
BDNF-209ENST00000420794 KDM5BQ9UGL1 1544 aa10.56□□□□□ -0.72
BDNF-209ENST00000420794 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
BDNF-209ENST00000420794 NUP155O75694 1391 aa10.55□□□□□ -0.72
BDNF-209ENST00000420794 AFAP1Q8N556 730 aa10.55□□□□□ -0.72
BDNF-209ENST00000420794 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
BDNF-209ENST00000420794 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
BDNF-209ENST00000420794 PLCH2O75038 1416 aa10.54□□□□□ -0.72
BDNF-209ENST00000420794 ZNF326Q5BKZ1 582 aaKnown RBP10.54□□□□□ -0.72
BDNF-209ENST00000420794 C9orf84Q5VXU9 1444 aa10.53□□□□□ -0.72
BDNF-209ENST00000420794 KIF3BO15066 747 aa10.53□□□□□ -0.72
BDNF-209ENST00000420794 ARID4BQ4LE39 1312 aaPredicted RBP10.53□□□□□ -0.72
BDNF-209ENST00000420794 ITSN2Q9NZM3 1697 aa10.53□□□□□ -0.72
BDNF-209ENST00000420794 HFM1A2PYH4 1435 aa10.53□□□□□ -0.72
BDNF-209ENST00000420794 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
BDNF-209ENST00000420794 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
BDNF-209ENST00000420794 ROCK1Q13464 1354 aa10.52□□□□□ -0.72
BDNF-209ENST00000420794 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.73
BDNF-209ENST00000420794 PKD2Q13563 968 aa10.52□□□□□ -0.73
BDNF-209ENST00000420794 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
BDNF-209ENST00000420794 ANKRD50Q9ULJ7 1429 aa10.52□□□□□ -0.73
BDNF-209ENST00000420794 GGT6Q6P531 493 aa10.51□□□□□ -0.73
BDNF-209ENST00000420794 ABCC5O15440 1437 aa10.51□□□□□ -0.73
BDNF-209ENST00000420794 DHX57Q6P158 1386 aaKnown RBP10.51□□□□□ -0.73
BDNF-209ENST00000420794 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
BDNF-209ENST00000420794 FANCAO15360 1455 aa10.51□□□□□ -0.73
BDNF-209ENST00000420794 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
BDNF-209ENST00000420794 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
BDNF-209ENST00000420794 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
BDNF-209ENST00000420794 ADGRL1O94910 1474 aa10.49□□□□□ -0.73
BDNF-209ENST00000420794 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
BDNF-209ENST00000420794 AKNAQ7Z591 1439 aa10.48□□□□□ -0.73
BDNF-209ENST00000420794 KIAA1107Q9UPP5 1409 aa10.48□□□□□ -0.73
BDNF-209ENST00000420794 NAIPQ13075 1403 aa10.48□□□□□ -0.73
BDNF-209ENST00000420794 ZCCHC11Q5TAX3 1644 aaKnown RBP10.47□□□□□ -0.73
BDNF-209ENST00000420794 ABCC10Q5T3U5 1492 aa10.46□□□□□ -0.73
BDNF-209ENST00000420794 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
BDNF-209ENST00000420794 NCOA1Q15788 1441 aa10.46□□□□□ -0.74
BDNF-209ENST00000420794 RAPGEF3O95398 923 aa10.46□□□□□ -0.74
BDNF-209ENST00000420794 FOXD1Q16676 465 aa10.46□□□□□ -0.74
BDNF-209ENST00000420794 MLECQ14165 292 aa10.45□□□□□ -0.74
BDNF-209ENST00000420794 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
BDNF-209ENST00000420794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.44□□□□□ -0.74
BDNF-209ENST00000420794 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
BDNF-209ENST00000420794 RGL3Q3MIN7 710 aa10.44□□□□□ -0.74
BDNF-209ENST00000420794 DENND4BO75064 1496 aaPredicted RBP10.44□□□□□ -0.74
BDNF-209ENST00000420794 PTPRKQ15262 1439 aa10.44□□□□□ -0.74
BDNF-209ENST00000420794 TEX14Q8IWB6 1497 aa10.44□□□□□ -0.74
BDNF-209ENST00000420794 POLR3GLQ9BT43 218 aa10.43□□□□□ -0.74
BDNF-209ENST00000420794 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
BDNF-209ENST00000420794 SYCP2Q9BX26 1530 aa10.42□□□□□ -0.74
BDNF-209ENST00000420794 PLPPR3Q6T4P5 718 aa10.41□□□□□ -0.74
BDNF-209ENST00000420794 SHANK2Q9UPX8 1470 aa10.41□□□□□ -0.74
BDNF-209ENST00000420794 RIMBP3CA6NJZ7 1639 aa10.4□□□□□ -0.74
BDNF-209ENST00000420794 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.74
BDNF-209ENST00000420794 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.74
BDNF-209ENST00000420794 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
BDNF-209ENST00000420794 DNMT1P26358 1616 aaKnown RBP10.39□□□□□ -0.75
BDNF-209ENST00000420794 TRAPPC8Q9Y2L5 1435 aa10.39□□□□□ -0.75
BDNF-209ENST00000420794 BCANQ96GW7 911 aa10.39□□□□□ -0.75
BDNF-209ENST00000420794 MYO5CQ9NQX4 1742 aa10.39□□□□□ -0.75
BDNF-209ENST00000420794 LRRIQ1Q96JM4 1722 aa10.39□□□□□ -0.75
BDNF-209ENST00000420794 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
BDNF-209ENST00000420794 TTC37Q6PGP7 1564 aa10.38□□□□□ -0.75
BDNF-209ENST00000420794 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
BDNF-209ENST00000420794 RTEL1-TNFRSF6BF6WH68 1400 aa10.38□□□□□ -0.75
BDNF-209ENST00000420794 NEO1Q92859 1461 aa10.37□□□□□ -0.75
BDNF-209ENST00000420794 DCAF11Q8TEB1 546 aa10.37□□□□□ -0.75
BDNF-209ENST00000420794 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
BDNF-209ENST00000420794 EIF4G2P78344 907 aaKnown RBP eCLIP10.36□□□□□ -0.75
BDNF-209ENST00000420794 PREX2Q70Z35 1606 aa10.36□□□□□ -0.75
BDNF-209ENST00000420794 PPP1R15AO75807 674 aaPredicted RBP10.36□□□□□ -0.75
BDNF-209ENST00000420794 DHX29Q7Z478 1369 aaKnown RBP10.36□□□□□ -0.75
BDNF-209ENST00000420794 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 ARAP3Q8WWN8 1544 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 ADGRL2O95490 1459 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 L3MBTL2Q969R5 705 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 MAPKBP1O60336 1514 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 DUOX2Q9NRD8 1548 aa10.35□□□□□ -0.75
BDNF-209ENST00000420794 CFAP74Q9C0B2 1584 aa10.34□□□□□ -0.75
BDNF-209ENST00000420794 ERBINQ96RT1 1412 aa10.34□□□□□ -0.75
BDNF-209ENST00000420794 SAMD9LQ8IVG5 1584 aa10.33□□□□□ -0.76
BDNF-209ENST00000420794 CDC42BPAQ5VT25 1732 aa10.33□□□□□ -0.76
BDNF-209ENST00000420794 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms