RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 CFDP1Q9UEE9 299 aaPredicted RBP23.44■■□□□ 1.34
CDRT15-201ENST00000420162 PREX2Q70Z35 1606 aa23.44■■□□□ 1.34
CDRT15-201ENST00000420162 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
CDRT15-201ENST00000420162 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
CDRT15-201ENST00000420162 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
CDRT15-201ENST00000420162 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
CDRT15-201ENST00000420162 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
CDRT15-201ENST00000420162 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
CDRT15-201ENST00000420162 MYOM3Q5VTT5 1437 aa23.37■■□□□ 1.33
CDRT15-201ENST00000420162 ZNF777Q9ULD5 760 aaPredicted RBP23.36■■□□□ 1.33
CDRT15-201ENST00000420162 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
CDRT15-201ENST00000420162 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
CDRT15-201ENST00000420162 PLEKHH2Q8IVE3 1493 aa23.31■■□□□ 1.32
CDRT15-201ENST00000420162 SCAPERQ9BY12 1400 aa23.31■■□□□ 1.32
CDRT15-201ENST00000420162 KDM6BO15054 1643 aa23.3■■□□□ 1.32
CDRT15-201ENST00000420162 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
CDRT15-201ENST00000420162 KIAA1107Q9UPP5 1409 aa23.29■■□□□ 1.32
CDRT15-201ENST00000420162 DENND4BO75064 1496 aaPredicted RBP23.29■■□□□ 1.32
CDRT15-201ENST00000420162 SAMD9LQ8IVG5 1584 aa23.28■■□□□ 1.32
CDRT15-201ENST00000420162 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
CDRT15-201ENST00000420162 FGD6Q6ZV73 1430 aa23.27■■□□□ 1.32
CDRT15-201ENST00000420162 ABCC1P33527 1531 aa23.26■■□□□ 1.31
CDRT15-201ENST00000420162 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
CDRT15-201ENST00000420162 HNRNPMP52272 730 aaKnown RBP eCLIP23.24■■□□□ 1.31
CDRT15-201ENST00000420162 RSPH4AQ5TD94 716 aa23.24■■□□□ 1.31
CDRT15-201ENST00000420162 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
CDRT15-201ENST00000420162 POGZQ7Z3K3 1410 aa23.23■■□□□ 1.31
CDRT15-201ENST00000420162 ARHGEF12Q9NZN5 1544 aa23.22■■□□□ 1.31
CDRT15-201ENST00000420162 ZNF518AQ6AHZ1 1483 aa23.21■■□□□ 1.31
CDRT15-201ENST00000420162 PTPN23Q9H3S7 1636 aa23.21■■□□□ 1.31
CDRT15-201ENST00000420162 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
CDRT15-201ENST00000420162 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
CDRT15-201ENST00000420162 RICTORQ6R327 1708 aa23.19■■□□□ 1.3
CDRT15-201ENST00000420162 TCOF1Q13428 1488 aaKnown RBP23.19■■□□□ 1.3
CDRT15-201ENST00000420162 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
CDRT15-201ENST00000420162 TRAPPC8Q9Y2L5 1435 aa23.18■■□□□ 1.3
CDRT15-201ENST00000420162 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
CDRT15-201ENST00000420162 FAM50AQ14320 339 aaKnown RBP23.16■■□□□ 1.3
CDRT15-201ENST00000420162 ARHGEF5Q12774 1597 aa23.14■■□□□ 1.3
CDRT15-201ENST00000420162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDRT15-201ENST00000420162 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
CDRT15-201ENST00000420162 MAGI2Q86UL8 1455 aa23.13■■□□□ 1.29
CDRT15-201ENST00000420162 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
CDRT15-201ENST00000420162 KDM5CP41229 1560 aa23.13■■□□□ 1.29
CDRT15-201ENST00000420162 CCDC141Q6ZP82 1450 aa23.12■■□□□ 1.29
CDRT15-201ENST00000420162 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
CDRT15-201ENST00000420162 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
CDRT15-201ENST00000420162 SPAG9O60271 1321 aaKnown RBP23.11■■□□□ 1.29
CDRT15-201ENST00000420162 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
CDRT15-201ENST00000420162 MYT1LQ9UL68 1186 aa23.1■■□□□ 1.29
CDRT15-201ENST00000420162 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
CDRT15-201ENST00000420162 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
CDRT15-201ENST00000420162 ABCC5O15440 1437 aa23.06■■□□□ 1.28
CDRT15-201ENST00000420162 DAPK1P53355 1430 aa23.05■■□□□ 1.28
CDRT15-201ENST00000420162 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
CDRT15-201ENST00000420162 ZFYVE16Q7Z3T8 1539 aa23.04■■□□□ 1.28
CDRT15-201ENST00000420162 SHANK2Q9UPX8 1470 aa23.02■■□□□ 1.28
CDRT15-201ENST00000420162 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
CDRT15-201ENST00000420162 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
CDRT15-201ENST00000420162 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
CDRT15-201ENST00000420162 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
CDRT15-201ENST00000420162 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
CDRT15-201ENST00000420162 ARHGEF40Q8TER5 1519 aa23■■□□□ 1.27
CDRT15-201ENST00000420162 MAST1Q9Y2H9 1570 aa23■■□□□ 1.27
CDRT15-201ENST00000420162 ATP10AO60312 1499 aa22.99■■□□□ 1.27
CDRT15-201ENST00000420162 CROCC2H7BZ55 1655 aa22.98■■□□□ 1.27
CDRT15-201ENST00000420162 ITGAEP38570 1179 aa22.96■■□□□ 1.27
CDRT15-201ENST00000420162 CHIC2Q9UKJ5 165 aa22.95■■□□□ 1.26
CDRT15-201ENST00000420162 DIP2CQ9Y2E4 1556 aa22.95■■□□□ 1.26
CDRT15-201ENST00000420162 ABCA6Q8N139 1617 aa22.94■■□□□ 1.26
CDRT15-201ENST00000420162 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
CDRT15-201ENST00000420162 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
CDRT15-201ENST00000420162 REREQ9P2R6 1566 aa22.91■■□□□ 1.26
CDRT15-201ENST00000420162 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
CDRT15-201ENST00000420162 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
CDRT15-201ENST00000420162 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
CDRT15-201ENST00000420162 ROCK1Q13464 1354 aa22.9■■□□□ 1.26
CDRT15-201ENST00000420162 PLXNC1O60486 1568 aa22.9■■□□□ 1.26
CDRT15-201ENST00000420162 A2MP01023 1474 aa22.9■■□□□ 1.26
CDRT15-201ENST00000420162 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.26
CDRT15-201ENST00000420162 RRP7BPQ9NSQ0 103 aa22.89■■□□□ 1.25
CDRT15-201ENST00000420162 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
CDRT15-201ENST00000420162 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
CDRT15-201ENST00000420162 AGLP35573 1532 aa22.84■■□□□ 1.25
CDRT15-201ENST00000420162 DUOX2Q9NRD8 1548 aa22.84■■□□□ 1.25
CDRT15-201ENST00000420162 ERBINQ96RT1 1412 aa22.79■■□□□ 1.24
CDRT15-201ENST00000420162 KIF3BO15066 747 aa22.78■■□□□ 1.24
CDRT15-201ENST00000420162 SIGLEC1Q9BZZ2 1709 aa22.78■■□□□ 1.24
CDRT15-201ENST00000420162 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
CDRT15-201ENST00000420162 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
CDRT15-201ENST00000420162 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
CDRT15-201ENST00000420162 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
CDRT15-201ENST00000420162 MLECQ14165 292 aa22.74■■□□□ 1.23
CDRT15-201ENST00000420162 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
CDRT15-201ENST00000420162 HFM1A2PYH4 1435 aa22.74■■□□□ 1.23
CDRT15-201ENST00000420162 GGT6Q6P531 493 aa22.72■■□□□ 1.23
CDRT15-201ENST00000420162 NAIPQ13075 1403 aa22.72■■□□□ 1.23
CDRT15-201ENST00000420162 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
CDRT15-201ENST00000420162 ADAMTSL3P82987 1691 aa22.67■■□□□ 1.22
CDRT15-201ENST00000420162 GCC2Q8IWJ2 1684 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms