RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 POGZQ7Z3K3 1410 aa24.47■■□□□ 1.51
RARA-205ENST00000420042 ADAMTSL3P82987 1691 aa24.46■■□□□ 1.51
RARA-205ENST00000420042 ZFYVE16Q7Z3T8 1539 aa24.46■■□□□ 1.51
RARA-205ENST00000420042 LRRIQ1Q96JM4 1722 aa24.46■■□□□ 1.51
RARA-205ENST00000420042 PTPRMP28827 1452 aa24.45■■□□□ 1.51
RARA-205ENST00000420042 ARHGAP5Q13017 1502 aa24.45■■□□□ 1.5
RARA-205ENST00000420042 YEATS2Q9ULM3 1422 aa24.44■■□□□ 1.5
RARA-205ENST00000420042 BCORL1Q5H9F3 1711 aa24.44■■□□□ 1.5
RARA-205ENST00000420042 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
RARA-205ENST00000420042 MYT1LQ9UL68 1186 aa24.38■■□□□ 1.49
RARA-205ENST00000420042 MADDQ8WXG6 1647 aa24.38■■□□□ 1.49
RARA-205ENST00000420042 ZNF518AQ6AHZ1 1483 aa24.37■■□□□ 1.49
RARA-205ENST00000420042 MLECQ14165 292 aa24.36■■□□□ 1.49
RARA-205ENST00000420042 AFAP1Q8N556 730 aa24.36■■□□□ 1.49
RARA-205ENST00000420042 ATP10AO60312 1499 aa24.35■■□□□ 1.49
RARA-205ENST00000420042 C9orf84Q5VXU9 1444 aa24.31■■□□□ 1.48
RARA-205ENST00000420042 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
RARA-205ENST00000420042 PLPPR3Q6T4P5 718 aa24.3■■□□□ 1.48
RARA-205ENST00000420042 PREX2Q70Z35 1606 aa24.3■■□□□ 1.48
RARA-205ENST00000420042 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
RARA-205ENST00000420042 SIGLEC1Q9BZZ2 1709 aa24.27■■□□□ 1.48
RARA-205ENST00000420042 ZNF777Q9ULD5 760 aaPredicted RBP24.27■■□□□ 1.48
RARA-205ENST00000420042 KDM5CP41229 1560 aa24.27■■□□□ 1.48
RARA-205ENST00000420042 ABCC1P33527 1531 aa24.25■■□□□ 1.47
RARA-205ENST00000420042 MTUS2Q5JR59 1369 aa24.24■■□□□ 1.47
RARA-205ENST00000420042 CEP162Q5TB80 1403 aa24.24■■□□□ 1.47
RARA-205ENST00000420042 TRAPPC8Q9Y2L5 1435 aa24.24■■□□□ 1.47
RARA-205ENST00000420042 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
RARA-205ENST00000420042 ARHGEF12Q9NZN5 1544 aa24.23■■□□□ 1.47
RARA-205ENST00000420042 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
RARA-205ENST00000420042 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
RARA-205ENST00000420042 CCNB3Q8WWL7 1395 aa24.2■■□□□ 1.46
RARA-205ENST00000420042 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
RARA-205ENST00000420042 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
RARA-205ENST00000420042 DIP2CQ9Y2E4 1556 aa24.18■■□□□ 1.46
RARA-205ENST00000420042 FER1L4A9Z1Z3 1794 aa24.18■■□□□ 1.46
RARA-205ENST00000420042 LMTK3Q96Q04 1460 aa24.18■■□□□ 1.46
RARA-205ENST00000420042 ILDR1Q86SU0 546 aaPredicted RBP24.16■■□□□ 1.46
RARA-205ENST00000420042 HNRNPMP52272 730 aaKnown RBP eCLIP24.15■■□□□ 1.46
RARA-205ENST00000420042 ABCA6Q8N139 1617 aa24.13■■□□□ 1.45
RARA-205ENST00000420042 SAMD9LQ8IVG5 1584 aa24.13■■□□□ 1.45
RARA-205ENST00000420042 REREQ9P2R6 1566 aa24.13■■□□□ 1.45
RARA-205ENST00000420042 SYCP2Q9BX26 1530 aa24.12■■□□□ 1.45
RARA-205ENST00000420042 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
RARA-205ENST00000420042 PLEKHH2Q8IVE3 1493 aa24.12■■□□□ 1.45
RARA-205ENST00000420042 SPAG9O60271 1321 aaKnown RBP24.11■■□□□ 1.45
RARA-205ENST00000420042 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
RARA-205ENST00000420042 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
RARA-205ENST00000420042 KIAA1107Q9UPP5 1409 aa24.1■■□□□ 1.45
RARA-205ENST00000420042 HSPA2P54652 639 aa24.1■■□□□ 1.45
RARA-205ENST00000420042 EHBP1L1Q8N3D4 1523 aa24.1■■□□□ 1.45
RARA-205ENST00000420042 AGLP35573 1532 aa24.08■■□□□ 1.45
RARA-205ENST00000420042 KIDINS220Q9ULH0 1771 aa24.08■■□□□ 1.44
RARA-205ENST00000420042 ZNF644Q9H582 1327 aaPredicted RBP24.03■■□□□ 1.44
RARA-205ENST00000420042 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
RARA-205ENST00000420042 ATP7AQ04656 1500 aa24■■□□□ 1.43
RARA-205ENST00000420042 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
RARA-205ENST00000420042 NCOA2Q15596 1464 aa23.97■■□□□ 1.43
RARA-205ENST00000420042 CNTLNQ9NXG0 1405 aa23.97■■□□□ 1.43
RARA-205ENST00000420042 PREX1Q8TCU6 1659 aa23.96■■□□□ 1.43
RARA-205ENST00000420042 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.43
RARA-205ENST00000420042 A2MP01023 1474 aa23.95■■□□□ 1.42
RARA-205ENST00000420042 UHRF1BP1Q6BDS2 1440 aa23.95■■□□□ 1.42
RARA-205ENST00000420042 SUPT6HQ7KZ85 1726 aaKnown RBP23.95■■□□□ 1.42
RARA-205ENST00000420042 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
RARA-205ENST00000420042 RSPH4AQ5TD94 716 aa23.91■■□□□ 1.42
RARA-205ENST00000420042 GGT6Q6P531 493 aa23.91■■□□□ 1.42
RARA-205ENST00000420042 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
RARA-205ENST00000420042 C3P01024 1663 aa23.91■■□□□ 1.42
RARA-205ENST00000420042 RTEL1-TNFRSF6BF6WH68 1400 aa23.89■■□□□ 1.41
RARA-205ENST00000420042 PLXNC1O60486 1568 aa23.89■■□□□ 1.41
RARA-205ENST00000420042 LRRC9Q6ZRR7 1453 aa23.88■■□□□ 1.41
RARA-205ENST00000420042 ZMYM3Q14202 1370 aa23.88■■□□□ 1.41
RARA-205ENST00000420042 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
RARA-205ENST00000420042 SETD1BQ9UPS6 1966 aaKnown RBP23.87■■□□□ 1.41
RARA-205ENST00000420042 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
RARA-205ENST00000420042 CCDC141Q6ZP82 1450 aa23.86■■□□□ 1.41
RARA-205ENST00000420042 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
RARA-205ENST00000420042 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
RARA-205ENST00000420042 PPP6R1Q9UPN7 881 aa23.84■■□□□ 1.41
RARA-205ENST00000420042 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.41
RARA-205ENST00000420042 TSPY4P0CV99 314 aa23.83■■□□□ 1.41
RARA-205ENST00000420042 TSPY10P0CW01 314 aa23.83■■□□□ 1.41
RARA-205ENST00000420042 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
RARA-205ENST00000420042 NPATQ14207 1427 aa23.82■■□□□ 1.4
RARA-205ENST00000420042 MROH2AA6NES4 1674 aa23.82■■□□□ 1.4
RARA-205ENST00000420042 APLP2Q06481 763 aa23.81■■□□□ 1.4
RARA-205ENST00000420042 KIF3BO15066 747 aa23.78■■□□□ 1.4
RARA-205ENST00000420042 CLTCQ00610 1675 aaKnown RBP23.78■■□□□ 1.4
RARA-205ENST00000420042 CERKQ8TCT0 537 aa23.76■■□□□ 1.39
RARA-205ENST00000420042 ARHGEF5Q12774 1597 aa23.76■■□□□ 1.39
RARA-205ENST00000420042 STRCQ7RTU9 1775 aa23.74■■□□□ 1.39
RARA-205ENST00000420042 PTPRKQ15262 1439 aa23.73■■□□□ 1.39
RARA-205ENST00000420042 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
RARA-205ENST00000420042 MIA2Q96PC5 1412 aa23.72■■□□□ 1.39
RARA-205ENST00000420042 PTPRTO14522 1441 aa23.7■■□□□ 1.38
RARA-205ENST00000420042 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
RARA-205ENST00000420042 NCOA1Q15788 1441 aa23.68■■□□□ 1.38
RARA-205ENST00000420042 CAMSAP1Q5T5Y3 1602 aa23.66■■□□□ 1.38
RARA-205ENST00000420042 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms