RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
CTSA-205ENST00000419493 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
CTSA-205ENST00000419493 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
CTSA-205ENST00000419493 RICTORQ6R327 1708 aa15.32■□□□□ 0.04
CTSA-205ENST00000419493 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
CTSA-205ENST00000419493 POGZQ7Z3K3 1410 aa15.3■□□□□ 0.04
CTSA-205ENST00000419493 CCNB3Q8WWL7 1395 aa15.29■□□□□ 0.04
CTSA-205ENST00000419493 CFDP1Q9UEE9 299 aaPredicted RBP15.29■□□□□ 0.04
CTSA-205ENST00000419493 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
CTSA-205ENST00000419493 YEATS2Q9ULM3 1422 aa15.28■□□□□ 0.04
CTSA-205ENST00000419493 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
CTSA-205ENST00000419493 ZFYVE16Q7Z3T8 1539 aa15.27■□□□□ 0.04
CTSA-205ENST00000419493 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.04
CTSA-205ENST00000419493 MLECQ14165 292 aa15.27■□□□□ 0.04
CTSA-205ENST00000419493 ZNF518AQ6AHZ1 1483 aa15.27■□□□□ 0.03
CTSA-205ENST00000419493 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
CTSA-205ENST00000419493 ZMYM4Q5VZL5 1548 aa15.26■□□□□ 0.03
CTSA-205ENST00000419493 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
CTSA-205ENST00000419493 HNRNPMP52272 730 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTSA-205ENST00000419493 APLP2Q06481 763 aa15.25■□□□□ 0.03
CTSA-205ENST00000419493 ARHGEF40Q8TER5 1519 aa15.25■□□□□ 0.03
CTSA-205ENST00000419493 GPATCH8Q9UKJ3 1502 aaKnown RBP15.25■□□□□ 0.03
CTSA-205ENST00000419493 EHBP1L1Q8N3D4 1523 aa15.23■□□□□ 0.03
CTSA-205ENST00000419493 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
CTSA-205ENST00000419493 ATP10AO60312 1499 aa15.22■□□□□ 0.03
CTSA-205ENST00000419493 TRAPPC8Q9Y2L5 1435 aa15.22■□□□□ 0.03
CTSA-205ENST00000419493 ARHGEF12Q9NZN5 1544 aa15.21■□□□□ 0.03
CTSA-205ENST00000419493 ABCC1P33527 1531 aa15.2■□□□□ 0.02
CTSA-205ENST00000419493 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
CTSA-205ENST00000419493 C9orf84Q5VXU9 1444 aa15.19■□□□□ 0.02
CTSA-205ENST00000419493 BCORL1Q5H9F3 1711 aa15.19■□□□□ 0.02
CTSA-205ENST00000419493 KDM5CP41229 1560 aa15.18■□□□□ 0.02
CTSA-205ENST00000419493 SAMD9LQ8IVG5 1584 aa15.18■□□□□ 0.02
CTSA-205ENST00000419493 HECW2Q9P2P5 1572 aa15.18■□□□□ 0.02
CTSA-205ENST00000419493 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
CTSA-205ENST00000419493 ITSN2Q9NZM3 1697 aa15.18■□□□□ 0.02
CTSA-205ENST00000419493 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
CTSA-205ENST00000419493 ZNF644Q9H582 1327 aaPredicted RBP15.17■□□□□ 0.02
CTSA-205ENST00000419493 PTPRMP28827 1452 aa15.17■□□□□ 0.02
CTSA-205ENST00000419493 NCOA2Q15596 1464 aa15.17■□□□□ 0.02
CTSA-205ENST00000419493 PLEKHH2Q8IVE3 1493 aa15.17■□□□□ 0.02
CTSA-205ENST00000419493 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
CTSA-205ENST00000419493 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
CTSA-205ENST00000419493 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
CTSA-205ENST00000419493 MLH3Q9UHC1 1453 aa15.16■□□□□ 0.02
CTSA-205ENST00000419493 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
CTSA-205ENST00000419493 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
CTSA-205ENST00000419493 MADDQ8WXG6 1647 aa15.15■□□□□ 0.02
CTSA-205ENST00000419493 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
CTSA-205ENST00000419493 SIGLEC1Q9BZZ2 1709 aa15.13■□□□□ 0.01
CTSA-205ENST00000419493 RIMS1Q86UR5 1692 aaKnown RBP15.12■□□□□ 0.01
CTSA-205ENST00000419493 DIP2CQ9Y2E4 1556 aa15.12■□□□□ 0.01
CTSA-205ENST00000419493 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
CTSA-205ENST00000419493 ABCA6Q8N139 1617 aa15.1■□□□□ 0.01
CTSA-205ENST00000419493 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
CTSA-205ENST00000419493 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
CTSA-205ENST00000419493 TSPY4P0CV99 314 aa15.08■□□□□ 0
CTSA-205ENST00000419493 TSPY10P0CW01 314 aa15.08■□□□□ 0
CTSA-205ENST00000419493 ATP7AQ04656 1500 aa15.07■□□□□ 0
CTSA-205ENST00000419493 FER1L4A9Z1Z3 1794 aa15.07■□□□□ 0
CTSA-205ENST00000419493 CEBPAP49715 358 aaPredicted RBP15.07■□□□□ 0
CTSA-205ENST00000419493 CAMSAP2Q08AD1 1489 aa15.07■□□□□ 0
CTSA-205ENST00000419493 MBD5Q9P267 1494 aa15.06■□□□□ 0
CTSA-205ENST00000419493 REREQ9P2R6 1566 aa15.06■□□□□ 0
CTSA-205ENST00000419493 GGT6Q6P531 493 aa15.05■□□□□ -0
CTSA-205ENST00000419493 AGLP35573 1532 aa15.03■□□□□ -0
CTSA-205ENST00000419493 A2MP01023 1474 aa15.03■□□□□ -0
CTSA-205ENST00000419493 CCDC141Q6ZP82 1450 aa15.03■□□□□ -0
CTSA-205ENST00000419493 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
CTSA-205ENST00000419493 RTEL1-TNFRSF6BF6WH68 1400 aa15.02■□□□□ -0
CTSA-205ENST00000419493 INO80Q9ULG1 1556 aaPredicted RBP15.02□□□□□ -0.01
CTSA-205ENST00000419493 MIA2Q96PC5 1412 aa15□□□□□ -0.01
CTSA-205ENST00000419493 KIF3BO15066 747 aa14.99□□□□□ -0.01
CTSA-205ENST00000419493 HSPA2P54652 639 aa14.99□□□□□ -0.01
CTSA-205ENST00000419493 DHX29Q7Z478 1369 aaKnown RBP14.98□□□□□ -0.01
CTSA-205ENST00000419493 ADGBQ8N7X0 1667 aa14.98□□□□□ -0.01
CTSA-205ENST00000419493 CNTLNQ9NXG0 1405 aa14.97□□□□□ -0.01
CTSA-205ENST00000419493 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
CTSA-205ENST00000419493 LMTK3Q96Q04 1460 aa14.96□□□□□ -0.01
CTSA-205ENST00000419493 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
CTSA-205ENST00000419493 FAM50AQ14320 339 aaKnown RBP14.94□□□□□ -0.02
CTSA-205ENST00000419493 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
CTSA-205ENST00000419493 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
CTSA-205ENST00000419493 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
CTSA-205ENST00000419493 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
CTSA-205ENST00000419493 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
CTSA-205ENST00000419493 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
CTSA-205ENST00000419493 C3P01024 1663 aa14.92□□□□□ -0.02
CTSA-205ENST00000419493 WASHC2CQ9Y4E1 1318 aa14.92□□□□□ -0.02
CTSA-205ENST00000419493 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
CTSA-205ENST00000419493 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
CTSA-205ENST00000419493 SETD1BQ9UPS6 1966 aaKnown RBP14.91□□□□□ -0.02
CTSA-205ENST00000419493 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
CTSA-205ENST00000419493 PREX1Q8TCU6 1659 aa14.9□□□□□ -0.02
CTSA-205ENST00000419493 ABCC5O15440 1437 aa14.88□□□□□ -0.03
CTSA-205ENST00000419493 MAST1Q9Y2H9 1570 aa14.88□□□□□ -0.03
CTSA-205ENST00000419493 DAPK1P53355 1430 aa14.87□□□□□ -0.03
CTSA-205ENST00000419493 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
CTSA-205ENST00000419493 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
CTSA-205ENST00000419493 NPATQ14207 1427 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms