RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 ARHGAP5Q13017 1502 aa25.34■■□□□ 1.65
NDUFA3-206ENST00000419113 MYOM3Q5VTT5 1437 aa25.33■■□□□ 1.65
NDUFA3-206ENST00000419113 NEO1Q92859 1461 aa25.32■■□□□ 1.64
NDUFA3-206ENST00000419113 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
NDUFA3-206ENST00000419113 EFCAB2Q5VUJ9 269 aa25.31■■□□□ 1.64
NDUFA3-206ENST00000419113 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
NDUFA3-206ENST00000419113 FANCAO15360 1455 aa25.31■■□□□ 1.64
NDUFA3-206ENST00000419113 MIA2Q96PC5 1412 aa25.3■■□□□ 1.64
NDUFA3-206ENST00000419113 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
NDUFA3-206ENST00000419113 PLEKHH2Q8IVE3 1493 aa25.24■■□□□ 1.63
NDUFA3-206ENST00000419113 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
NDUFA3-206ENST00000419113 AKNAQ7Z591 1439 aa25.22■■□□□ 1.63
NDUFA3-206ENST00000419113 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
NDUFA3-206ENST00000419113 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.62
NDUFA3-206ENST00000419113 ADGRL1O94910 1474 aa25.19■■□□□ 1.62
NDUFA3-206ENST00000419113 ABCC1P33527 1531 aa25.18■■□□□ 1.62
NDUFA3-206ENST00000419113 ZNF777Q9ULD5 760 aaPredicted RBP25.18■■□□□ 1.62
NDUFA3-206ENST00000419113 CAMSAP2Q08AD1 1489 aa25.17■■□□□ 1.62
NDUFA3-206ENST00000419113 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
NDUFA3-206ENST00000419113 TCOF1Q13428 1488 aaKnown RBP25.16■■□□□ 1.62
NDUFA3-206ENST00000419113 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
NDUFA3-206ENST00000419113 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
NDUFA3-206ENST00000419113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.12■■□□□ 1.612e-6■■■■□ 19.8
NDUFA3-206ENST00000419113 DENND4BO75064 1496 aaPredicted RBP25.12■■□□□ 1.61
NDUFA3-206ENST00000419113 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
NDUFA3-206ENST00000419113 RSPH4AQ5TD94 716 aa25.11■■□□□ 1.61
NDUFA3-206ENST00000419113 KDM6BO15054 1643 aa25.11■■□□□ 1.61
NDUFA3-206ENST00000419113 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
NDUFA3-206ENST00000419113 ZNF644Q9H582 1327 aaPredicted RBP25.09■■□□□ 1.61
NDUFA3-206ENST00000419113 ZNF518AQ6AHZ1 1483 aa25.08■■□□□ 1.6
NDUFA3-206ENST00000419113 RICTORQ6R327 1708 aa25.07■■□□□ 1.6
NDUFA3-206ENST00000419113 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
NDUFA3-206ENST00000419113 ARHGEF12Q9NZN5 1544 aa25.06■■□□□ 1.6
NDUFA3-206ENST00000419113 MBD5Q9P267 1494 aa25.05■■□□□ 1.6
NDUFA3-206ENST00000419113 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
NDUFA3-206ENST00000419113 CCDC141Q6ZP82 1450 aa25.04■■□□□ 1.6
NDUFA3-206ENST00000419113 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.6
NDUFA3-206ENST00000419113 DNMT1P26358 1616 aaKnown RBP25.04■■□□□ 1.6
NDUFA3-206ENST00000419113 KDM5CP41229 1560 aa25.01■■□□□ 1.59
NDUFA3-206ENST00000419113 TRAPPC8Q9Y2L5 1435 aa25.01■■□□□ 1.59
NDUFA3-206ENST00000419113 COL17A1Q9UMD9 1497 aaPredicted RBP25.01■■□□□ 1.59
NDUFA3-206ENST00000419113 FRMPD1Q5SYB0 1578 aa25.01■■□□□ 1.59
NDUFA3-206ENST00000419113 ZMYM4Q5VZL5 1548 aa25■■□□□ 1.59
NDUFA3-206ENST00000419113 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
NDUFA3-206ENST00000419113 SHANK2Q9UPX8 1470 aa24.97■■□□□ 1.59
NDUFA3-206ENST00000419113 DAPK1P53355 1430 aa24.97■■□□□ 1.59
NDUFA3-206ENST00000419113 RAPGEF3O95398 923 aa24.97■■□□□ 1.59
NDUFA3-206ENST00000419113 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
NDUFA3-206ENST00000419113 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
NDUFA3-206ENST00000419113 MAGI2Q86UL8 1455 aa24.96■■□□□ 1.59
NDUFA3-206ENST00000419113 HECW2Q9P2P5 1572 aa24.96■■□□□ 1.59
NDUFA3-206ENST00000419113 MAST1Q9Y2H9 1570 aa24.96■■□□□ 1.59
NDUFA3-206ENST00000419113 AFAP1Q8N556 730 aa24.95■■□□□ 1.58
NDUFA3-206ENST00000419113 MLH3Q9UHC1 1453 aa24.95■■□□□ 1.58
NDUFA3-206ENST00000419113 ABCC5O15440 1437 aa24.95■■□□□ 1.58
NDUFA3-206ENST00000419113 RTEL1-TNFRSF6BF6WH68 1400 aa24.94■■□□□ 1.58
NDUFA3-206ENST00000419113 SPAG9O60271 1321 aaKnown RBP24.93■■□□□ 1.58
NDUFA3-206ENST00000419113 INO80Q9ULG1 1556 aaPredicted RBP24.93■■□□□ 1.58
NDUFA3-206ENST00000419113 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
NDUFA3-206ENST00000419113 C9orf84Q5VXU9 1444 aa24.9■■□□□ 1.58
NDUFA3-206ENST00000419113 ADGBQ8N7X0 1667 aa24.9■■□□□ 1.58
NDUFA3-206ENST00000419113 KIDINS220Q9ULH0 1771 aa24.9■■□□□ 1.58
NDUFA3-206ENST00000419113 ZFYVE16Q7Z3T8 1539 aa24.89■■□□□ 1.57
NDUFA3-206ENST00000419113 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
NDUFA3-206ENST00000419113 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
NDUFA3-206ENST00000419113 ARHGEF40Q8TER5 1519 aa24.85■■□□□ 1.57
NDUFA3-206ENST00000419113 ADGRL2O95490 1459 aa24.84■■□□□ 1.57
NDUFA3-206ENST00000419113 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.57
NDUFA3-206ENST00000419113 ITGAEP38570 1179 aa24.83■■□□□ 1.57
NDUFA3-206ENST00000419113 TRIM26Q12899 539 aaPredicted RBP24.82■■□□□ 1.56
NDUFA3-206ENST00000419113 ROCK1Q13464 1354 aa24.81■■□□□ 1.56
NDUFA3-206ENST00000419113 ABCA6Q8N139 1617 aa24.81■■□□□ 1.56
NDUFA3-206ENST00000419113 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
NDUFA3-206ENST00000419113 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
NDUFA3-206ENST00000419113 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
NDUFA3-206ENST00000419113 CHIC2Q9UKJ5 165 aa24.78■■□□□ 1.56
NDUFA3-206ENST00000419113 REREQ9P2R6 1566 aa24.78■■□□□ 1.56
NDUFA3-206ENST00000419113 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
NDUFA3-206ENST00000419113 ATP10AO60312 1499 aa24.77■■□□□ 1.56
NDUFA3-206ENST00000419113 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
NDUFA3-206ENST00000419113 KIF15Q9NS87 1388 aa24.74■■□□□ 1.55
NDUFA3-206ENST00000419113 A2MP01023 1474 aa24.73■■□□□ 1.55
NDUFA3-206ENST00000419113 DHX29Q7Z478 1369 aaKnown RBP24.7■■□□□ 1.55
NDUFA3-206ENST00000419113 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
NDUFA3-206ENST00000419113 RRP7BPQ9NSQ0 103 aa24.7■■□□□ 1.54
NDUFA3-206ENST00000419113 ERBINQ96RT1 1412 aa24.69■■□□□ 1.54
NDUFA3-206ENST00000419113 EIF2AK4Q9P2K8 1649 aaKnown RBP24.68■■□□□ 1.54
NDUFA3-206ENST00000419113 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
NDUFA3-206ENST00000419113 AGLP35573 1532 aa24.67■■□□□ 1.54
NDUFA3-206ENST00000419113 BCORL1Q5H9F3 1711 aa24.66■■□□□ 1.54
NDUFA3-206ENST00000419113 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
NDUFA3-206ENST00000419113 NAIPQ13075 1403 aa24.63■■□□□ 1.53
NDUFA3-206ENST00000419113 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
NDUFA3-206ENST00000419113 SIGLEC1Q9BZZ2 1709 aa24.58■■□□□ 1.52
NDUFA3-206ENST00000419113 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
NDUFA3-206ENST00000419113 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
NDUFA3-206ENST00000419113 RNF17Q9BXT8 1623 aaKnown RBP24.56■■□□□ 1.52
NDUFA3-206ENST00000419113 KIF3BO15066 747 aa24.55■■□□□ 1.52
NDUFA3-206ENST00000419113 DEPDC5O75140 1603 aa24.54■■□□□ 1.52
NDUFA3-206ENST00000419113 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms