RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
VPS45-203ENST00000419023 PDE4AP27815 886 aa12.24□□□□□ -0.45
VPS45-203ENST00000419023 TMEM92Q6UXU6 159 aa12.24□□□□□ -0.45
VPS45-203ENST00000419023 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
VPS45-203ENST00000419023 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
VPS45-203ENST00000419023 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
VPS45-203ENST00000419023 LHX8Q68G74 356 aa12.22□□□□□ -0.45
VPS45-203ENST00000419023 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
VPS45-203ENST00000419023 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
VPS45-203ENST00000419023 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
VPS45-203ENST00000419023 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
VPS45-203ENST00000419023 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
VPS45-203ENST00000419023 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
VPS45-203ENST00000419023 KIF3CO14782 793 aa12.18□□□□□ -0.46
VPS45-203ENST00000419023 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
VPS45-203ENST00000419023 MFSD10Q14728 455 aa12.16□□□□□ -0.46
VPS45-203ENST00000419023 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
VPS45-203ENST00000419023 DSG2Q14126 1118 aa12.14□□□□□ -0.47
VPS45-203ENST00000419023 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
VPS45-203ENST00000419023 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
VPS45-203ENST00000419023 FOXK1P85037 733 aa12.12□□□□□ -0.47
VPS45-203ENST00000419023 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
VPS45-203ENST00000419023 E2F4Q16254 413 aa12.06□□□□□ -0.48
VPS45-203ENST00000419023 CAMK2BQ13554 666 aa12.02□□□□□ -0.49
VPS45-203ENST00000419023 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
VPS45-203ENST00000419023 P3H3Q8IVL6 736 aa12□□□□□ -0.49
VPS45-203ENST00000419023 ABCC9O60706 1549 aa12□□□□□ -0.49
VPS45-203ENST00000419023 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
VPS45-203ENST00000419023 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS45-203ENST00000419023 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
VPS45-203ENST00000419023 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
VPS45-203ENST00000419023 SLC34A2O95436 690 aa11.93□□□□□ -0.5
VPS45-203ENST00000419023 DPYSL4O14531 572 aa11.92□□□□□ -0.5
VPS45-203ENST00000419023 SNPHO15079 494 aa11.92□□□□□ -0.5
VPS45-203ENST00000419023 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
VPS45-203ENST00000419023 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
VPS45-203ENST00000419023 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
VPS45-203ENST00000419023 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
VPS45-203ENST00000419023 ZNF710Q8N1W2 664 aa11.89□□□□□ -0.51
VPS45-203ENST00000419023 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
VPS45-203ENST00000419023 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
VPS45-203ENST00000419023 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
VPS45-203ENST00000419023 TBC1D12O60347 775 aa11.88□□□□□ -0.51
VPS45-203ENST00000419023 ARSIQ5FYB1 569 aa11.85□□□□□ -0.51
VPS45-203ENST00000419023 KHSRPQ92945 711 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■■□ 23
VPS45-203ENST00000419023 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
VPS45-203ENST00000419023 NBR1Q14596 966 aa11.83□□□□□ -0.52
VPS45-203ENST00000419023 GPR153Q6NV75 609 aa11.83□□□□□ -0.52
VPS45-203ENST00000419023 EVI5O60447 810 aa11.82□□□□□ -0.52
VPS45-203ENST00000419023 PDIA6Q15084 440 aa11.81□□□□□ -0.52
VPS45-203ENST00000419023 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
VPS45-203ENST00000419023 NUDT7P0C024 238 aa11.8□□□□□ -0.52
VPS45-203ENST00000419023 BCANQ96GW7 911 aa11.8□□□□□ -0.52
VPS45-203ENST00000419023 SEMA3EO15041 775 aa11.79□□□□□ -0.52
VPS45-203ENST00000419023 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
VPS45-203ENST00000419023 ST18O60284 1047 aa11.78□□□□□ -0.52
VPS45-203ENST00000419023 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
VPS45-203ENST00000419023 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
VPS45-203ENST00000419023 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
VPS45-203ENST00000419023 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
VPS45-203ENST00000419023 MLLT3P42568 568 aaPredicted RBP11.73□□□□□ -0.53
VPS45-203ENST00000419023 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.53
VPS45-203ENST00000419023 DDX12PQ92771 950 aa11.71□□□□□ -0.53
VPS45-203ENST00000419023 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
VPS45-203ENST00000419023 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
VPS45-203ENST00000419023 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
VPS45-203ENST00000419023 PTGER2P43116 358 aa11.69□□□□□ -0.54
VPS45-203ENST00000419023 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
VPS45-203ENST00000419023 EMP3P54852 163 aa11.66□□□□□ -0.54
VPS45-203ENST00000419023 CCDC180Q9P1Z9 1646 aa11.65□□□□□ -0.54
VPS45-203ENST00000419023 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.54
VPS45-203ENST00000419023 PHF14O94880 888 aa11.64□□□□□ -0.55
VPS45-203ENST00000419023 ZNF454Q8N9F8 522 aa11.64□□□□□ -0.55
VPS45-203ENST00000419023 ERBB3P21860 1342 aa11.63□□□□□ -0.55
VPS45-203ENST00000419023 FOSBP53539 338 aa11.63□□□□□ -0.55
VPS45-203ENST00000419023 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
VPS45-203ENST00000419023 PCDHGA10Q9Y5H3 936 aa11.63□□□□□ -0.55
VPS45-203ENST00000419023 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
VPS45-203ENST00000419023 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
VPS45-203ENST00000419023 OSBPP22059 807 aa11.61□□□□□ -0.55
VPS45-203ENST00000419023 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
VPS45-203ENST00000419023 EPAS1Q99814 870 aa11.6□□□□□ -0.55
VPS45-203ENST00000419023 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
VPS45-203ENST00000419023 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
VPS45-203ENST00000419023 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
VPS45-203ENST00000419023 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
VPS45-203ENST00000419023 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
VPS45-203ENST00000419023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.58□□□□□ -0.56
VPS45-203ENST00000419023 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
VPS45-203ENST00000419023 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
VPS45-203ENST00000419023 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
VPS45-203ENST00000419023 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
VPS45-203ENST00000419023 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
VPS45-203ENST00000419023 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
VPS45-203ENST00000419023 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
VPS45-203ENST00000419023 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
VPS45-203ENST00000419023 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
VPS45-203ENST00000419023 MAP3K7O43318 606 aa11.54□□□□□ -0.56
VPS45-203ENST00000419023 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
VPS45-203ENST00000419023 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms