RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 SCAPERQ9BY12 1400 aa41.51■■■■■ 4.24
CAPN7-203ENST00000418994 MTUS2Q5JR59 1369 aa41.5■■■■■ 4.23
CAPN7-203ENST00000418994 PREX2Q70Z35 1606 aa41.48■■■■■ 4.23
CAPN7-203ENST00000418994 CDC42BPBQ9Y5S2 1711 aa41.47■■■■■ 4.23
CAPN7-203ENST00000418994 POGZQ7Z3K3 1410 aa41.44■■■■■ 4.22
CAPN7-203ENST00000418994 ZMYM4Q5VZL5 1548 aa41.42■■■■■ 4.22
CAPN7-203ENST00000418994 CDC42BPAQ5VT25 1732 aa41.41■■■■■ 4.22
CAPN7-203ENST00000418994 EHBP1L1Q8N3D4 1523 aa41.41■■■■■ 4.22
CAPN7-203ENST00000418994 ARHGEF40Q8TER5 1519 aa41.36■■■■■ 4.21
CAPN7-203ENST00000418994 GPATCH8Q9UKJ3 1502 aaKnown RBP41.35■■■■■ 4.21
CAPN7-203ENST00000418994 MAGI2Q86UL8 1455 aa41.33■■■■■ 4.21
CAPN7-203ENST00000418994 TIAM1Q13009 1591 aa41.33■■■■■ 4.21
CAPN7-203ENST00000418994 CCNB3Q8WWL7 1395 aa41.32■■■■■ 4.21
CAPN7-203ENST00000418994 ZFYVE16Q7Z3T8 1539 aa41.3■■■■■ 4.2
CAPN7-203ENST00000418994 ZNF518AQ6AHZ1 1483 aa41.3■■■■■ 4.2
CAPN7-203ENST00000418994 ABCC1P33527 1531 aa41.28■■■■■ 4.2
CAPN7-203ENST00000418994 YEATS2Q9ULM3 1422 aa41.26■■■■■ 4.19
CAPN7-203ENST00000418994 AFAP1Q8N556 730 aa41.23■■■■■ 4.19
CAPN7-203ENST00000418994 ZNF777Q9ULD5 760 aaPredicted RBP41.23■■■■■ 4.19
CAPN7-203ENST00000418994 KDM5CP41229 1560 aa41.22■■■■■ 4.19
CAPN7-203ENST00000418994 CFDP1Q9UEE9 299 aaPredicted RBP41.22■■■■■ 4.19
CAPN7-203ENST00000418994 ARHGEF12Q9NZN5 1544 aa41.22■■■■■ 4.19
CAPN7-203ENST00000418994 ITSN2Q9NZM3 1697 aa41.2■■■■■ 4.19
CAPN7-203ENST00000418994 MAP3K1Q13233 1512 aa41.2■■■■■ 4.19
CAPN7-203ENST00000418994 SAMD9LQ8IVG5 1584 aa41.2■■■■■ 4.19
CAPN7-203ENST00000418994 SUPT6HQ7KZ85 1726 aaKnown RBP41.18■■■■■ 4.18
CAPN7-203ENST00000418994 ARID4BQ4LE39 1312 aaPredicted RBP41.18■■■■■ 4.18
CAPN7-203ENST00000418994 TRAPPC8Q9Y2L5 1435 aa41.17■■■■■ 4.18
CAPN7-203ENST00000418994 LRRC9Q6ZRR7 1453 aa41.16■■■■■ 4.18
CAPN7-203ENST00000418994 NCOA2Q15596 1464 aa41.15■■■■■ 4.18
CAPN7-203ENST00000418994 HECW2Q9P2P5 1572 aa41.12■■■■■ 4.17
CAPN7-203ENST00000418994 PLEKHH2Q8IVE3 1493 aa41.11■■■■■ 4.17
CAPN7-203ENST00000418994 SYCP2Q9BX26 1530 aa41.1■■■■■ 4.17
CAPN7-203ENST00000418994 KIAA1107Q9UPP5 1409 aa41.1■■■■■ 4.17
CAPN7-203ENST00000418994 ATP10AO60312 1499 aa41.09■■■■■ 4.17
CAPN7-203ENST00000418994 MLH3Q9UHC1 1453 aa41.09■■■■■ 4.17
CAPN7-203ENST00000418994 BCORL1Q5H9F3 1711 aa41.08■■■■■ 4.17
CAPN7-203ENST00000418994 MYT1LQ9UL68 1186 aa41.08■■■■■ 4.17
CAPN7-203ENST00000418994 ADAMTSL3P82987 1691 aa41.06■■■■■ 4.16
CAPN7-203ENST00000418994 C9orf84Q5VXU9 1444 aa41.05■■■■■ 4.16
CAPN7-203ENST00000418994 HNRNPMP52272 730 aaKnown RBP eCLIP41.05■■■■■ 4.16
CAPN7-203ENST00000418994 KANK4Q5T7N3 995 aaPredicted RBP41.05■■■■■ 4.16
CAPN7-203ENST00000418994 APLP2Q06481 763 aa41.03■■■■■ 4.16
CAPN7-203ENST00000418994 SIGLEC1Q9BZZ2 1709 aa41.02■■■■■ 4.16
CAPN7-203ENST00000418994 ZNF644Q9H582 1327 aaPredicted RBP40.99■■■■■ 4.15
CAPN7-203ENST00000418994 DIP2CQ9Y2E4 1556 aa40.99■■■■■ 4.15
CAPN7-203ENST00000418994 ABCA6Q8N139 1617 aa40.96■■■■■ 4.15
CAPN7-203ENST00000418994 KIDINS220Q9ULH0 1771 aa40.94■■■■■ 4.14
CAPN7-203ENST00000418994 MADDQ8WXG6 1647 aa40.93■■■■■ 4.14
CAPN7-203ENST00000418994 SPAG9O60271 1321 aaKnown RBP40.93■■■■■ 4.14
CAPN7-203ENST00000418994 REREQ9P2R6 1566 aa40.91■■■■■ 4.14
CAPN7-203ENST00000418994 MBD5Q9P267 1494 aa40.89■■■■■ 4.14
CAPN7-203ENST00000418994 PTPRMP28827 1452 aa40.88■■■■■ 4.13
CAPN7-203ENST00000418994 CAMSAP2Q08AD1 1489 aa40.87■■■■■ 4.13
CAPN7-203ENST00000418994 MLECQ14165 292 aa40.86■■■■■ 4.13
CAPN7-203ENST00000418994 ATP7AQ04656 1500 aa40.83■■■■■ 4.13
CAPN7-203ENST00000418994 INO80Q9ULG1 1556 aaPredicted RBP40.82■■■■■ 4.13
CAPN7-203ENST00000418994 MYOM3Q5VTT5 1437 aa40.8■■■■■ 4.12
CAPN7-203ENST00000418994 RIMS1Q86UR5 1692 aaKnown RBP40.79■■■■■ 4.12
CAPN7-203ENST00000418994 AGLP35573 1532 aa40.77■■■■■ 4.12
CAPN7-203ENST00000418994 CCDC141Q6ZP82 1450 aa40.76■■■■■ 4.12
CAPN7-203ENST00000418994 MIA2Q96PC5 1412 aa40.76■■■■■ 4.11
CAPN7-203ENST00000418994 RSPH4AQ5TD94 716 aa40.75■■■■■ 4.11
CAPN7-203ENST00000418994 FER1L4A9Z1Z3 1794 aa40.73■■■■■ 4.11
CAPN7-203ENST00000418994 RTEL1-TNFRSF6BF6WH68 1400 aa40.7■■■■■ 4.11
CAPN7-203ENST00000418994 ARHGEF5Q12774 1597 aa40.69■■■■■ 4.11
CAPN7-203ENST00000418994 A2MP01023 1474 aa40.66■■■■■ 4.1
CAPN7-203ENST00000418994 PLXNC1O60486 1568 aa40.62■■■■■ 4.09
CAPN7-203ENST00000418994 ADGBQ8N7X0 1667 aa40.62■■■■■ 4.09
CAPN7-203ENST00000418994 TSPY4P0CV99 314 aa40.59■■■■■ 4.09
CAPN7-203ENST00000418994 TSPY10P0CW01 314 aa40.59■■■■■ 4.09
CAPN7-203ENST00000418994 PLPPR3Q6T4P5 718 aa40.57■■■■■ 4.09
CAPN7-203ENST00000418994 PTPN23Q9H3S7 1636 aa40.53■■■■■ 4.08
CAPN7-203ENST00000418994 FGD6Q6ZV73 1430 aa40.53■■■■■ 4.08
CAPN7-203ENST00000418994 ESF1Q9H501 851 aaKnown RBP40.51■■■■■ 4.08
CAPN7-203ENST00000418994 DHX29Q7Z478 1369 aaKnown RBP40.5■■■■■ 4.07
CAPN7-203ENST00000418994 MAST1Q9Y2H9 1570 aa40.48■■■■■ 4.07
CAPN7-203ENST00000418994 TCOF1Q13428 1488 aaKnown RBP40.45■■■■■ 4.07
CAPN7-203ENST00000418994 CNTLNQ9NXG0 1405 aa40.44■■■■■ 4.06
CAPN7-203ENST00000418994 CEBPAP49715 358 aaPredicted RBP40.43■■■■■ 4.06
CAPN7-203ENST00000418994 GGT6Q6P531 493 aa40.39■■■■■ 4.06
CAPN7-203ENST00000418994 ABCC5O15440 1437 aa40.38■■■■■ 4.05
CAPN7-203ENST00000418994 LMTK3Q96Q04 1460 aa40.37■■■■■ 4.05
CAPN7-203ENST00000418994 C3P01024 1663 aa40.35■■■■■ 4.05
CAPN7-203ENST00000418994 SHANK2Q9UPX8 1470 aa40.35■■■■■ 4.05
CAPN7-203ENST00000418994 CROCC2H7BZ55 1655 aa40.34■■■■■ 4.05
CAPN7-203ENST00000418994 DAPK1P53355 1430 aa40.33■■■■■ 4.05
CAPN7-203ENST00000418994 KIF3BO15066 747 aa40.33■■■■■ 4.05
CAPN7-203ENST00000418994 PPP6R1Q9UPN7 881 aa40.33■■■■■ 4.05
CAPN7-203ENST00000418994 DNMT1P26358 1616 aaKnown RBP40.33■■■■■ 4.05
CAPN7-203ENST00000418994 MROH2AA6NES4 1674 aa40.31■■■■■ 4.04
CAPN7-203ENST00000418994 CLTCQ00610 1675 aaKnown RBP40.27■■■■■ 4.04
CAPN7-203ENST00000418994 ZMYM3Q14202 1370 aa40.26■■■■■ 4.04
CAPN7-203ENST00000418994 FAM50AQ14320 339 aaKnown RBP40.25■■■■■ 4.03
CAPN7-203ENST00000418994 PREX1Q8TCU6 1659 aa40.24■■■■■ 4.03
CAPN7-203ENST00000418994 PPARGC1BQ86YN6 1023 aaKnown RBP40.23■■■■■ 4.03
CAPN7-203ENST00000418994 SETD1BQ9UPS6 1966 aaKnown RBP40.22■■■■■ 4.03
CAPN7-203ENST00000418994 DUOX2Q9NRD8 1548 aa40.21■■■■■ 4.03
CAPN7-203ENST00000418994 KIF15Q9NS87 1388 aa40.2■■■■■ 4.03
CAPN7-203ENST00000418994 FAM135AQ9P2D6 1515 aa40.17■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms