RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 NUDCQ9Y266 331 aa15.05■□□□□ -0
SHROOM2-202ENST00000418909 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
SHROOM2-202ENST00000418909 CUX1P39880 1505 aa15.03■□□□□ -0
SHROOM2-202ENST00000418909 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
SHROOM2-202ENST00000418909 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
SHROOM2-202ENST00000418909 TOP2BQ02880 1626 aa15.01□□□□□ -0.01
SHROOM2-202ENST00000418909 SYNJ1O43426 1573 aa15□□□□□ -0.01
SHROOM2-202ENST00000418909 FOXD1Q16676 465 aa15□□□□□ -0.01
SHROOM2-202ENST00000418909 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
SHROOM2-202ENST00000418909 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
SHROOM2-202ENST00000418909 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
SHROOM2-202ENST00000418909 HDGFL2Q7Z4V5 671 aaPredicted RBP14.98□□□□□ -0.01
SHROOM2-202ENST00000418909 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
SHROOM2-202ENST00000418909 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
SHROOM2-202ENST00000418909 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.01
SHROOM2-202ENST00000418909 KIAA0586Q9BVV6 1533 aa14.96□□□□□ -0.01
SHROOM2-202ENST00000418909 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
SHROOM2-202ENST00000418909 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
SHROOM2-202ENST00000418909 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
SHROOM2-202ENST00000418909 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
SHROOM2-202ENST00000418909 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
SHROOM2-202ENST00000418909 EIF3AQ14152 1382 aaKnown RBP14.93□□□□□ -0.02
SHROOM2-202ENST00000418909 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
SHROOM2-202ENST00000418909 PNNQ9H307 717 aaKnown RBP14.93□□□□□ -0.02
SHROOM2-202ENST00000418909 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
SHROOM2-202ENST00000418909 SOX12O15370 315 aa14.92□□□□□ -0.02
SHROOM2-202ENST00000418909 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
SHROOM2-202ENST00000418909 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
SHROOM2-202ENST00000418909 CCDC144AA2RUR9 1427 aa14.91□□□□□ -0.02
SHROOM2-202ENST00000418909 ARXQ96QS3 562 aa14.91□□□□□ -0.02
SHROOM2-202ENST00000418909 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
SHROOM2-202ENST00000418909 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
SHROOM2-202ENST00000418909 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
SHROOM2-202ENST00000418909 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
SHROOM2-202ENST00000418909 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
SHROOM2-202ENST00000418909 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
SHROOM2-202ENST00000418909 NGDNQ8NEJ9 315 aaKnown RBP14.88□□□□□ -0.03
SHROOM2-202ENST00000418909 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
SHROOM2-202ENST00000418909 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHROOM2-202ENST00000418909 ARHGAP5Q13017 1502 aa14.88□□□□□ -0.03
SHROOM2-202ENST00000418909 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
SHROOM2-202ENST00000418909 TERF2IPQ9NYB0 399 aa14.87□□□□□ -0.03
SHROOM2-202ENST00000418909 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
SHROOM2-202ENST00000418909 KIF21BO75037 1637 aa14.86□□□□□ -0.03
SHROOM2-202ENST00000418909 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
SHROOM2-202ENST00000418909 CC2D1BQ5T0F9 858 aaKnown RBP14.86□□□□□ -0.03
SHROOM2-202ENST00000418909 CSB-PGBD3P0DP91 1061 aa14.85□□□□□ -0.03
SHROOM2-202ENST00000418909 GRIN2AQ12879 1464 aa14.85□□□□□ -0.03
SHROOM2-202ENST00000418909 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
SHROOM2-202ENST00000418909 FGD6Q6ZV73 1430 aa14.84□□□□□ -0.03
SHROOM2-202ENST00000418909 PLEKHH2Q8IVE3 1493 aa14.84□□□□□ -0.03
SHROOM2-202ENST00000418909 L3MBTL2Q969R5 705 aa14.84□□□□□ -0.03
SHROOM2-202ENST00000418909 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.04
SHROOM2-202ENST00000418909 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
SHROOM2-202ENST00000418909 TRAK1Q9UPV9 953 aa14.81□□□□□ -0.04
SHROOM2-202ENST00000418909 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
SHROOM2-202ENST00000418909 NPHP1O15259 732 aa14.81□□□□□ -0.04
SHROOM2-202ENST00000418909 HSPA5P11021 654 aaKnown RBP14.81□□□□□ -0.04
SHROOM2-202ENST00000418909 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
SHROOM2-202ENST00000418909 CCDC9Q9Y3X0 531 aaKnown RBP14.8□□□□□ -0.04
SHROOM2-202ENST00000418909 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
SHROOM2-202ENST00000418909 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
SHROOM2-202ENST00000418909 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
SHROOM2-202ENST00000418909 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
SHROOM2-202ENST00000418909 IQGAP2Q13576 1575 aa14.79□□□□□ -0.04
SHROOM2-202ENST00000418909 ANKRD50Q9ULJ7 1429 aa14.79□□□□□ -0.04
SHROOM2-202ENST00000418909 NUTM2FA1L443 756 aa14.77□□□□□ -0.04
SHROOM2-202ENST00000418909 RAPGEF3O95398 923 aa14.77□□□□□ -0.04
SHROOM2-202ENST00000418909 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.05
SHROOM2-202ENST00000418909 SCAPERQ9BY12 1400 aa14.76□□□□□ -0.05
SHROOM2-202ENST00000418909 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
SHROOM2-202ENST00000418909 RTF1Q92541 710 aaKnown RBP14.76□□□□□ -0.05
SHROOM2-202ENST00000418909 UPF2Q9HAU5 1272 aaKnown RBP14.76□□□□□ -0.05
SHROOM2-202ENST00000418909 MIER1Q8N108 512 aa14.75□□□□□ -0.05
SHROOM2-202ENST00000418909 CUL7Q14999 1698 aa14.75□□□□□ -0.05
SHROOM2-202ENST00000418909 THEMISQ8N1K5 641 aaPredicted RBP14.74□□□□□ -0.05
SHROOM2-202ENST00000418909 CD109Q6YHK3 1445 aa14.74□□□□□ -0.05
SHROOM2-202ENST00000418909 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
SHROOM2-202ENST00000418909 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
SHROOM2-202ENST00000418909 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
SHROOM2-202ENST00000418909 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
SHROOM2-202ENST00000418909 RTL5Q5HYW3 569 aaPredicted RBP14.72□□□□□ -0.05
SHROOM2-202ENST00000418909 EVC2Q86UK5 1308 aa14.71□□□□□ -0.05
SHROOM2-202ENST00000418909 ATF3P18847 181 aa14.71□□□□□ -0.05
SHROOM2-202ENST00000418909 FKBP8Q14318 412 aa14.71□□□□□ -0.05
SHROOM2-202ENST00000418909 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
SHROOM2-202ENST00000418909 MIA2Q96PC5 1412 aa14.71□□□□□ -0.05
SHROOM2-202ENST00000418909 AMPHP49418 695 aa14.7□□□□□ -0.06
SHROOM2-202ENST00000418909 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
SHROOM2-202ENST00000418909 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
SHROOM2-202ENST00000418909 CHMP4AQ9BY43 222 aa14.69□□□□□ -0.06
SHROOM2-202ENST00000418909 FTSJ3Q8IY81 847 aaKnown RBP14.69□□□□□ -0.06
SHROOM2-202ENST00000418909 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
SHROOM2-202ENST00000418909 SLC52A1Q9NWF4 448 aa14.69□□□□□ -0.06
SHROOM2-202ENST00000418909 U2AF1L5P0DN76 240 aaPredicted RBP14.68□□□□□ -0.06
SHROOM2-202ENST00000418909 U2AF1Q01081 240 aaKnown RBP eCLIP14.68□□□□□ -0.06
SHROOM2-202ENST00000418909 MINK1Q8N4C8 1332 aaPredicted RBP14.67□□□□□ -0.06
SHROOM2-202ENST00000418909 DHX57Q6P158 1386 aaKnown RBP14.67□□□□□ -0.06
SHROOM2-202ENST00000418909 CALD1Q05682 793 aaKnown RBP14.67□□□□□ -0.06
SHROOM2-202ENST00000418909 MS4A1P11836 297 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms