RNA–Protein interactions for RNA: ENST00000418333.6

TGFA-203, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-203ENST00000418333 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
TGFA-203ENST00000418333 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
TGFA-203ENST00000418333 ARHGAP5Q13017 1502 aa17.99■□□□□ 0.47
TGFA-203ENST00000418333 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
TGFA-203ENST00000418333 ARHGEF40Q8TER5 1519 aa17.98■□□□□ 0.47
TGFA-203ENST00000418333 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
TGFA-203ENST00000418333 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
TGFA-203ENST00000418333 APLP2Q06481 763 aa17.97■□□□□ 0.47
TGFA-203ENST00000418333 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
TGFA-203ENST00000418333 MAP3K1Q13233 1512 aa17.97■□□□□ 0.47
TGFA-203ENST00000418333 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
TGFA-203ENST00000418333 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
TGFA-203ENST00000418333 PLCH2O75038 1416 aa17.94■□□□□ 0.46
TGFA-203ENST00000418333 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
TGFA-203ENST00000418333 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
TGFA-203ENST00000418333 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
TGFA-203ENST00000418333 GPATCH8Q9UKJ3 1502 aaKnown RBP17.91■□□□□ 0.46
TGFA-203ENST00000418333 ZFYVE16Q7Z3T8 1539 aa17.9■□□□□ 0.46
TGFA-203ENST00000418333 SAMD9LQ8IVG5 1584 aa17.9■□□□□ 0.46
TGFA-203ENST00000418333 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.45
TGFA-203ENST00000418333 POGZQ7Z3K3 1410 aa17.89■□□□□ 0.45
TGFA-203ENST00000418333 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
TGFA-203ENST00000418333 SCAPERQ9BY12 1400 aa17.88■□□□□ 0.45
TGFA-203ENST00000418333 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
TGFA-203ENST00000418333 ABCC1P33527 1531 aa17.87■□□□□ 0.45
TGFA-203ENST00000418333 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
TGFA-203ENST00000418333 EFCAB2Q5VUJ9 269 aa17.86■□□□□ 0.45
TGFA-203ENST00000418333 SYCP2Q9BX26 1530 aa17.86■□□□□ 0.45
TGFA-203ENST00000418333 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
TGFA-203ENST00000418333 MADDQ8WXG6 1647 aa17.84■□□□□ 0.45
TGFA-203ENST00000418333 HECW2Q9P2P5 1572 aa17.83■□□□□ 0.44
TGFA-203ENST00000418333 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
TGFA-203ENST00000418333 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
TGFA-203ENST00000418333 ARHGEF12Q9NZN5 1544 aa17.82■□□□□ 0.44
TGFA-203ENST00000418333 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
TGFA-203ENST00000418333 RIMS1Q86UR5 1692 aaKnown RBP17.81■□□□□ 0.44
TGFA-203ENST00000418333 CAMSAP2Q08AD1 1489 aa17.81■□□□□ 0.44
TGFA-203ENST00000418333 MYOM3Q5VTT5 1437 aa17.8■□□□□ 0.44
TGFA-203ENST00000418333 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
TGFA-203ENST00000418333 KDM5CP41229 1560 aa17.79■□□□□ 0.44
TGFA-203ENST00000418333 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
TGFA-203ENST00000418333 PTPRMP28827 1452 aa17.78■□□□□ 0.44
TGFA-203ENST00000418333 PTPN23Q9H3S7 1636 aa17.77■□□□□ 0.44
TGFA-203ENST00000418333 FER1L4A9Z1Z3 1794 aa17.77■□□□□ 0.44
TGFA-203ENST00000418333 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.44
TGFA-203ENST00000418333 C9orf84Q5VXU9 1444 aa17.76■□□□□ 0.43
TGFA-203ENST00000418333 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
TGFA-203ENST00000418333 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
TGFA-203ENST00000418333 ATP10AO60312 1499 aa17.74■□□□□ 0.43
TGFA-203ENST00000418333 DIP2CQ9Y2E4 1556 aa17.73■□□□□ 0.43
TGFA-203ENST00000418333 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
TGFA-203ENST00000418333 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
TGFA-203ENST00000418333 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
TGFA-203ENST00000418333 AFAP1Q8N556 730 aa17.72■□□□□ 0.43
TGFA-203ENST00000418333 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
TGFA-203ENST00000418333 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
TGFA-203ENST00000418333 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
TGFA-203ENST00000418333 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
TGFA-203ENST00000418333 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
TGFA-203ENST00000418333 MLECQ14165 292 aa17.68■□□□□ 0.42
TGFA-203ENST00000418333 CCDC141Q6ZP82 1450 aa17.68■□□□□ 0.42
TGFA-203ENST00000418333 MBD5Q9P267 1494 aa17.68■□□□□ 0.42
TGFA-203ENST00000418333 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
TGFA-203ENST00000418333 REREQ9P2R6 1566 aa17.67■□□□□ 0.42
TGFA-203ENST00000418333 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
TGFA-203ENST00000418333 ATP7AQ04656 1500 aa17.67■□□□□ 0.42
TGFA-203ENST00000418333 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
TGFA-203ENST00000418333 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
TGFA-203ENST00000418333 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
TGFA-203ENST00000418333 DNMT1P26358 1616 aaKnown RBP17.64■□□□□ 0.41
TGFA-203ENST00000418333 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
TGFA-203ENST00000418333 SPAG9O60271 1321 aaKnown RBP17.63■□□□□ 0.41
TGFA-203ENST00000418333 AGLP35573 1532 aa17.59■□□□□ 0.41
TGFA-203ENST00000418333 LMTK3Q96Q04 1460 aa17.59■□□□□ 0.41
TGFA-203ENST00000418333 DAPK1P53355 1430 aa17.59■□□□□ 0.41
TGFA-203ENST00000418333 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
TGFA-203ENST00000418333 ABCC5O15440 1437 aa17.57■□□□□ 0.4
TGFA-203ENST00000418333 PREX1Q8TCU6 1659 aa17.57■□□□□ 0.4
TGFA-203ENST00000418333 ITGAEP38570 1179 aa17.55■□□□□ 0.4
TGFA-203ENST00000418333 ESF1Q9H501 851 aaKnown RBP17.54■□□□□ 0.4
TGFA-203ENST00000418333 SHANK2Q9UPX8 1470 aa17.54■□□□□ 0.4
TGFA-203ENST00000418333 C3P01024 1663 aa17.54■□□□□ 0.4
TGFA-203ENST00000418333 PLXNC1O60486 1568 aa17.53■□□□□ 0.4
TGFA-203ENST00000418333 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
TGFA-203ENST00000418333 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
TGFA-203ENST00000418333 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
TGFA-203ENST00000418333 RRBP1Q9P2E9 1410 aaKnown RBP17.52■□□□□ 0.4
TGFA-203ENST00000418333 A2MP01023 1474 aa17.51■□□□□ 0.39
TGFA-203ENST00000418333 RTEL1-TNFRSF6BF6WH68 1400 aa17.51■□□□□ 0.39
TGFA-203ENST00000418333 MROH2AA6NES4 1674 aa17.49■□□□□ 0.39
TGFA-203ENST00000418333 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
TGFA-203ENST00000418333 CNTLNQ9NXG0 1405 aa17.49■□□□□ 0.39
TGFA-203ENST00000418333 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
TGFA-203ENST00000418333 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
TGFA-203ENST00000418333 CEBPAP49715 358 aaPredicted RBP17.47■□□□□ 0.39
TGFA-203ENST00000418333 CLTCQ00610 1675 aaKnown RBP17.47■□□□□ 0.39
TGFA-203ENST00000418333 HSPA2P54652 639 aa17.46■□□□□ 0.39
TGFA-203ENST00000418333 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
TGFA-203ENST00000418333 KIF15Q9NS87 1388 aa17.45■□□□□ 0.38
TGFA-203ENST00000418333 RRP7BPQ9NSQ0 103 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms