RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 KIF14Q15058 1648 aa22.98■■□□□ 1.27
LINC01006-202ENST00000418309 LRRIQ1Q96JM4 1722 aa22.97■■□□□ 1.27
LINC01006-202ENST00000418309 ZMYM4Q5VZL5 1548 aa22.96■■□□□ 1.27
LINC01006-202ENST00000418309 ZFYVE16Q7Z3T8 1539 aa22.96■■□□□ 1.27
LINC01006-202ENST00000418309 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
LINC01006-202ENST00000418309 MADDQ8WXG6 1647 aa22.94■■□□□ 1.26
LINC01006-202ENST00000418309 MAGI2Q86UL8 1455 aa22.94■■□□□ 1.26
LINC01006-202ENST00000418309 POGZQ7Z3K3 1410 aa22.94■■□□□ 1.26
LINC01006-202ENST00000418309 CASKIN1Q8WXD9 1431 aa22.94■■□□□ 1.26
LINC01006-202ENST00000418309 PCF11O94913 1555 aaKnown RBP22.93■■□□□ 1.26
LINC01006-202ENST00000418309 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
LINC01006-202ENST00000418309 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
LINC01006-202ENST00000418309 MLECQ14165 292 aa22.91■■□□□ 1.26
LINC01006-202ENST00000418309 MYT1LQ9UL68 1186 aa22.91■■□□□ 1.26
LINC01006-202ENST00000418309 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
LINC01006-202ENST00000418309 RIMS1Q86UR5 1692 aaKnown RBP22.88■■□□□ 1.25
LINC01006-202ENST00000418309 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
LINC01006-202ENST00000418309 ATP10AO60312 1499 aa22.85■■□□□ 1.25
LINC01006-202ENST00000418309 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
LINC01006-202ENST00000418309 FYCO1Q9BQS8 1478 aa22.85■■□□□ 1.25
LINC01006-202ENST00000418309 ILDR1Q86SU0 546 aaPredicted RBP22.84■■□□□ 1.25
LINC01006-202ENST00000418309 SIGLEC1Q9BZZ2 1709 aa22.84■■□□□ 1.25
LINC01006-202ENST00000418309 CDC42BPBQ9Y5S2 1711 aa22.83■■□□□ 1.25
LINC01006-202ENST00000418309 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
LINC01006-202ENST00000418309 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
LINC01006-202ENST00000418309 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
LINC01006-202ENST00000418309 FER1L4A9Z1Z3 1794 aa22.76■■□□□ 1.23
LINC01006-202ENST00000418309 KDM5CP41229 1560 aa22.76■■□□□ 1.23
LINC01006-202ENST00000418309 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
LINC01006-202ENST00000418309 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
LINC01006-202ENST00000418309 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
LINC01006-202ENST00000418309 ABCC1P33527 1531 aa22.72■■□□□ 1.23
LINC01006-202ENST00000418309 ARHGEF12Q9NZN5 1544 aa22.72■■□□□ 1.23
LINC01006-202ENST00000418309 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
LINC01006-202ENST00000418309 HSPA2P54652 639 aa22.7■■□□□ 1.22
LINC01006-202ENST00000418309 MLH3Q9UHC1 1453 aa22.7■■□□□ 1.22
LINC01006-202ENST00000418309 DIP2CQ9Y2E4 1556 aa22.69■■□□□ 1.22
LINC01006-202ENST00000418309 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
LINC01006-202ENST00000418309 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
LINC01006-202ENST00000418309 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
LINC01006-202ENST00000418309 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
LINC01006-202ENST00000418309 CCNB3Q8WWL7 1395 aa22.66■■□□□ 1.22
LINC01006-202ENST00000418309 HNRNPMP52272 730 aaKnown RBP eCLIP22.66■■□□□ 1.222e-6■■■□□ 16.4
LINC01006-202ENST00000418309 ABCA6Q8N139 1617 aa22.66■■□□□ 1.22
LINC01006-202ENST00000418309 ESF1Q9H501 851 aaKnown RBP22.65■■□□□ 1.22
LINC01006-202ENST00000418309 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
LINC01006-202ENST00000418309 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
LINC01006-202ENST00000418309 REREQ9P2R6 1566 aa22.63■■□□□ 1.21
LINC01006-202ENST00000418309 SYCP2Q9BX26 1530 aa22.62■■□□□ 1.21
LINC01006-202ENST00000418309 SPAG9O60271 1321 aaKnown RBP22.61■■□□□ 1.21
LINC01006-202ENST00000418309 KIDINS220Q9ULH0 1771 aa22.61■■□□□ 1.21
LINC01006-202ENST00000418309 PLEKHH2Q8IVE3 1493 aa22.58■■□□□ 1.2
LINC01006-202ENST00000418309 AGLP35573 1532 aa22.57■■□□□ 1.2
LINC01006-202ENST00000418309 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
LINC01006-202ENST00000418309 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
LINC01006-202ENST00000418309 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
LINC01006-202ENST00000418309 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
LINC01006-202ENST00000418309 FBXO41Q8TF61 875 aa22.54■■□□□ 1.2
LINC01006-202ENST00000418309 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
LINC01006-202ENST00000418309 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
LINC01006-202ENST00000418309 ATP7AQ04656 1500 aa22.51■■□□□ 1.19
LINC01006-202ENST00000418309 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
LINC01006-202ENST00000418309 UHRF1BP1Q6BDS2 1440 aa22.5■■□□□ 1.19
LINC01006-202ENST00000418309 C3P01024 1663 aa22.5■■□□□ 1.19
LINC01006-202ENST00000418309 SUPT6HQ7KZ85 1726 aaKnown RBP22.5■■□□□ 1.19
LINC01006-202ENST00000418309 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
LINC01006-202ENST00000418309 A2MP01023 1474 aa22.46■■□□□ 1.19
LINC01006-202ENST00000418309 INO80Q9ULG1 1556 aaPredicted RBP22.46■■□□□ 1.19
LINC01006-202ENST00000418309 GGT6Q6P531 493 aa22.44■■□□□ 1.18
LINC01006-202ENST00000418309 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
LINC01006-202ENST00000418309 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
LINC01006-202ENST00000418309 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
LINC01006-202ENST00000418309 ZMYM3Q14202 1370 aa22.41■■□□□ 1.18
LINC01006-202ENST00000418309 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
LINC01006-202ENST00000418309 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.17
LINC01006-202ENST00000418309 PLXNC1O60486 1568 aa22.38■■□□□ 1.17
LINC01006-202ENST00000418309 CERKQ8TCT0 537 aa22.38■■□□□ 1.17
LINC01006-202ENST00000418309 MROH2AA6NES4 1674 aa22.37■■□□□ 1.17
LINC01006-202ENST00000418309 RSPH4AQ5TD94 716 aa22.37■■□□□ 1.17
LINC01006-202ENST00000418309 RTEL1-TNFRSF6BF6WH68 1400 aa22.37■■□□□ 1.17
LINC01006-202ENST00000418309 STRCQ7RTU9 1775 aa22.37■■□□□ 1.17
LINC01006-202ENST00000418309 CLTCQ00610 1675 aaKnown RBP22.36■■□□□ 1.17
LINC01006-202ENST00000418309 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
LINC01006-202ENST00000418309 NPATQ14207 1427 aa22.34■■□□□ 1.17
LINC01006-202ENST00000418309 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
LINC01006-202ENST00000418309 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
LINC01006-202ENST00000418309 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
LINC01006-202ENST00000418309 DHX29Q7Z478 1369 aaKnown RBP22.33■■□□□ 1.17
LINC01006-202ENST00000418309 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
LINC01006-202ENST00000418309 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
LINC01006-202ENST00000418309 KIF3BO15066 747 aa22.31■■□□□ 1.16
LINC01006-202ENST00000418309 KANK4Q5T7N3 995 aaPredicted RBP22.3■■□□□ 1.16
LINC01006-202ENST00000418309 PTPRTO14522 1441 aa22.27■■□□□ 1.16
LINC01006-202ENST00000418309 PTPRKQ15262 1439 aa22.26■■□□□ 1.15
LINC01006-202ENST00000418309 APLP2Q06481 763 aa22.26■■□□□ 1.15
LINC01006-202ENST00000418309 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
LINC01006-202ENST00000418309 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
LINC01006-202ENST00000418309 CAMSAP1Q5T5Y3 1602 aa22.24■■□□□ 1.15
LINC01006-202ENST00000418309 NCOA1Q15788 1441 aa22.24■■□□□ 1.15
LINC01006-202ENST00000418309 NCKAP5LQ9HCH0 1330 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms