RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 FBXO22Q8NEZ5 403 aa7.11□□□□□ -1.27
RFC4-205ENST00000418288 DSG3P32926 999 aa7.1□□□□□ -1.27
RFC4-205ENST00000418288 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
RFC4-205ENST00000418288 PDAP1Q13442 181 aaKnown RBP7.1□□□□□ -1.27
RFC4-205ENST00000418288 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
RFC4-205ENST00000418288 GOPCQ9HD26 462 aa7.1□□□□□ -1.27
RFC4-205ENST00000418288 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
RFC4-205ENST00000418288 MCM6Q14566 821 aa7.08□□□□□ -1.28
RFC4-205ENST00000418288 FOXD4L5Q5VV16 416 aaPredicted RBP7.08□□□□□ -1.28
RFC4-205ENST00000418288 ZNF467Q7Z7K2 595 aaPredicted RBP7.08□□□□□ -1.28
RFC4-205ENST00000418288 FOXD4L4Q8WXT5 416 aaPredicted RBP7.08□□□□□ -1.28
RFC4-205ENST00000418288 LARP6Q9BRS8 491 aaKnown RBP7.08□□□□□ -1.28
RFC4-205ENST00000418288 PARP9Q8IXQ6 854 aa7.07□□□□□ -1.28
RFC4-205ENST00000418288 PELP1Q8IZL8 1130 aaKnown RBP7.07□□□□□ -1.28
RFC4-205ENST00000418288 FNBP4Q8N3X1 1017 aaPredicted RBP7.07□□□□□ -1.28
RFC4-205ENST00000418288 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
RFC4-205ENST00000418288 CRISPLD2Q9H0B8 497 aa7.07□□□□□ -1.28
RFC4-205ENST00000418288 IRF5Q13568 498 aa7.06□□□□□ -1.28
RFC4-205ENST00000418288 AMHR2Q16671 573 aa7.06□□□□□ -1.28
RFC4-205ENST00000418288 PROSER2Q86WR7 435 aaPredicted RBP7.06□□□□□ -1.28
RFC4-205ENST00000418288 GZF1Q9H116 711 aaPredicted RBP7.06□□□□□ -1.28
RFC4-205ENST00000418288 SERPINA10Q9UK55 444 aa7.06□□□□□ -1.28
RFC4-205ENST00000418288 ZNF777Q9ULD5 760 aaPredicted RBP7.06□□□□□ -1.28
RFC4-205ENST00000418288 PDE4AP27815 886 aa7.04□□□□□ -1.28
RFC4-205ENST00000418288 RBM25P49756 843 aaKnown RBP7.04□□□□□ -1.28
RFC4-205ENST00000418288 CCDC102AQ96A19 550 aa7.03□□□□□ -1.28
RFC4-205ENST00000418288 CCDC97Q96F63 343 aaPredicted RBP7.03□□□□□ -1.28
RFC4-205ENST00000418288 DDX27Q96GQ7 796 aaKnown RBP7.03□□□□□ -1.28
RFC4-205ENST00000418288 MINK1Q8N4C8 1332 aaPredicted RBP7.02□□□□□ -1.28
RFC4-205ENST00000418288 NLRP6P59044 892 aa7.02□□□□□ -1.29
RFC4-205ENST00000418288 POM121Q96HA1 1249 aa7.02□□□□□ -1.29
RFC4-205ENST00000418288 PSEN1P49768 467 aa7.01□□□□□ -1.29
RFC4-205ENST00000418288 PCDHB8Q9UN66 801 aa7.01□□□□□ -1.29
RFC4-205ENST00000418288 PHF8Q9UPP1 1060 aa7.01□□□□□ -1.29
RFC4-205ENST00000418288 PCDHB13Q9Y5F0 798 aa7.01□□□□□ -1.29
RFC4-205ENST00000418288 MAP2K5Q13163 448 aa7□□□□□ -1.29
RFC4-205ENST00000418288 EFCAB3Q8N7B9 438 aa7□□□□□ -1.29
RFC4-205ENST00000418288 PCMTD1Q96MG8 357 aaPredicted RBP6.99□□□□□ -1.29
RFC4-205ENST00000418288 PLSCR2Q9NRY7 297 aa6.99□□□□□ -1.29
RFC4-205ENST00000418288 IRF6O14896 467 aa6.98□□□□□ -1.29
RFC4-205ENST00000418288 SOX12O15370 315 aa6.98□□□□□ -1.29
RFC4-205ENST00000418288 PDIA6Q15084 440 aa6.96□□□□□ -1.3
RFC4-205ENST00000418288 SPDYE1Q8NFV5 336 aaPredicted RBP6.96□□□□□ -1.3
RFC4-205ENST00000418288 E9PSI1 815 aa6.95□□□□□ -1.3
RFC4-205ENST00000418288 MS4A1P11836 297 aa6.95□□□□□ -1.3
RFC4-205ENST00000418288 SH3D19Q5HYK7 790 aa6.95□□□□□ -1.3
RFC4-205ENST00000418288 OXER1Q8TDS5 423 aa6.95□□□□□ -1.3
RFC4-205ENST00000418288 MS4A4AQ96JQ5 239 aa6.95□□□□□ -1.3
RFC4-205ENST00000418288 HSP90B1P14625 803 aaKnown RBP6.94□□□□□ -1.3
RFC4-205ENST00000418288 ZNF579Q8NAF0 562 aaKnown RBP6.94□□□□□ -1.3
RFC4-205ENST00000418288 FBXW7Q969H0 707 aa6.94□□□□□ -1.3
RFC4-205ENST00000418288 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
RFC4-205ENST00000418288 HMGB1P09429 215 aaKnown RBP6.93□□□□□ -1.3
RFC4-205ENST00000418288 PRR29P0C7W0 189 aa6.93□□□□□ -1.3
RFC4-205ENST00000418288 SPDYE16A6NNV3 312 aaPredicted RBP6.92□□□□□ -1.3
RFC4-205ENST00000418288 DPYSL4O14531 572 aa6.92□□□□□ -1.3
RFC4-205ENST00000418288 MYT1Q01538 1121 aa6.92□□□□□ -1.3
RFC4-205ENST00000418288 CABP2Q9NPB3 220 aa6.92□□□□□ -1.3
RFC4-205ENST00000418288 EMILIN3Q9NT22 766 aa6.92□□□□□ -1.3
RFC4-205ENST00000418288 COG6Q9Y2V7 657 aa6.92□□□□□ -1.3
RFC4-205ENST00000418288 PPP1R15AO75807 674 aaPredicted RBP6.91□□□□□ -1.3
RFC4-205ENST00000418288 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
RFC4-205ENST00000418288 GIGYF2Q6Y7W6 1299 aaKnown RBP6.91□□□□□ -1.3
RFC4-205ENST00000418288 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
RFC4-205ENST00000418288 TTBK1Q5TCY1 1321 aaPredicted RBP6.91□□□□□ -1.3
RFC4-205ENST00000418288 REPIN1Q9BWE0 567 aaKnown RBP6.9□□□□□ -1.3
RFC4-205ENST00000418288 GNPATO15228 680 aa6.89□□□□□ -1.31
RFC4-205ENST00000418288 FECHP22830 423 aa6.89□□□□□ -1.31
RFC4-205ENST00000418288 TTLL12Q14166 644 aaPredicted RBP6.89□□□□□ -1.31
RFC4-205ENST00000418288 PPP1R15BQ5SWA1 713 aa6.89□□□□□ -1.31
RFC4-205ENST00000418288 AMOTL2Q9Y2J4 779 aa6.89□□□□□ -1.31
RFC4-205ENST00000418288 KCNA1Q09470 495 aa6.88□□□□□ -1.31
RFC4-205ENST00000418288 TSPYL2Q9H2G4 693 aaPredicted RBP6.88□□□□□ -1.31
RFC4-205ENST00000418288 SPDYE5A6NIY4 337 aa6.87□□□□□ -1.31
RFC4-205ENST00000418288 PATL2C9JE40 543 aaKnown RBP6.87□□□□□ -1.31
RFC4-205ENST00000418288 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
RFC4-205ENST00000418288 SKIV2LQ15477 1246 aaKnown RBP6.86□□□□□ -1.31
RFC4-205ENST00000418288 SP7Q8TDD2 431 aaPredicted RBP6.86□□□□□ -1.31
RFC4-205ENST00000418288 CCDC61Q9Y6R9 512 aa6.86□□□□□ -1.31
RFC4-205ENST00000418288 NUTM2FA1L443 756 aa6.85□□□□□ -1.31
RFC4-205ENST00000418288 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
RFC4-205ENST00000418288 BRD1O95696 1058 aa6.85□□□□□ -1.31
RFC4-205ENST00000418288 PDE4CQ08493 712 aa6.85□□□□□ -1.31
RFC4-205ENST00000418288 HIC1Q14526 733 aa6.85□□□□□ -1.31
RFC4-205ENST00000418288 TMUB1Q9BVT8 246 aa6.85□□□□□ -1.31
RFC4-205ENST00000418288 ZNF330Q9Y3S2 320 aaPredicted RBP6.85□□□□□ -1.31
RFC4-205ENST00000418288 IFNL1Q8IU54 200 aa6.84□□□□□ -1.31
RFC4-205ENST00000418288 PROCA1Q8NCQ7 364 aaPredicted RBP6.84□□□□□ -1.31
RFC4-205ENST00000418288 GPHNQ9NQX3 736 aaPredicted RBP6.83□□□□□ -1.32
RFC4-205ENST00000418288 IGSF5Q9NSI5 407 aa6.83□□□□□ -1.32
RFC4-205ENST00000418288 FCHSD2O94868 740 aa6.82□□□□□ -1.32
RFC4-205ENST00000418288 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.82□□□□□ -1.32
RFC4-205ENST00000418288 SNRKQ9NRH2 765 aa6.82□□□□□ -1.32
RFC4-205ENST00000418288 USP35Q9P2H5 1018 aa6.82□□□□□ -1.32
RFC4-205ENST00000418288 OSBPP22059 807 aa6.81□□□□□ -1.32
RFC4-205ENST00000418288 USTQ9Y2C2 406 aa6.81□□□□□ -1.32
RFC4-205ENST00000418288 UNCXA6NJT0 531 aa6.8□□□□□ -1.32
RFC4-205ENST00000418288 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
RFC4-205ENST00000418288 RSPH4AQ5TD94 716 aa6.8□□□□□ -1.32
RFC4-205ENST00000418288 BANK1Q8NDB2 785 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms