RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
SATB1-204ENST00000417717 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
SATB1-204ENST00000417717 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
SATB1-204ENST00000417717 TSPYL1Q9H0U9 437 aa12.99□□□□□ -0.33
SATB1-204ENST00000417717 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
SATB1-204ENST00000417717 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
SATB1-204ENST00000417717 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
SATB1-204ENST00000417717 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
SATB1-204ENST00000417717 TPRNQ4KMQ1 711 aa12.95□□□□□ -0.34
SATB1-204ENST00000417717 PHF14O94880 888 aa12.95□□□□□ -0.34
SATB1-204ENST00000417717 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
SATB1-204ENST00000417717 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
SATB1-204ENST00000417717 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
SATB1-204ENST00000417717 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
SATB1-204ENST00000417717 DIAPH3Q9NSV4 1193 aa12.92□□□□□ -0.34
SATB1-204ENST00000417717 CLIP1P30622 1438 aa12.92□□□□□ -0.34
SATB1-204ENST00000417717 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
SATB1-204ENST00000417717 HMGN5P82970 282 aaKnown RBP12.92□□□□□ -0.34
SATB1-204ENST00000417717 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
SATB1-204ENST00000417717 CEP162Q5TB80 1403 aa12.92□□□□□ -0.34
SATB1-204ENST00000417717 MS4A1P11836 297 aa12.91□□□□□ -0.34
SATB1-204ENST00000417717 MRE11P49959 708 aa12.91□□□□□ -0.34
SATB1-204ENST00000417717 STK11IPQ8N1F8 1099 aa12.91□□□□□ -0.34
SATB1-204ENST00000417717 PDCL3Q9H2J4 239 aa12.91□□□□□ -0.34
SATB1-204ENST00000417717 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
SATB1-204ENST00000417717 DEF6Q9H4E7 631 aa12.9□□□□□ -0.34
SATB1-204ENST00000417717 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
SATB1-204ENST00000417717 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
SATB1-204ENST00000417717 FTSJ3Q8IY81 847 aaKnown RBP12.88□□□□□ -0.35
SATB1-204ENST00000417717 USP8P40818 1118 aa12.88□□□□□ -0.35
SATB1-204ENST00000417717 CC2D1BQ5T0F9 858 aaKnown RBP12.88□□□□□ -0.35
SATB1-204ENST00000417717 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
SATB1-204ENST00000417717 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
SATB1-204ENST00000417717 SOGA1O94964 1423 aa12.87□□□□□ -0.35
SATB1-204ENST00000417717 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
SATB1-204ENST00000417717 HIRIP3Q9BW71 556 aaPredicted RBP12.86□□□□□ -0.35
SATB1-204ENST00000417717 IRX3P78415 501 aaPredicted RBP12.85□□□□□ -0.35
SATB1-204ENST00000417717 NFKBIBQ15653 356 aa12.85□□□□□ -0.35
SATB1-204ENST00000417717 PDE4AP27815 886 aa12.84□□□□□ -0.35
SATB1-204ENST00000417717 TPM4P67936 248 aa12.84□□□□□ -0.35
SATB1-204ENST00000417717 NEFHP12036 1026 aa12.84□□□□□ -0.35
SATB1-204ENST00000417717 RBM10P98175 930 aaKnown RBP12.84□□□□□ -0.35
SATB1-204ENST00000417717 FRAT1Q92837 279 aaPredicted RBP12.84□□□□□ -0.35
SATB1-204ENST00000417717 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
SATB1-204ENST00000417717 MCCP23508 829 aa12.84□□□□□ -0.35
SATB1-204ENST00000417717 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
SATB1-204ENST00000417717 C14orf37Q86TY3 774 aa12.83□□□□□ -0.35
SATB1-204ENST00000417717 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
SATB1-204ENST00000417717 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
SATB1-204ENST00000417717 CFTRP13569 1480 aa12.82□□□□□ -0.36
SATB1-204ENST00000417717 H0YHG0 523 aa12.81□□□□□ -0.36
SATB1-204ENST00000417717 ACBD3Q9H3P7 528 aa12.81□□□□□ -0.36
SATB1-204ENST00000417717 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
SATB1-204ENST00000417717 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
SATB1-204ENST00000417717 CUX2O14529 1486 aa12.78□□□□□ -0.36
SATB1-204ENST00000417717 HSP90B2PQ58FF3 399 aa12.78□□□□□ -0.36
SATB1-204ENST00000417717 CALCOCO1Q9P1Z2 691 aa12.78□□□□□ -0.36
SATB1-204ENST00000417717 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
SATB1-204ENST00000417717 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
SATB1-204ENST00000417717 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
SATB1-204ENST00000417717 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
SATB1-204ENST00000417717 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
SATB1-204ENST00000417717 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
SATB1-204ENST00000417717 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
SATB1-204ENST00000417717 TPM3P06753 285 aa12.76□□□□□ -0.37
SATB1-204ENST00000417717 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
SATB1-204ENST00000417717 ESPNB1AK53 854 aa12.76□□□□□ -0.37
SATB1-204ENST00000417717 AK7Q96M32 723 aa12.76□□□□□ -0.37
SATB1-204ENST00000417717 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
SATB1-204ENST00000417717 SSR1P43307 286 aaKnown RBP12.75□□□□□ -0.37
SATB1-204ENST00000417717 GNL2Q13823 731 aaKnown RBP12.75□□□□□ -0.37
SATB1-204ENST00000417717 RCAN3Q9UKA8 241 aa12.75□□□□□ -0.37
SATB1-204ENST00000417717 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
SATB1-204ENST00000417717 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
SATB1-204ENST00000417717 HMMRO75330 724 aa12.74□□□□□ -0.37
SATB1-204ENST00000417717 DNAJC2Q99543 621 aaKnown RBP12.74□□□□□ -0.37
SATB1-204ENST00000417717 CCDC70Q6NSX1 233 aa12.74□□□□□ -0.37
SATB1-204ENST00000417717 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
SATB1-204ENST00000417717 CCDC173Q0VFZ6 552 aa12.74□□□□□ -0.37
SATB1-204ENST00000417717 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
SATB1-204ENST00000417717 ZNF592Q92610 1267 aa12.73□□□□□ -0.37
SATB1-204ENST00000417717 CGNQ9P2M7 1197 aaKnown RBP12.73□□□□□ -0.37
SATB1-204ENST00000417717 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
SATB1-204ENST00000417717 FGD1P98174 961 aa12.72□□□□□ -0.37
SATB1-204ENST00000417717 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
SATB1-204ENST00000417717 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
SATB1-204ENST00000417717 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
SATB1-204ENST00000417717 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.37
SATB1-204ENST00000417717 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.37
SATB1-204ENST00000417717 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
SATB1-204ENST00000417717 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.38
SATB1-204ENST00000417717 UQCRHP07919 91 aa12.71□□□□□ -0.38
SATB1-204ENST00000417717 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.38
SATB1-204ENST00000417717 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.38
SATB1-204ENST00000417717 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
SATB1-204ENST00000417717 CDR1P51861 262 aa12.7□□□□□ -0.38
SATB1-204ENST00000417717 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
SATB1-204ENST00000417717 MNS1Q8NEH6 495 aa12.69□□□□□ -0.38
SATB1-204ENST00000417717 CLGNO14967 610 aa12.69□□□□□ -0.38
SATB1-204ENST00000417717 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms