RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
NECAB1-201ENST00000417640 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
NECAB1-201ENST00000417640 DNTTIP2Q5QJE6 756 aaKnown RBP23.95■■□□□ 1.42
NECAB1-201ENST00000417640 L1TD1Q5T7N2 865 aaKnown RBP23.95■■□□□ 1.42
NECAB1-201ENST00000417640 L3MBTL2Q969R5 705 aa23.93■■□□□ 1.42
NECAB1-201ENST00000417640 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
NECAB1-201ENST00000417640 MORC1Q86VD1 984 aa23.9■■□□□ 1.42
NECAB1-201ENST00000417640 IPO9Q96P70 1041 aaKnown RBP23.9■■□□□ 1.42
NECAB1-201ENST00000417640 ROCK2O75116 1388 aaKnown RBP23.88■■□□□ 1.41
NECAB1-201ENST00000417640 KANK1Q14678 1352 aa23.87■■□□□ 1.41
NECAB1-201ENST00000417640 ZRSR1Q15695 479 aaKnown RBP23.86■■□□□ 1.41
NECAB1-201ENST00000417640 NUP155O75694 1391 aa23.85■■□□□ 1.41
NECAB1-201ENST00000417640 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
NECAB1-201ENST00000417640 TPRNQ4KMQ1 711 aa23.84■■□□□ 1.41
NECAB1-201ENST00000417640 ANKRD30AQ9BXX3 1397 aa23.82■■□□□ 1.4
NECAB1-201ENST00000417640 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
NECAB1-201ENST00000417640 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
NECAB1-201ENST00000417640 SPRYD3Q8NCJ5 442 aa23.8■■□□□ 1.4
NECAB1-201ENST00000417640 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
NECAB1-201ENST00000417640 FHOD3Q2V2M9 1422 aa23.79■■□□□ 1.4
NECAB1-201ENST00000417640 PLCB2Q00722 1185 aa23.77■■□□□ 1.4
NECAB1-201ENST00000417640 CFAP44Q96MT7 982 aa23.77■■□□□ 1.4
NECAB1-201ENST00000417640 RWDD1Q9H446 243 aaPredicted RBP23.77■■□□□ 1.4
NECAB1-201ENST00000417640 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
NECAB1-201ENST00000417640 IPO8O15397 1037 aaKnown RBP23.75■■□□□ 1.39
NECAB1-201ENST00000417640 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
NECAB1-201ENST00000417640 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
NECAB1-201ENST00000417640 LMOD2Q6P5Q4 547 aa23.75■■□□□ 1.39
NECAB1-201ENST00000417640 GOLGA2Q08379 1002 aa23.73■■□□□ 1.39
NECAB1-201ENST00000417640 SLKQ9H2G2 1235 aaPredicted RBP23.73■■□□□ 1.39
NECAB1-201ENST00000417640 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
NECAB1-201ENST00000417640 MSNP26038 577 aaKnown RBP23.71■■□□□ 1.39
NECAB1-201ENST00000417640 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
NECAB1-201ENST00000417640 TRHP20396 242 aaPredicted RBP23.7■■□□□ 1.38
NECAB1-201ENST00000417640 OS9Q13438 667 aaPredicted RBP23.7■■□□□ 1.38
NECAB1-201ENST00000417640 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
NECAB1-201ENST00000417640 NPHP1O15259 732 aa23.7■■□□□ 1.38
NECAB1-201ENST00000417640 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
NECAB1-201ENST00000417640 GBP4Q96PP9 640 aa23.69■■□□□ 1.38
NECAB1-201ENST00000417640 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
NECAB1-201ENST00000417640 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
NECAB1-201ENST00000417640 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
NECAB1-201ENST00000417640 MCCP23508 829 aa23.68■■□□□ 1.38
NECAB1-201ENST00000417640 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
NECAB1-201ENST00000417640 PHLDB1Q86UU1 1377 aa23.67■■□□□ 1.38
NECAB1-201ENST00000417640 KCNJ4P48050 445 aa23.67■■□□□ 1.38
NECAB1-201ENST00000417640 PTMSP20962 102 aa23.66■■□□□ 1.38
NECAB1-201ENST00000417640 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
NECAB1-201ENST00000417640 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
NECAB1-201ENST00000417640 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
NECAB1-201ENST00000417640 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.38
NECAB1-201ENST00000417640 ITPRIPQ8IWB1 547 aa23.64■■□□□ 1.38
NECAB1-201ENST00000417640 FANCIQ9NVI1 1328 aa23.63■■□□□ 1.37
NECAB1-201ENST00000417640 FGD1P98174 961 aa23.63■■□□□ 1.37
NECAB1-201ENST00000417640 GZF1Q9H116 711 aaPredicted RBP23.63■■□□□ 1.37
NECAB1-201ENST00000417640 USP35Q9P2H5 1018 aa23.63■■□□□ 1.37
NECAB1-201ENST00000417640 CCDC18Q5T9S5 1454 aa23.63■■□□□ 1.37
NECAB1-201ENST00000417640 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
NECAB1-201ENST00000417640 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
NECAB1-201ENST00000417640 GOLGA6L4A6NEF3 574 aa23.61■■□□□ 1.37
NECAB1-201ENST00000417640 GOLGA6L6A8MZA4 724 aa23.61■■□□□ 1.37
NECAB1-201ENST00000417640 CALD1Q05682 793 aaKnown RBP23.61■■□□□ 1.37
NECAB1-201ENST00000417640 HDGFL2Q7Z4V5 671 aaPredicted RBP23.61■■□□□ 1.37
NECAB1-201ENST00000417640 ST20-MTHFSA0A0A6YYL1 179 aa23.59■■□□□ 1.37
NECAB1-201ENST00000417640 CHAF1AQ13111 956 aaPredicted RBP23.59■■□□□ 1.37
NECAB1-201ENST00000417640 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.37
NECAB1-201ENST00000417640 PDE4AP27815 886 aa23.58■■□□□ 1.37
NECAB1-201ENST00000417640 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.37
NECAB1-201ENST00000417640 NRDCO43847 1150 aa23.57■■□□□ 1.36
NECAB1-201ENST00000417640 GOLGA6L3A6NEY3 463 aa23.56■■□□□ 1.36
NECAB1-201ENST00000417640 MFAP1P55081 439 aaKnown RBP23.56■■□□□ 1.36
NECAB1-201ENST00000417640 CCDC146Q8IYE0 955 aa23.56■■□□□ 1.36
NECAB1-201ENST00000417640 GGT6Q6P531 493 aa23.56■■□□□ 1.36
NECAB1-201ENST00000417640 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
NECAB1-201ENST00000417640 STK26Q9P289 416 aa23.56■■□□□ 1.36
NECAB1-201ENST00000417640 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
NECAB1-201ENST00000417640 SMC4Q9NTJ3 1288 aa23.55■■□□□ 1.36
NECAB1-201ENST00000417640 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.36
NECAB1-201ENST00000417640 CENPQQ7L2Z9 268 aaPredicted RBP23.54■■□□□ 1.36
NECAB1-201ENST00000417640 APBB1O00213 710 aa23.53■■□□□ 1.36
NECAB1-201ENST00000417640 EXOC6Q8TAG9 804 aa23.53■■□□□ 1.36
NECAB1-201ENST00000417640 RTF1Q92541 710 aaKnown RBP23.52■■□□□ 1.36
NECAB1-201ENST00000417640 CLUAP1Q96AJ1 413 aa23.52■■□□□ 1.36
NECAB1-201ENST00000417640 SOX12O15370 315 aa23.5■■□□□ 1.35
NECAB1-201ENST00000417640 FAM161AQ3B820 660 aa23.5■■□□□ 1.35
NECAB1-201ENST00000417640 USP47Q96K76 1375 aa23.5■■□□□ 1.35
NECAB1-201ENST00000417640 PANK3Q9H999 370 aa23.5■■□□□ 1.35
NECAB1-201ENST00000417640 NAP1L2Q9ULW6 460 aaPredicted RBP23.48■■□□□ 1.35
NECAB1-201ENST00000417640 PLIN1O60240 522 aa23.46■■□□□ 1.35
NECAB1-201ENST00000417640 KIAA1211Q6ZU35 1233 aa23.46■■□□□ 1.35
NECAB1-201ENST00000417640 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.46■■□□□ 1.35
NECAB1-201ENST00000417640 MLECQ14165 292 aa23.44■■□□□ 1.34
NECAB1-201ENST00000417640 CCDC144AA2RUR9 1427 aa23.44■■□□□ 1.34
NECAB1-201ENST00000417640 CRBNQ96SW2 442 aa23.43■■□□□ 1.34
NECAB1-201ENST00000417640 KIF3BO15066 747 aa23.43■■□□□ 1.34
NECAB1-201ENST00000417640 DRC7Q8IY82 874 aa23.43■■□□□ 1.34
NECAB1-201ENST00000417640 TAOK2Q9UL54 1235 aa23.43■■□□□ 1.34
NECAB1-201ENST00000417640 KIAA2012Q0VF49 1180 aa23.42■■□□□ 1.34
NECAB1-201ENST00000417640 SYAP1Q96A49 352 aaPredicted RBP23.42■■□□□ 1.34
NECAB1-201ENST00000417640 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms