RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CCNB3Q8WWL7 1395 aa27.45■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 PREX2Q70Z35 1606 aa27.44■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 SUPT6HQ7KZ85 1726 aaKnown RBP27.44■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 ARHGAP5Q13017 1502 aa27.42■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 CDC42BPBQ9Y5S2 1711 aa27.42■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 CDC42BPAQ5VT25 1732 aa27.41■■□□□ 1.98
COMMD3-BMI1-201ENST00000417470 CFDP1Q9UEE9 299 aaPredicted RBP27.38■■□□□ 1.97
COMMD3-BMI1-201ENST00000417470 DENND4BO75064 1496 aaPredicted RBP27.38■■□□□ 1.97
COMMD3-BMI1-201ENST00000417470 ADGRL1O94910 1474 aa27.38■■□□□ 1.97
COMMD3-BMI1-201ENST00000417470 SCAPERQ9BY12 1400 aa27.35■■□□□ 1.97
COMMD3-BMI1-201ENST00000417470 RAPGEF3O95398 923 aa27.33■■□□□ 1.97
COMMD3-BMI1-201ENST00000417470 ITSN2Q9NZM3 1697 aa27.32■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 KIAA1107Q9UPP5 1409 aa27.3■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 POGZQ7Z3K3 1410 aa27.29■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 PLEKHH2Q8IVE3 1493 aa27.29■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 FRMPD1Q5SYB0 1578 aa27.28■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 ABCC1P33527 1531 aa27.28■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 RICTORQ6R327 1708 aa27.27■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 SAMD9LQ8IVG5 1584 aa27.26■■□□□ 1.96
COMMD3-BMI1-201ENST00000417470 MIA2Q96PC5 1412 aa27.26■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 ZNF777Q9ULD5 760 aaPredicted RBP27.26■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 ARHGEF12Q9NZN5 1544 aa27.25■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 ZNF518AQ6AHZ1 1483 aa27.24■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 ZMYM4Q5VZL5 1548 aa27.23■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 MAGI2Q86UL8 1455 aa27.23■■□□□ 1.95
COMMD3-BMI1-201ENST00000417470 AFAP1Q8N556 730 aa27.2■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 ZNF644Q9H582 1327 aaPredicted RBP27.19■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 KDM5CP41229 1560 aa27.19■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 HNRNPMP52272 730 aaKnown RBP eCLIP27.18■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 RSPH4AQ5TD94 716 aa27.18■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 MBD5Q9P267 1494 aa27.17■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 MLH3Q9UHC1 1453 aa27.15■■□□□ 1.94
COMMD3-BMI1-201ENST00000417470 FGD6Q6ZV73 1430 aa27.11■■□□□ 1.93
COMMD3-BMI1-201ENST00000417470 ZFYVE16Q7Z3T8 1539 aa27.09■■□□□ 1.93
COMMD3-BMI1-201ENST00000417470 ARHGEF40Q8TER5 1519 aa27.08■■□□□ 1.93
COMMD3-BMI1-201ENST00000417470 YEATS2Q9ULM3 1422 aa27.07■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 TCOF1Q13428 1488 aaKnown RBP27.07■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 ARHGEF5Q12774 1597 aa27.07■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 HECW2Q9P2P5 1572 aa27.06■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 CCDC141Q6ZP82 1450 aa27.05■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 RTEL1-TNFRSF6BF6WH68 1400 aa27.04■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 ATP10AO60312 1499 aa27.03■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
COMMD3-BMI1-201ENST00000417470 KIDINS220Q9ULH0 1771 aa27■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 TSPY4P0CV99 314 aa26.99■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 TSPY10P0CW01 314 aa26.99■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 C9orf84Q5VXU9 1444 aa26.98■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 ATP7AQ04656 1500 aa26.97■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 REREQ9P2R6 1566 aa26.97■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 DIP2CQ9Y2E4 1556 aa26.97■■□□□ 1.91
COMMD3-BMI1-201ENST00000417470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.95■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 ABCA6Q8N139 1617 aa26.94■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 ABCC5O15440 1437 aa26.93■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 MAST1Q9Y2H9 1570 aa26.92■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 SHANK2Q9UPX8 1470 aa26.9■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 DAPK1P53355 1430 aa26.9■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 DNMT1P26358 1616 aaKnown RBP26.89■■□□□ 1.9
COMMD3-BMI1-201ENST00000417470 RRBP1Q9P2E9 1410 aaKnown RBP26.89■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 KDM4FA0A1W2PPD8 638 aa26.88■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 FAM50AQ14320 339 aaKnown RBP26.88■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 AGLP35573 1532 aa26.88■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 ARID4BQ4LE39 1312 aaPredicted RBP26.88■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 A2MP01023 1474 aa26.85■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 SIGLEC1Q9BZZ2 1709 aa26.84■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 DHX29Q7Z478 1369 aaKnown RBP26.84■■□□□ 1.89
COMMD3-BMI1-201ENST00000417470 ADGBQ8N7X0 1667 aa26.82■■□□□ 1.88
COMMD3-BMI1-201ENST00000417470 PLXNC1O60486 1568 aa26.82■■□□□ 1.88
COMMD3-BMI1-201ENST00000417470 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
COMMD3-BMI1-201ENST00000417470 BCORL1Q5H9F3 1711 aa26.81■■□□□ 1.88
COMMD3-BMI1-201ENST00000417470 ADAMTSL3P82987 1691 aa26.77■■□□□ 1.88
COMMD3-BMI1-201ENST00000417470 ADGRL2O95490 1459 aa26.76■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 NCOA1Q15788 1441 aa26.75■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 ANKRD30AQ9BXX3 1397 aa26.75■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 PTPRKQ15262 1439 aa26.73■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 CHIC2Q9UKJ5 165 aa26.72■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 KIF15Q9NS87 1388 aa26.71■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 DUOX2Q9NRD8 1548 aa26.71■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 PPP6R1Q9UPN7 881 aa26.71■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 ROCK1Q13464 1354 aa26.71■■□□□ 1.87
COMMD3-BMI1-201ENST00000417470 MLECQ14165 292 aa26.7■■□□□ 1.86
COMMD3-BMI1-201ENST00000417470 RRP7BPQ9NSQ0 103 aa26.69■■□□□ 1.86
COMMD3-BMI1-201ENST00000417470 ERBINQ96RT1 1412 aa26.66■■□□□ 1.86
COMMD3-BMI1-201ENST00000417470 KIF3BO15066 747 aa26.66■■□□□ 1.86
COMMD3-BMI1-201ENST00000417470 MADDQ8WXG6 1647 aa26.65■■□□□ 1.86
COMMD3-BMI1-201ENST00000417470 EIF2AK4Q9P2K8 1649 aaKnown RBP26.64■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 GGT6Q6P531 493 aa26.62■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 PTPRMP28827 1452 aa26.62■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 ITGAEP38570 1179 aa26.6■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 AEBP2Q6ZN18 517 aaPredicted RBP26.59■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 FAM135AQ9P2D6 1515 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms