RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
CCNT1-202ENST00000417344 ANP32AP39687 249 aaKnown RBP8.76□□□□□ -1.01
CCNT1-202ENST00000417344 ABCC8Q09428 1581 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 WASHC2CQ9Y4E1 1318 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 EEA1Q15075 1411 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 HAX1O00165 279 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 IFNL1Q8IU54 200 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 PCDHB8Q9UN66 801 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 CCDC88BA6NC98 1476 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 GOLGA3Q08378 1498 aa8.76□□□□□ -1.01
CCNT1-202ENST00000417344 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
CCNT1-202ENST00000417344 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
CCNT1-202ENST00000417344 SOGA1O94964 1423 aa8.75□□□□□ -1.01
CCNT1-202ENST00000417344 USP35Q9P2H5 1018 aa8.75□□□□□ -1.01
CCNT1-202ENST00000417344 PSEN1P49768 467 aa8.74□□□□□ -1.01
CCNT1-202ENST00000417344 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
CCNT1-202ENST00000417344 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
CCNT1-202ENST00000417344 VPS8Q8N3P4 1428 aa8.73□□□□□ -1.01
CCNT1-202ENST00000417344 B4GALNT3Q6L9W6 998 aa8.73□□□□□ -1.01
CCNT1-202ENST00000417344 POTEHQ6S545 545 aa8.73□□□□□ -1.01
CCNT1-202ENST00000417344 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
CCNT1-202ENST00000417344 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
CCNT1-202ENST00000417344 CLIP1P30622 1438 aa8.73□□□□□ -1.01
CCNT1-202ENST00000417344 GLIPR1L2Q4G1C9 344 aa8.72□□□□□ -1.01
CCNT1-202ENST00000417344 HNRNPUQ00839 825 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCNT1-202ENST00000417344 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
CCNT1-202ENST00000417344 PAXIP1Q6ZW49 1069 aaPredicted RBP8.7□□□□□ -1.02
CCNT1-202ENST00000417344 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
CCNT1-202ENST00000417344 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
CCNT1-202ENST00000417344 NEFMP07197 916 aa8.7□□□□□ -1.02
CCNT1-202ENST00000417344 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
CCNT1-202ENST00000417344 CUX2O14529 1486 aa8.69□□□□□ -1.02
CCNT1-202ENST00000417344 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
CCNT1-202ENST00000417344 NKX1-1Q15270 411 aaPredicted RBP8.67□□□□□ -1.02
CCNT1-202ENST00000417344 ZMYND15Q9H091 742 aa8.67□□□□□ -1.02
CCNT1-202ENST00000417344 RUSC2Q8N2Y8 1516 aa8.66□□□□□ -1.02
CCNT1-202ENST00000417344 TIE1P35590 1138 aa8.66□□□□□ -1.02
CCNT1-202ENST00000417344 CFAP44Q96MT7 982 aa8.66□□□□□ -1.02
CCNT1-202ENST00000417344 SCRIBQ14160 1630 aa8.66□□□□□ -1.02
CCNT1-202ENST00000417344 WDR97A6NE52 1622 aa8.65□□□□□ -1.02
CCNT1-202ENST00000417344 CEP164Q9UPV0 1460 aa8.65□□□□□ -1.02
CCNT1-202ENST00000417344 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
CCNT1-202ENST00000417344 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
CCNT1-202ENST00000417344 PPM1GO15355 546 aaPredicted RBP8.64□□□□□ -1.03
CCNT1-202ENST00000417344 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
CCNT1-202ENST00000417344 VSIG10Q8N0Z9 540 aa8.64□□□□□ -1.03
CCNT1-202ENST00000417344 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
CCNT1-202ENST00000417344 EVX2Q03828 476 aa8.63□□□□□ -1.03
CCNT1-202ENST00000417344 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
CCNT1-202ENST00000417344 FAM43AQ8N2R8 423 aa8.63□□□□□ -1.03
CCNT1-202ENST00000417344 TMEM106CQ9BVX2 250 aa8.63□□□□□ -1.03
CCNT1-202ENST00000417344 RRBP1Q9P2E9 1410 aaKnown RBP8.62□□□□□ -1.03
CCNT1-202ENST00000417344 CECR2Q9BXF3 1484 aa8.62□□□□□ -1.03
CCNT1-202ENST00000417344 SOX12O15370 315 aa8.62□□□□□ -1.03
CCNT1-202ENST00000417344 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
CCNT1-202ENST00000417344 CABP2Q9NPB3 220 aa8.61□□□□□ -1.03
CCNT1-202ENST00000417344 WIZO95785 1651 aa8.61□□□□□ -1.03
CCNT1-202ENST00000417344 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
CCNT1-202ENST00000417344 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
CCNT1-202ENST00000417344 BAZ1AQ9NRL2 1556 aaPredicted RBP8.6□□□□□ -1.03
CCNT1-202ENST00000417344 KIF21BO75037 1637 aa8.6□□□□□ -1.03
CCNT1-202ENST00000417344 RAB3GAP2Q9H2M9 1393 aa8.59□□□□□ -1.03
CCNT1-202ENST00000417344 TTLL13PA6NNM8 815 aa8.58□□□□□ -1.04
CCNT1-202ENST00000417344 NLRP6P59044 892 aa8.58□□□□□ -1.04
CCNT1-202ENST00000417344 NCAPD3P42695 1498 aa8.58□□□□□ -1.04
CCNT1-202ENST00000417344 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
CCNT1-202ENST00000417344 BMP2KQ9NSY1 1161 aaPredicted RBP8.58□□□□□ -1.04
CCNT1-202ENST00000417344 TRPC6Q9Y210 931 aa8.58□□□□□ -1.04
CCNT1-202ENST00000417344 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
CCNT1-202ENST00000417344 NPM2Q86SE8 214 aaKnown RBP8.57□□□□□ -1.04
CCNT1-202ENST00000417344 FRAT1Q92837 279 aaPredicted RBP8.57□□□□□ -1.04
CCNT1-202ENST00000417344 MFRPQ9BY79 579 aa8.57□□□□□ -1.04
CCNT1-202ENST00000417344 CCNB3Q8WWL7 1395 aa8.56□□□□□ -1.04
CCNT1-202ENST00000417344 SIN3AQ96ST3 1273 aa8.56□□□□□ -1.04
CCNT1-202ENST00000417344 MKRN3Q13064 507 aaKnown RBP8.56□□□□□ -1.04
CCNT1-202ENST00000417344 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
CCNT1-202ENST00000417344 SMARCA2P51531 1590 aa8.55□□□□□ -1.04
CCNT1-202ENST00000417344 GABBR2O75899 941 aa8.55□□□□□ -1.04
CCNT1-202ENST00000417344 KANK4Q5T7N3 995 aaPredicted RBP8.55□□□□□ -1.04
CCNT1-202ENST00000417344 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
CCNT1-202ENST00000417344 FBXO22Q8NEZ5 403 aa8.54□□□□□ -1.04
CCNT1-202ENST00000417344 RRP9O43818 475 aaKnown RBP8.53□□□□□ -1.04
CCNT1-202ENST00000417344 NFKBIBQ15653 356 aa8.53□□□□□ -1.04
CCNT1-202ENST00000417344 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
CCNT1-202ENST00000417344 TRIM35Q9UPQ4 493 aa8.52□□□□□ -1.05
CCNT1-202ENST00000417344 IER5LQ5T953 404 aa8.51□□□□□ -1.05
CCNT1-202ENST00000417344 PHF8Q9UPP1 1060 aa8.51□□□□□ -1.05
CCNT1-202ENST00000417344 PEG3Q9GZU2 1588 aa8.51□□□□□ -1.05
CCNT1-202ENST00000417344 SETD5Q9C0A6 1442 aa8.51□□□□□ -1.05
CCNT1-202ENST00000417344 TCERG1O14776 1098 aaKnown RBP8.51□□□□□ -1.05
CCNT1-202ENST00000417344 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
CCNT1-202ENST00000417344 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
CCNT1-202ENST00000417344 DCAF11Q8TEB1 546 aa8.51□□□□□ -1.05
CCNT1-202ENST00000417344 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
CCNT1-202ENST00000417344 RNF123Q5XPI4 1314 aa8.5□□□□□ -1.05
CCNT1-202ENST00000417344 PDE4AP27815 886 aa8.5□□□□□ -1.05
CCNT1-202ENST00000417344 ILDR1Q86SU0 546 aaPredicted RBP8.5□□□□□ -1.05
CCNT1-202ENST00000417344 SP7Q8TDD2 431 aaPredicted RBP8.5□□□□□ -1.05
CCNT1-202ENST00000417344 RAPGEF2Q9Y4G8 1499 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms