RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 POGZQ7Z3K3 1410 aa35.68■■■■□ 3.3
COL9A2-203ENST00000417105 ARHGAP5Q13017 1502 aa35.67■■■■□ 3.3
COL9A2-203ENST00000417105 YEATS2Q9ULM3 1422 aa35.66■■■■□ 3.3
COL9A2-203ENST00000417105 ZFYVE16Q7Z3T8 1539 aa35.65■■■■□ 3.3
COL9A2-203ENST00000417105 ADAMTSL3P82987 1691 aa35.65■■■■□ 3.3
COL9A2-203ENST00000417105 BCORL1Q5H9F3 1711 aa35.62■■■■□ 3.29
COL9A2-203ENST00000417105 MAGI2Q86UL8 1455 aa35.61■■■■□ 3.29
COL9A2-203ENST00000417105 HECW2Q9P2P5 1572 aa35.58■■■■□ 3.29
COL9A2-203ENST00000417105 PTPRMP28827 1452 aa35.56■■■■□ 3.28
COL9A2-203ENST00000417105 CDC42BPBQ9Y5S2 1711 aa35.56■■■■□ 3.28
COL9A2-203ENST00000417105 CEP162Q5TB80 1403 aa35.54■■■■□ 3.28
COL9A2-203ENST00000417105 MADDQ8WXG6 1647 aa35.54■■■■□ 3.28
COL9A2-203ENST00000417105 PREX2Q70Z35 1606 aa35.53■■■■□ 3.28
COL9A2-203ENST00000417105 AFAP1Q8N556 730 aa35.51■■■■□ 3.28
COL9A2-203ENST00000417105 ZNF518AQ6AHZ1 1483 aa35.51■■■■□ 3.28
COL9A2-203ENST00000417105 SIGLEC1Q9BZZ2 1709 aa35.51■■■■□ 3.27
COL9A2-203ENST00000417105 ATP10AO60312 1499 aa35.46■■■■□ 3.27
COL9A2-203ENST00000417105 CDC42BPAQ5VT25 1732 aa35.45■■■■□ 3.27
COL9A2-203ENST00000417105 KDM5CP41229 1560 aa35.44■■■■□ 3.26
COL9A2-203ENST00000417105 MLECQ14165 292 aa35.44■■■■□ 3.26
COL9A2-203ENST00000417105 MYT1LQ9UL68 1186 aa35.44■■■■□ 3.26
COL9A2-203ENST00000417105 ABCC1P33527 1531 aa35.42■■■■□ 3.26
COL9A2-203ENST00000417105 RIMS1Q86UR5 1692 aaKnown RBP35.42■■■■□ 3.26
COL9A2-203ENST00000417105 ARHGEF12Q9NZN5 1544 aa35.42■■■■□ 3.26
COL9A2-203ENST00000417105 C9orf84Q5VXU9 1444 aa35.41■■■■□ 3.26
COL9A2-203ENST00000417105 LOC105371045A0A1W2PR82 267 aa35.41■■■■□ 3.26
COL9A2-203ENST00000417105 TRAPPC8Q9Y2L5 1435 aa35.4■■■■□ 3.26
COL9A2-203ENST00000417105 MTUS2Q5JR59 1369 aa35.39■■■■□ 3.26
COL9A2-203ENST00000417105 ZNF777Q9ULD5 760 aaPredicted RBP35.38■■■■□ 3.25
COL9A2-203ENST00000417105 GPATCH8Q9UKJ3 1502 aaKnown RBP35.37■■■■□ 3.25
COL9A2-203ENST00000417105 ITSN2Q9NZM3 1697 aa35.36■■■■□ 3.25
COL9A2-203ENST00000417105 PLPPR3Q6T4P5 718 aa35.33■■■■□ 3.25
COL9A2-203ENST00000417105 MLH3Q9UHC1 1453 aa35.32■■■■□ 3.24
COL9A2-203ENST00000417105 DIP2CQ9Y2E4 1556 aa35.31■■■■□ 3.24
COL9A2-203ENST00000417105 CCNB3Q8WWL7 1395 aa35.31■■■■□ 3.24
COL9A2-203ENST00000417105 SAMD9LQ8IVG5 1584 aa35.3■■■■□ 3.24
COL9A2-203ENST00000417105 CFDP1Q9UEE9 299 aaPredicted RBP35.28■■■■□ 3.24
COL9A2-203ENST00000417105 ABCA6Q8N139 1617 aa35.27■■■■□ 3.24
COL9A2-203ENST00000417105 EHBP1L1Q8N3D4 1523 aa35.26■■■■□ 3.23
COL9A2-203ENST00000417105 FER1L4A9Z1Z3 1794 aa35.25■■■■□ 3.23
COL9A2-203ENST00000417105 SYCP2Q9BX26 1530 aa35.25■■■■□ 3.23
COL9A2-203ENST00000417105 HNRNPMP52272 730 aaKnown RBP eCLIP35.24■■■■□ 3.23
COL9A2-203ENST00000417105 REREQ9P2R6 1566 aa35.21■■■■□ 3.23
COL9A2-203ENST00000417105 KIDINS220Q9ULH0 1771 aa35.19■■■■□ 3.22
COL9A2-203ENST00000417105 TIAM1Q13009 1591 aa35.18■■■■□ 3.22
COL9A2-203ENST00000417105 LMTK3Q96Q04 1460 aa35.17■■■■□ 3.22
COL9A2-203ENST00000417105 PLEKHH2Q8IVE3 1493 aa35.16■■■■□ 3.22
COL9A2-203ENST00000417105 KIAA1107Q9UPP5 1409 aa35.16■■■■□ 3.22
COL9A2-203ENST00000417105 SPAG9O60271 1321 aaKnown RBP35.15■■■■□ 3.22
COL9A2-203ENST00000417105 VPS8Q8N3P4 1428 aa35.14■■■■□ 3.22
COL9A2-203ENST00000417105 ZNF644Q9H582 1327 aaPredicted RBP35.11■■■■□ 3.21
COL9A2-203ENST00000417105 AGLP35573 1532 aa35.11■■■■□ 3.21
COL9A2-203ENST00000417105 CEBPAP49715 358 aaPredicted RBP35.09■■■■□ 3.21
COL9A2-203ENST00000417105 NCOA2Q15596 1464 aa35.06■■■■□ 3.2
COL9A2-203ENST00000417105 HSPA2P54652 639 aa35.05■■■■□ 3.2
COL9A2-203ENST00000417105 ATP7AQ04656 1500 aa35.05■■■■□ 3.2
COL9A2-203ENST00000417105 SUPT6HQ7KZ85 1726 aaKnown RBP35.04■■■■□ 3.2
COL9A2-203ENST00000417105 INO80Q9ULG1 1556 aaPredicted RBP35.01■■■■□ 3.2
COL9A2-203ENST00000417105 ESF1Q9H501 851 aaKnown RBP35■■■■□ 3.19
COL9A2-203ENST00000417105 MBD5Q9P267 1494 aa34.99■■■■□ 3.19
COL9A2-203ENST00000417105 LRRC9Q6ZRR7 1453 aa34.97■■■■□ 3.19
COL9A2-203ENST00000417105 ILDR1Q86SU0 546 aaPredicted RBP34.95■■■■□ 3.19
COL9A2-203ENST00000417105 A2MP01023 1474 aa34.93■■■■□ 3.18
COL9A2-203ENST00000417105 CAMSAP2Q08AD1 1489 aa34.91■■■■□ 3.18
COL9A2-203ENST00000417105 KANK4Q5T7N3 995 aaPredicted RBP34.91■■■■□ 3.18
COL9A2-203ENST00000417105 C3P01024 1663 aa34.89■■■■□ 3.18
COL9A2-203ENST00000417105 PREX1Q8TCU6 1659 aa34.89■■■■□ 3.18
COL9A2-203ENST00000417105 PLXNC1O60486 1568 aa34.89■■■■□ 3.18
COL9A2-203ENST00000417105 MAP3K1Q13233 1512 aa34.87■■■■□ 3.17
COL9A2-203ENST00000417105 CNTLNQ9NXG0 1405 aa34.87■■■■□ 3.17
COL9A2-203ENST00000417105 RTEL1-TNFRSF6BF6WH68 1400 aa34.85■■■■□ 3.17
COL9A2-203ENST00000417105 CCDC141Q6ZP82 1450 aa34.84■■■■□ 3.17
COL9A2-203ENST00000417105 ADGBQ8N7X0 1667 aa34.83■■■■□ 3.17
COL9A2-203ENST00000417105 UHRF1BP1Q6BDS2 1440 aa34.83■■■■□ 3.17
COL9A2-203ENST00000417105 GGT6Q6P531 493 aa34.81■■■■□ 3.16
COL9A2-203ENST00000417105 RSPH4AQ5TD94 716 aa34.79■■■■□ 3.16
COL9A2-203ENST00000417105 SETD1BQ9UPS6 1966 aaKnown RBP34.78■■■■□ 3.16
COL9A2-203ENST00000417105 ZMYM3Q14202 1370 aa34.75■■■■□ 3.15
COL9A2-203ENST00000417105 DHX29Q7Z478 1369 aaKnown RBP34.75■■■■□ 3.15
COL9A2-203ENST00000417105 MROH2AA6NES4 1674 aa34.74■■■■□ 3.15
COL9A2-203ENST00000417105 APLP2Q06481 763 aa34.74■■■■□ 3.15
COL9A2-203ENST00000417105 ARHGEF5Q12774 1597 aa34.74■■■■□ 3.15
COL9A2-203ENST00000417105 CLTCQ00610 1675 aaKnown RBP34.73■■■■□ 3.15
COL9A2-203ENST00000417105 TSPY4P0CV99 314 aa34.7■■■■□ 3.15
COL9A2-203ENST00000417105 TSPY10P0CW01 314 aa34.7■■■■□ 3.15
COL9A2-203ENST00000417105 MYOM3Q5VTT5 1437 aa34.7■■■■□ 3.15
COL9A2-203ENST00000417105 NPATQ14207 1427 aa34.66■■■■□ 3.14
COL9A2-203ENST00000417105 MIA2Q96PC5 1412 aa34.66■■■■□ 3.14
COL9A2-203ENST00000417105 KIF3BO15066 747 aa34.66■■■■□ 3.14
COL9A2-203ENST00000417105 PPP6R1Q9UPN7 881 aa34.66■■■■□ 3.14
COL9A2-203ENST00000417105 STRCQ7RTU9 1775 aa34.61■■■■□ 3.13
COL9A2-203ENST00000417105 PTPRKQ15262 1439 aa34.58■■■■□ 3.13
COL9A2-203ENST00000417105 FBXO41Q8TF61 875 aa34.58■■■■□ 3.13
COL9A2-203ENST00000417105 MAST1Q9Y2H9 1570 aa34.56■■■■□ 3.12
COL9A2-203ENST00000417105 DMRT2Q9Y5R5 561 aa34.55■■■■□ 3.12
COL9A2-203ENST00000417105 KDM5DQ9BY66 1539 aa34.49■■■■□ 3.11
COL9A2-203ENST00000417105 WASHC2CQ9Y4E1 1318 aa34.49■■■■□ 3.11
COL9A2-203ENST00000417105 MYO3AQ8NEV4 1616 aa34.48■■■■□ 3.11
COL9A2-203ENST00000417105 PTPN23Q9H3S7 1636 aa34.48■■■■□ 3.11
COL9A2-203ENST00000417105 NCOA1Q15788 1441 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms