RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 ABCB7O75027 752 aa13.69□□□□□ -0.22
ITGA6-205ENST00000416789 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
ITGA6-205ENST00000416789 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
ITGA6-205ENST00000416789 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
ITGA6-205ENST00000416789 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
ITGA6-205ENST00000416789 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
ITGA6-205ENST00000416789 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
ITGA6-205ENST00000416789 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
ITGA6-205ENST00000416789 LRRIQ1Q96JM4 1722 aa13.65□□□□□ -0.22
ITGA6-205ENST00000416789 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
ITGA6-205ENST00000416789 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
ITGA6-205ENST00000416789 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
ITGA6-205ENST00000416789 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
ITGA6-205ENST00000416789 CDK13Q14004 1512 aaKnown RBP13.61□□□□□ -0.23
ITGA6-205ENST00000416789 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
ITGA6-205ENST00000416789 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
ITGA6-205ENST00000416789 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
ITGA6-205ENST00000416789 KIF14Q15058 1648 aa13.6□□□□□ -0.23
ITGA6-205ENST00000416789 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
ITGA6-205ENST00000416789 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-205ENST00000416789 KDM6BO15054 1643 aa13.59□□□□□ -0.23
ITGA6-205ENST00000416789 MYO5CQ9NQX4 1742 aa13.59□□□□□ -0.23
ITGA6-205ENST00000416789 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
ITGA6-205ENST00000416789 NEO1Q92859 1461 aa13.57□□□□□ -0.24
ITGA6-205ENST00000416789 MAP3K1Q13233 1512 aa13.57□□□□□ -0.24
ITGA6-205ENST00000416789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
ITGA6-205ENST00000416789 ARID3CA6NKF2 412 aa13.56□□□□□ -0.24
ITGA6-205ENST00000416789 POLA2Q14181 598 aa13.55□□□□□ -0.24
ITGA6-205ENST00000416789 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.25
ITGA6-205ENST00000416789 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.25
ITGA6-205ENST00000416789 PLCH2O75038 1416 aa13.51□□□□□ -0.25
ITGA6-205ENST00000416789 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
ITGA6-205ENST00000416789 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
ITGA6-205ENST00000416789 MTUS2Q5JR59 1369 aa13.49□□□□□ -0.25
ITGA6-205ENST00000416789 SUPT6HQ7KZ85 1726 aaKnown RBP13.49□□□□□ -0.25
ITGA6-205ENST00000416789 FANCAO15360 1455 aa13.48□□□□□ -0.25
ITGA6-205ENST00000416789 CDC42BPAQ5VT25 1732 aa13.48□□□□□ -0.25
ITGA6-205ENST00000416789 CDC42BPBQ9Y5S2 1711 aa13.48□□□□□ -0.25
ITGA6-205ENST00000416789 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
ITGA6-205ENST00000416789 EFCAB2Q5VUJ9 269 aa13.46□□□□□ -0.25
ITGA6-205ENST00000416789 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
ITGA6-205ENST00000416789 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
ITGA6-205ENST00000416789 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
ITGA6-205ENST00000416789 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
ITGA6-205ENST00000416789 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
ITGA6-205ENST00000416789 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
ITGA6-205ENST00000416789 MAGI2Q86UL8 1455 aa13.42□□□□□ -0.26
ITGA6-205ENST00000416789 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
ITGA6-205ENST00000416789 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
ITGA6-205ENST00000416789 COL17A1Q9UMD9 1497 aaPredicted RBP13.41□□□□□ -0.26
ITGA6-205ENST00000416789 ZMYM4Q5VZL5 1548 aa13.4□□□□□ -0.26
ITGA6-205ENST00000416789 GPATCH8Q9UKJ3 1502 aaKnown RBP13.39□□□□□ -0.27
ITGA6-205ENST00000416789 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
ITGA6-205ENST00000416789 ABCC1P33527 1531 aa13.38□□□□□ -0.27
ITGA6-205ENST00000416789 KIAA1107Q9UPP5 1409 aa13.38□□□□□ -0.27
ITGA6-205ENST00000416789 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
ITGA6-205ENST00000416789 NCOA2Q15596 1464 aa13.37□□□□□ -0.27
ITGA6-205ENST00000416789 POGZQ7Z3K3 1410 aa13.37□□□□□ -0.27
ITGA6-205ENST00000416789 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
ITGA6-205ENST00000416789 KDM5CP41229 1560 aa13.36□□□□□ -0.27
ITGA6-205ENST00000416789 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
ITGA6-205ENST00000416789 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
ITGA6-205ENST00000416789 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
ITGA6-205ENST00000416789 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
ITGA6-205ENST00000416789 MIA2Q96PC5 1412 aa13.33□□□□□ -0.28
ITGA6-205ENST00000416789 ZFYVE16Q7Z3T8 1539 aa13.32□□□□□ -0.28
ITGA6-205ENST00000416789 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
ITGA6-205ENST00000416789 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
ITGA6-205ENST00000416789 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
ITGA6-205ENST00000416789 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
ITGA6-205ENST00000416789 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
ITGA6-205ENST00000416789 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
ITGA6-205ENST00000416789 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
ITGA6-205ENST00000416789 ARHGEF5Q12774 1597 aa13.28□□□□□ -0.28
ITGA6-205ENST00000416789 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.29
ITGA6-205ENST00000416789 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
ITGA6-205ENST00000416789 ATP10AO60312 1499 aa13.26□□□□□ -0.29
ITGA6-205ENST00000416789 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
ITGA6-205ENST00000416789 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
ITGA6-205ENST00000416789 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
ITGA6-205ENST00000416789 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
ITGA6-205ENST00000416789 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
ITGA6-205ENST00000416789 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
ITGA6-205ENST00000416789 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
ITGA6-205ENST00000416789 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
ITGA6-205ENST00000416789 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
ITGA6-205ENST00000416789 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
ITGA6-205ENST00000416789 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
ITGA6-205ENST00000416789 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
ITGA6-205ENST00000416789 AFAP1Q8N556 730 aa13.23□□□□□ -0.29
ITGA6-205ENST00000416789 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
ITGA6-205ENST00000416789 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
ITGA6-205ENST00000416789 SPAG9O60271 1321 aaKnown RBP13.22□□□□□ -0.29
ITGA6-205ENST00000416789 MAST1Q9Y2H9 1570 aa13.22□□□□□ -0.29
ITGA6-205ENST00000416789 AGLP35573 1532 aa13.22□□□□□ -0.29
ITGA6-205ENST00000416789 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
ITGA6-205ENST00000416789 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
ITGA6-205ENST00000416789 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
ITGA6-205ENST00000416789 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.3
ITGA6-205ENST00000416789 TSPY4P0CV99 314 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms