RNA–Protein interactions for RNA: ENST00000416784.5

LPP-203, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-203ENST00000416784 DENND4BO75064 1496 aaPredicted RBP13.78□□□□□ -0.2
LPP-203ENST00000416784 CCDC18Q5T9S5 1454 aa13.78□□□□□ -0.2
LPP-203ENST00000416784 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
LPP-203ENST00000416784 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
LPP-203ENST00000416784 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
LPP-203ENST00000416784 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
LPP-203ENST00000416784 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
LPP-203ENST00000416784 FRMPD1Q5SYB0 1578 aa13.74□□□□□ -0.21
LPP-203ENST00000416784 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
LPP-203ENST00000416784 PLCH2O75038 1416 aa13.73□□□□□ -0.21
LPP-203ENST00000416784 RICTORQ6R327 1708 aa13.73□□□□□ -0.21
LPP-203ENST00000416784 ARHGAP5Q13017 1502 aa13.73□□□□□ -0.21
LPP-203ENST00000416784 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
LPP-203ENST00000416784 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
LPP-203ENST00000416784 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
LPP-203ENST00000416784 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
LPP-203ENST00000416784 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
LPP-203ENST00000416784 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
LPP-203ENST00000416784 ZMYM4Q5VZL5 1548 aa13.67□□□□□ -0.22
LPP-203ENST00000416784 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
LPP-203ENST00000416784 PREX2Q70Z35 1606 aa13.66□□□□□ -0.22
LPP-203ENST00000416784 BCORL1Q5H9F3 1711 aa13.65□□□□□ -0.22
LPP-203ENST00000416784 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
LPP-203ENST00000416784 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
LPP-203ENST00000416784 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
LPP-203ENST00000416784 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
LPP-203ENST00000416784 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
LPP-203ENST00000416784 CDC42BPAQ5VT25 1732 aa13.62□□□□□ -0.23
LPP-203ENST00000416784 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
LPP-203ENST00000416784 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
LPP-203ENST00000416784 YEATS2Q9ULM3 1422 aa13.62□□□□□ -0.23
LPP-203ENST00000416784 RIMS1Q86UR5 1692 aaKnown RBP13.61□□□□□ -0.23
LPP-203ENST00000416784 KANK4Q5T7N3 995 aaPredicted RBP13.61□□□□□ -0.23
LPP-203ENST00000416784 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
LPP-203ENST00000416784 MLECQ14165 292 aa13.6□□□□□ -0.23
LPP-203ENST00000416784 HECW2Q9P2P5 1572 aa13.6□□□□□ -0.23
LPP-203ENST00000416784 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
LPP-203ENST00000416784 ABCC1P33527 1531 aa13.59□□□□□ -0.23
LPP-203ENST00000416784 CCNB3Q8WWL7 1395 aa13.59□□□□□ -0.23
LPP-203ENST00000416784 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
LPP-203ENST00000416784 PTPRMP28827 1452 aa13.59□□□□□ -0.23
LPP-203ENST00000416784 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
LPP-203ENST00000416784 TIAM1Q13009 1591 aa13.58□□□□□ -0.23
LPP-203ENST00000416784 ATP10AO60312 1499 aa13.58□□□□□ -0.24
LPP-203ENST00000416784 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
LPP-203ENST00000416784 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
LPP-203ENST00000416784 KDM5CP41229 1560 aa13.57□□□□□ -0.24
LPP-203ENST00000416784 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
LPP-203ENST00000416784 CFDP1Q9UEE9 299 aaPredicted RBP13.56□□□□□ -0.24
LPP-203ENST00000416784 LRRC9Q6ZRR7 1453 aa13.55□□□□□ -0.24
LPP-203ENST00000416784 SAMD9LQ8IVG5 1584 aa13.54□□□□□ -0.24
LPP-203ENST00000416784 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
LPP-203ENST00000416784 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
LPP-203ENST00000416784 GPATCH8Q9UKJ3 1502 aaKnown RBP13.54□□□□□ -0.24
LPP-203ENST00000416784 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
LPP-203ENST00000416784 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
LPP-203ENST00000416784 TRAPPC8Q9Y2L5 1435 aa13.53□□□□□ -0.24
LPP-203ENST00000416784 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
LPP-203ENST00000416784 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
LPP-203ENST00000416784 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
LPP-203ENST00000416784 MLH3Q9UHC1 1453 aa13.52□□□□□ -0.25
LPP-203ENST00000416784 ARHGEF12Q9NZN5 1544 aa13.51□□□□□ -0.25
LPP-203ENST00000416784 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■■■□ 21.3
LPP-203ENST00000416784 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
LPP-203ENST00000416784 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
LPP-203ENST00000416784 KIDINS220Q9ULH0 1771 aa13.48□□□□□ -0.25
LPP-203ENST00000416784 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
LPP-203ENST00000416784 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
LPP-203ENST00000416784 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
LPP-203ENST00000416784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
LPP-203ENST00000416784 AGLP35573 1532 aa13.44□□□□□ -0.26
LPP-203ENST00000416784 INO80Q9ULG1 1556 aaPredicted RBP13.43□□□□□ -0.26
LPP-203ENST00000416784 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
LPP-203ENST00000416784 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
LPP-203ENST00000416784 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
LPP-203ENST00000416784 LMTK3Q96Q04 1460 aa13.42□□□□□ -0.26
LPP-203ENST00000416784 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
LPP-203ENST00000416784 PREX1Q8TCU6 1659 aa13.41□□□□□ -0.26
LPP-203ENST00000416784 A2MP01023 1474 aa13.41□□□□□ -0.26
LPP-203ENST00000416784 KCNA4P22459 653 aa13.4□□□□□ -0.26
LPP-203ENST00000416784 CEBPAP49715 358 aaPredicted RBP13.4□□□□□ -0.26
LPP-203ENST00000416784 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
LPP-203ENST00000416784 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
LPP-203ENST00000416784 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
LPP-203ENST00000416784 C3P01024 1663 aa13.39□□□□□ -0.27
LPP-203ENST00000416784 HSPA2P54652 639 aa13.38□□□□□ -0.27
LPP-203ENST00000416784 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
LPP-203ENST00000416784 UHRF1BP1Q6BDS2 1440 aa13.38□□□□□ -0.27
LPP-203ENST00000416784 TSPY4P0CV99 314 aa13.37□□□□□ -0.27
LPP-203ENST00000416784 TSPY10P0CW01 314 aa13.37□□□□□ -0.27
LPP-203ENST00000416784 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
LPP-203ENST00000416784 GGT6Q6P531 493 aa13.37□□□□□ -0.27
LPP-203ENST00000416784 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
LPP-203ENST00000416784 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
LPP-203ENST00000416784 PLXNC1O60486 1568 aa13.36□□□□□ -0.27
LPP-203ENST00000416784 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
LPP-203ENST00000416784 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
LPP-203ENST00000416784 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
LPP-203ENST00000416784 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
LPP-203ENST00000416784 FGD6Q6ZV73 1430 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms