RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 RNF25Q96BH1 459 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-203ENST00000416690 ZFP91Q96JP5 570 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-203ENST00000416690 PHF8Q9UPP1 1060 aa5.94□□□□□ -1.46
GTF3C3-203ENST00000416690 VGFO15240 615 aaPredicted RBP5.93□□□□□ -1.46
GTF3C3-203ENST00000416690 MYT1LQ9UL68 1186 aa5.92□□□□□ -1.46
GTF3C3-203ENST00000416690 ARSIQ5FYB1 569 aa5.9□□□□□ -1.46
GTF3C3-203ENST00000416690 NLRP6P59044 892 aa5.88□□□□□ -1.47
GTF3C3-203ENST00000416690 ZNF316A6NFI3 1004 aaPredicted RBP5.87□□□□□ -1.47
GTF3C3-203ENST00000416690 PTGER2P43116 358 aa5.87□□□□□ -1.47
GTF3C3-203ENST00000416690 FBXO22Q8NEZ5 403 aa5.87□□□□□ -1.47
GTF3C3-203ENST00000416690 KHSRPQ92945 711 aaKnown RBP eCLIP5.87□□□□□ -1.473e-6■■■■□ 22
GTF3C3-203ENST00000416690 ANKRD13DQ6ZTN6 518 aa5.86□□□□□ -1.47
GTF3C3-203ENST00000416690 BCL11BQ9C0K0 894 aaPredicted RBP5.85□□□□□ -1.47
GTF3C3-203ENST00000416690 KIF3CO14782 793 aa5.84□□□□□ -1.47
GTF3C3-203ENST00000416690 TAOK2Q9UL54 1235 aa5.84□□□□□ -1.47
GTF3C3-203ENST00000416690 LSM11P83369 360 aaKnown RBP eCLIP5.83□□□□□ -1.48
GTF3C3-203ENST00000416690 MFRPQ9BY79 579 aa5.83□□□□□ -1.48
GTF3C3-203ENST00000416690 STK24Q9Y6E0 443 aa5.83□□□□□ -1.48
GTF3C3-203ENST00000416690 C2orf72A6NCS6 295 aa5.82□□□□□ -1.48
GTF3C3-203ENST00000416690 NUDT7P0C024 238 aa5.81□□□□□ -1.48
GTF3C3-203ENST00000416690 STK25O00506 426 aa5.79□□□□□ -1.48
GTF3C3-203ENST00000416690 SLC34A2O95436 690 aa5.79□□□□□ -1.48
GTF3C3-203ENST00000416690 PBX2P40425 430 aa5.79□□□□□ -1.48
GTF3C3-203ENST00000416690 POTEEQ6S8J3 1075 aa5.79□□□□□ -1.48
GTF3C3-203ENST00000416690 LHX6Q9UPM6 363 aa5.79□□□□□ -1.48
GTF3C3-203ENST00000416690 PCDHGA4Q9Y5G9 962 aa5.79□□□□□ -1.48
GTF3C3-203ENST00000416690 AXIN2Q9Y2T1 843 aa5.77□□□□□ -1.49
GTF3C3-203ENST00000416690 ECM2O94769 699 aaPredicted RBP5.76□□□□□ -1.49
GTF3C3-203ENST00000416690 TMC2Q8TDI7 906 aa5.76□□□□□ -1.49
GTF3C3-203ENST00000416690 HCSTQ9UBK5 93 aa5.73□□□□□ -1.49
GTF3C3-203ENST00000416690 KDM4FA0A1W2PPD8 638 aa5.72□□□□□ -1.49
GTF3C3-203ENST00000416690 PSDA5PKW4 1024 aaPredicted RBP5.72□□□□□ -1.49
GTF3C3-203ENST00000416690 ARHGAP33O14559 1287 aa5.72□□□□□ -1.49
GTF3C3-203ENST00000416690 PPP1R37O75864 691 aa5.72□□□□□ -1.49
GTF3C3-203ENST00000416690 ADGRD1Q6QNK2 874 aa5.72□□□□□ -1.49
GTF3C3-203ENST00000416690 PLA2G2EQ9NZK7 142 aa5.72□□□□□ -1.49
GTF3C3-203ENST00000416690 RGL2O15211 777 aa5.71□□□□□ -1.5
GTF3C3-203ENST00000416690 PKD2Q13563 968 aa5.7□□□□□ -1.5
GTF3C3-203ENST00000416690 PTCD2Q8WV60 388 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-203ENST00000416690 TK2O00142 265 aa5.69□□□□□ -1.5
GTF3C3-203ENST00000416690 HRO43593 1189 aa5.68□□□□□ -1.5
GTF3C3-203ENST00000416690 PSEN2P49810 448 aa5.68□□□□□ -1.5
GTF3C3-203ENST00000416690 FOXK1P85037 733 aa5.68□□□□□ -1.5
GTF3C3-203ENST00000416690 DMRTA1Q5VZB9 504 aa5.68□□□□□ -1.5
GTF3C3-203ENST00000416690 PLPP6Q8IY26 295 aa5.67□□□□□ -1.5
GTF3C3-203ENST00000416690 GPHNQ9NQX3 736 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-203ENST00000416690 TBC1D12O60347 775 aa5.65□□□□□ -1.5
GTF3C3-203ENST00000416690 PPP4R3BQ5MIZ7 849 aa5.65□□□□□ -1.5
GTF3C3-203ENST00000416690 DSG2Q14126 1118 aa5.63□□□□□ -1.51
GTF3C3-203ENST00000416690 KCTD12Q96CX2 325 aaKnown RBP5.63□□□□□ -1.51
GTF3C3-203ENST00000416690 STAC3Q96MF2 364 aa5.63□□□□□ -1.51
GTF3C3-203ENST00000416690 KCNH8Q96L42 1107 aa5.6□□□□□ -1.51
GTF3C3-203ENST00000416690 KCNK17Q96T54 332 aa5.6□□□□□ -1.51
GTF3C3-203ENST00000416690 VPS9D1Q9Y2B5 631 aa5.6□□□□□ -1.51
GTF3C3-203ENST00000416690 HS6ST3Q8IZP7 471 aa5.59□□□□□ -1.51
GTF3C3-203ENST00000416690 OXER1Q8TDS5 423 aa5.59□□□□□ -1.51
GTF3C3-203ENST00000416690 PTPN5P54829 565 aa5.58□□□□□ -1.52
GTF3C3-203ENST00000416690 ZNF454Q8N9F8 522 aa5.57□□□□□ -1.52
GTF3C3-203ENST00000416690 UPF1Q92900 1129 aaKnown RBP eCLIP5.57□□□□□ -1.52
GTF3C3-203ENST00000416690 SLC4A5Q9BY07 1137 aa5.57□□□□□ -1.52
GTF3C3-203ENST00000416690 BCL2L12Q9HB09 334 aa5.57□□□□□ -1.52
GTF3C3-203ENST00000416690 BHMG1C9JSJ3 638 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-203ENST00000416690 IFFO2Q5TF58 517 aa5.56□□□□□ -1.52
GTF3C3-203ENST00000416690 CHGAP10645 457 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-203ENST00000416690 CRISPLD2Q9H0B8 497 aa5.55□□□□□ -1.52
GTF3C3-203ENST00000416690 RGS20O76081 388 aa5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 PTPREP23469 700 aa5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 FOSBP53539 338 aa5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 THSD4Q6ZMP0 1018 aa5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 ZBED2Q9BTP6 218 aa5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 DNAJC5Q9H3Z4 198 aa5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 ANO8Q9HCE9 1232 aaPredicted RBP5.54□□□□□ -1.52
GTF3C3-203ENST00000416690 NKX1-1Q15270 411 aaPredicted RBP5.53□□□□□ -1.52
GTF3C3-203ENST00000416690 PPP1R15BQ5SWA1 713 aa5.53□□□□□ -1.52
GTF3C3-203ENST00000416690 GOLGA8CPA6NN73 597 aa5.52□□□□□ -1.53
GTF3C3-203ENST00000416690 WNT2BQ93097 391 aa5.52□□□□□ -1.53
GTF3C3-203ENST00000416690 PDE4AP27815 886 aa5.51□□□□□ -1.53
GTF3C3-203ENST00000416690 MRPL50Q8N5N7 158 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-203ENST00000416690 ZDHHC16Q969W1 377 aa5.51□□□□□ -1.53
GTF3C3-203ENST00000416690 JPH4Q96JJ6 628 aa5.51□□□□□ -1.53
GTF3C3-203ENST00000416690 RYDENQ9NUL5 291 aaKnown RBP5.51□□□□□ -1.53
GTF3C3-203ENST00000416690 A0A0G2JS52 829 aa5.5□□□□□ -1.53
GTF3C3-203ENST00000416690 EVI5O60447 810 aa5.5□□□□□ -1.53
GTF3C3-203ENST00000416690 ADAM33Q9BZ11 813 aa5.5□□□□□ -1.53
GTF3C3-203ENST00000416690 NCKAP5LQ9HCH0 1330 aa5.49□□□□□ -1.53
GTF3C3-203ENST00000416690 IRX2Q9BZI1 471 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-203ENST00000416690 NBPF3Q9H094 633 aa5.49□□□□□ -1.53
GTF3C3-203ENST00000416690 MAP3K9P80192 1104 aa5.46□□□□□ -1.54
GTF3C3-203ENST00000416690 LARP6Q9BRS8 491 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-203ENST00000416690 PPP1R3GB7ZBB8 358 aa5.45□□□□□ -1.54
GTF3C3-203ENST00000416690 DDX27Q96GQ7 796 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-203ENST00000416690 RABGEF1Q9UJ41 708 aa5.45□□□□□ -1.54
GTF3C3-203ENST00000416690 GTPBP6O43824 516 aaPredicted RBP5.44□□□□□ -1.54
GTF3C3-203ENST00000416690 MFSD10Q14728 455 aa5.44□□□□□ -1.54
GTF3C3-203ENST00000416690 PROX2Q3B8N5 592 aa5.44□□□□□ -1.54
GTF3C3-203ENST00000416690 PCDHGA10Q9Y5H3 936 aa5.44□□□□□ -1.54
GTF3C3-203ENST00000416690 ITGBL1O95965 494 aaPredicted RBP5.43□□□□□ -1.54
GTF3C3-203ENST00000416690 COL9A1P20849 921 aa5.43□□□□□ -1.54
GTF3C3-203ENST00000416690 ANKK1Q8NFD2 765 aa5.43□□□□□ -1.54
GTF3C3-203ENST00000416690 EMILIN3Q9NT22 766 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms